Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02838 Sequoiadendron giganteum HOM05D007826 ORTHO05D009921 6.8e-90 334.0 166 100.0
TAR636G3365 Trochodendron aralioides HOM05D007826 ORTHO05D009921 2.5e-36 156.0 133 56.4
ATR0307G128 Amborella trichopoda HOM05D007826 ORTHO05D009921 3.3e-36 155.6 134 59.0
MBI13_g00897_MAGBIO Magnolia biondii HOM05D007826 ORTHO05D009921 9.0e-34 147.5 138 51.4
Dinv02119 Davidia involucrata HOM05D007826 ORTHO05D009921 1.5e-33 146.7 137 50.4
CSS0030848 Camellia sinensis var. sinensis HOM05D007826 ORTHO05D009921 5.8e-33 144.8 134 53.0
CSS0043932 Camellia sinensis var. sinensis HOM05D007826 ORTHO05D009921 5.8e-33 144.8 134 53.0
Duzib114G0936 Durio zibethinus HOM05D007826 ORTHO05D009921 5.8e-33 144.8 148 48.6
RcHm_v2.0_Chr1g0328201 Rosa chinensis HOM05D007826 ORTHO05D009921 7.6e-33 144.4 132 52.3
Thecc.10G138900 Theobroma cacao HOM05D007826 ORTHO05D009921 1.0e-32 144.1 148 46.6
MD02G1275100 Malus domestica HOM05D007826 ORTHO05D009921 1.3e-32 143.7 137 53.3
Mapoly0060s0066 Marchantia polymorpha HOM05D007826 ORTHO05D009921 1.3e-32 143.7 134 56.0
QL04p021763 Quercus lobata HOM05D007826 ORTHO05D009921 1.3e-32 143.7 131 51.9
Hma1.2p1_0233F.1_g098320 Hydrangea macrophylla HOM05D007826 ORTHO05D009921 1.7e-32 143.3 131 51.9
Nn7g36978 Nelumbo nucifera HOM05D007826 ORTHO05D009921 3.8e-32 142.1 129 51.9
Cfa010966 Carpinus fangiana HOM05D007826 ORTHO05D009921 6.5e-32 141.4 130 53.8
CiPaw.13G016900 Carya illinoinensis HOM05D007826 ORTHO05D009921 1.4e-31 140.2 131 51.1
GSVIVG01036583001 Vitis vinifera HOM05D007826 ORTHO05D009921 1.9e-31 139.8 130 52.3
PSO384G0702 Papaver somniferum HOM05D007826 ORTHO05D009921 3.2e-31 139.0 130 48.5
Haze_02971 Corylus avellana HOM05D007826 ORTHO05D009921 4.2e-31 138.7 130 53.1
PSO339G1114 Papaver somniferum HOM05D007826 ORTHO05D009921 4.2e-31 138.7 130 48.5
Manes.04G155500 Manihot esculenta HOM05D007826 ORTHO05D009921 7.1e-31 137.9 130 48.5
PGR044G2215 Punica granatum HOM05D007826 ORTHO05D009921 7.1e-31 137.9 131 52.7
Rhsim07G0072900 Rhododendron simsii HOM05D007826 ORTHO05D009921 7.1e-31 137.9 132 50.8
vmacro13796 Vaccinium macrocarpon HOM05D007826 ORTHO05D009921 7.1e-31 137.9 132 51.5
Potri.003G192300 Populus trichocarpa HOM05D007826 ORTHO05D009921 9.3e-31 137.5 128 50.8
Atru.chr12.1205 Acer truncatum HOM05D007826 ORTHO05D009921 1.6e-30 136.7 130 50.8
arahy.Tifrunner.gnm1.ann1.B3NFFH Arachis hypogaea HOM05D007826 ORTHO05D009921 1.6e-30 136.7 131 48.9
MELO3C011799.2 Cucumis melo HOM05D007826 ORTHO05D009921 1.6e-30 136.7 131 48.9
Sabra03G0143200 Salix brachista HOM05D007826 ORTHO05D009921 1.6e-30 136.7 128 50.0
Cpa.g.sc228.7 Carica papaya HOM05D007826 ORTHO05D009921 2.7e-30 136.0 131 51.1
ClCG11G013060 Citrullus lanatus HOM05D007826 ORTHO05D009921 2.7e-30 136.0 135 47.4
Glyma.06G310800 Glycine max HOM05D007826 ORTHO05D009921 3.5e-30 135.6 135 50.4
Gohir.A06G174000 Gossypium hirsutum HOM05D007826 ORTHO05D009921 3.5e-30 135.6 153 45.1
Phvul.005G015800 Phaseolus vulgaris HOM05D007826 ORTHO05D009921 3.5e-30 135.6 135 49.6
Sc11g0006210 Simmondsia chinensis HOM05D007826 ORTHO05D009921 4.6e-30 135.2 135 44.4
arahy.Tifrunner.gnm1.ann1.46TCXF Arachis hypogaea HOM05D007826 ORTHO05D009921 7.9e-30 134.4 131 48.1
Gorai.010G215500 Gossypium raimondii HOM05D007826 ORTHO05D009921 7.9e-30 134.4 153 45.1
Manes.11G008600 Manihot esculenta HOM05D007826 ORTHO05D009921 7.9e-30 134.4 130 46.2
Potri.001G032800 Populus trichocarpa HOM05D007826 ORTHO05D009921 7.9e-30 134.4 128 48.4
Sed0024773 Sechium edule HOM05D007826 ORTHO05D009921 1.0e-29 134.0 131 48.9
Gohir.D06G184100 Gossypium hirsutum HOM05D007826 ORTHO05D009921 1.8e-29 133.3 153 45.1
Prupe.2G045900 Prunus persica HOM05D007826 ORTHO05D009921 1.8e-29 133.3 147 46.9
Sabra01G0023300 Salix brachista HOM05D007826 ORTHO05D009921 1.8e-29 133.3 128 47.7
Hund15767 Selenicereus undatus HOM05D007826 ORTHO05D009921 2.3e-29 132.9 135 46.7
Os07g0644600 Oryza sativa ssp. japonica HOM05D007826 ORTHO05D009921 3.0e-29 132.5 130 53.8
VMungo1080G0241 Vigna mungo HOM05D007826 ORTHO05D009921 3.0e-29 132.5 135 49.6
TWI38G1292 Tripterygium wilfordii HOM05D007826 ORTHO05D009921 3.9e-29 132.1 131 48.1
CsaV3_5G029550 Cucumis sativus L. HOM05D007826 ORTHO05D009921 5.1e-29 131.7 131 47.3
Ah.12g064790 Amaranthus hybridus HOM05D007826 ORTHO05D009921 8.7e-29 131.0 135 45.9
Lj3g0023662 Lotus japonicus HOM05D007826 ORTHO05D009921 2.5e-28 129.4 129 50.4
FvH4_7g04131 Fragaria vesca HOM05D007826 ORTHO05D009921 4.3e-28 128.6 131 48.9
Zm00001eb110390 Zea mays HOM05D007826 ORTHO05D009921 4.3e-28 128.6 137 50.4
Ca_14209_v3 Cicer arietinum L. HOM05D007826 ORTHO05D009921 5.7e-28 128.3 131 45.0
AUR62032571 Chenopodium quinoa HOM05D007826 ORTHO05D009921 7.4e-28 127.9 132 44.7
SGA_v2.0_scaffold232G43475 Striga asiatica HOM05D007826 ORTHO05D009921 7.4e-28 127.9 162 45.1
TPR.G9966 Trifolium pratense HOM05D007826 ORTHO05D009921 7.4e-28 127.9 131 45.8
Ciclev10000762m.g Citrus clementina HOM05D007826 ORTHO05D009921 1.3e-27 127.1 139 44.6
EL10Ac2g02721 Beta vulgaris HOM05D007826 ORTHO05D009921 3.7e-27 125.6 132 43.9
Eucgr.J00084 Eucalyptus grandis HOM05D007826 ORTHO05D009921 3.7e-27 125.6 131 45.8
Lalb_Chr15g0079201 Lupinus albus HOM05D007826 ORTHO05D009921 1.8e-26 123.2 131 44.3
Psat5g224040 Pisum sativum HOM05D007826 ORTHO05D009921 6.9e-26 121.3 131 42.0
Migut.N01862 Erythranthe guttata HOM05D007826 ORTHO05D009921 1.2e-25 120.6 123 48.0
MSTRG.5081 Avicennia marina HOM05D007826 ORTHO05D009921 1.0e-24 117.5 123 43.9
AagrBONN_evm.TU.Sc2ySwM_228.4931 Anthoceros agrestis HOM05D007826 ORTHO05D009921 1.7e-24 116.7 131 46.6
THA.LOC104826745 Tarenaya hassleriana HOM05D007826 ORTHO05D009921 1.9e-23 113.2 130 40.8
Oeu014623.2 Olea europaea HOM05D007826 ORTHO05D009921 7.9e-22 107.8 105 45.7
AUR62031690 Chenopodium quinoa HOM05D007826 ORTHO05D009921 2.0e-17 93.2 70 60.0
RcHm_v2.0_Chr5g0059421 Rosa chinensis HOM05D007826 ORTHO05D009921 2.7e-14 82.8 69 59.4
COL.COLO4_21325 Corchorus olitorius HOM05D007826 ORTHO05D009921 1.7e-08 63.5 43 65.1
CiPaw.14G010600 Carya illinoinensis HOM05D007826 ORTHO05D009921 1.4e-07 60.5 42 66.7


User provided reference genes

Program Settings