Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 1.7e-251 872.1 406 100.0
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 3.3e-146 522.3 319 71.8
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 4.3e-146 521.9 319 73.0
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 1.2e-145 520.4 319 73.0
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 2.1e-145 519.6 321 71.3
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 2.8e-145 519.2 319 72.4
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 6.2e-145 518.1 319 72.1
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 1.8e-144 516.5 319 71.5
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.8e-144 516.5 319 71.5
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 9.0e-144 514.2 319 71.5
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 9.0e-144 514.2 319 71.5
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 2.0e-143 513.1 318 71.1
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 2.0e-143 513.1 319 70.8
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 2.0e-143 513.1 319 72.1
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 2.6e-143 512.7 319 71.2
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 5.8e-143 511.5 319 70.5
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 9.9e-143 510.8 319 70.5
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 9.9e-143 510.8 322 69.9
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 1.7e-142 510.0 318 70.8
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 4.9e-142 508.4 314 72.3
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 4.9e-142 508.4 319 70.5
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 6.4e-142 508.1 304 74.0
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 8.4e-142 507.7 307 73.0
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 1.1e-141 507.3 316 70.9
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 1.4e-141 506.9 313 70.3
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 1.4e-141 506.9 323 69.7
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.4e-141 506.9 314 72.0
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 1.4e-141 506.9 318 71.4
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 1.9e-141 506.5 320 68.8
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 2.4e-141 506.1 307 72.6
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 2.4e-141 506.1 319 69.9
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 5.4e-141 505.0 306 73.9
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 5.4e-141 505.0 318 69.2
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 9.3e-141 504.2 318 69.8
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 1.2e-140 503.8 320 70.0
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.6e-140 503.4 318 70.8
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 3.5e-140 502.3 314 71.0
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 4.6e-140 501.9 323 69.3
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 7.8e-140 501.1 319 70.2
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 1.0e-139 500.7 319 69.3
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 1.3e-139 500.4 313 70.3
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 1.3e-139 500.4 319 68.3
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 1.3e-139 500.4 314 71.3
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 3.0e-139 499.2 315 68.9
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 3.0e-139 499.2 324 67.0
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 3.9e-139 498.8 320 70.3
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 8.7e-139 497.7 313 69.0
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 8.7e-139 497.7 319 71.5
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 1.1e-138 497.3 308 72.4
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 1.1e-138 497.3 314 71.0
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 1.5e-138 496.9 320 69.4
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 1.5e-138 496.9 308 71.4
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 1.9e-138 496.5 306 71.2
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.9e-138 496.5 318 69.5
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 3.3e-138 495.7 320 69.1
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 3.3e-138 495.7 319 69.9
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 3.3e-138 495.7 314 71.0
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 4.3e-138 495.4 320 70.9
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 4.3e-138 495.4 314 71.0
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 5.6e-138 495.0 305 70.8
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 7.3e-138 494.6 319 69.0
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 9.6e-138 494.2 318 69.2
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.6e-137 493.4 313 68.7
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 1.6e-137 493.4 306 71.6
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 2.1e-137 493.0 319 69.0
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 3.6e-137 492.3 320 69.4
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 3.6e-137 492.3 308 70.8
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 4.8e-137 491.9 309 71.5
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 4.8e-137 491.9 321 71.0
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 8.1e-137 491.1 311 69.1
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 8.1e-137 491.1 319 67.1
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 1.1e-136 490.7 307 71.0
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.4e-136 490.3 320 69.1
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 1.8e-136 490.0 319 67.7
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 3.1e-136 489.2 330 68.5
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 5.3e-136 488.4 320 67.8
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 6.9e-136 488.0 318 69.2
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 9.0e-136 487.6 313 68.4
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 9.0e-136 487.6 319 67.4
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.0e-135 486.5 306 69.9
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 2.6e-135 486.1 318 67.0
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 3.4e-135 485.7 319 66.5
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 5.8e-135 485.0 307 68.4
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 7.6e-135 484.6 319 69.3
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 2.2e-134 483.0 307 68.1
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 2.2e-134 483.0 312 69.2
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 2.9e-134 482.6 314 66.2
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 3.8e-134 482.3 310 68.1
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 4.9e-134 481.9 334 65.6
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 4.9e-134 481.9 308 70.5
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 4.9e-134 481.9 315 67.9
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 1.4e-133 480.3 319 66.5
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 1.4e-133 480.3 305 68.5
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 1.4e-133 480.3 304 68.8
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 1.9e-133 479.9 319 66.1
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 2.7e-132 476.1 303 69.3
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 3.5e-132 475.7 303 69.0
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 3.5e-132 475.7 303 69.6
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 4.6e-132 475.3 303 68.6
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 7.9e-132 474.6 314 66.9
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.0e-131 474.2 308 68.2
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 1.3e-131 473.8 303 69.0
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 1.8e-131 473.4 303 68.0
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 3.0e-131 472.6 306 68.3
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 5.1e-131 471.9 314 65.6
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 1.9e-130 469.9 319 65.8
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 3.3e-130 469.2 306 68.6
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 5.6e-130 468.4 306 68.0
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 5.6e-130 468.4 320 65.6
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 5.6e-130 468.4 306 66.7
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 9.6e-130 467.6 305 67.5
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 9.6e-130 467.6 307 67.8
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.8e-129 466.1 322 65.8
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 3.7e-129 465.7 303 68.0
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 1.8e-128 463.4 306 67.3
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 3.1e-128 462.6 316 68.4
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 1.5e-127 460.3 306 67.3
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 2.6e-127 459.5 302 67.2
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 1.4e-125 453.8 323 62.8
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 7.1e-125 451.4 295 66.1
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 3.5e-124 449.1 318 64.8
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 1.3e-123 447.2 293 68.3
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.8e-123 446.8 342 59.9
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 5.1e-123 445.3 307 63.5
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 6.7e-123 444.9 316 62.7
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.5e-122 443.7 288 69.4
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 1.6e-121 440.3 316 64.2
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 1.8e-120 436.8 289 66.4
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 3.1e-120 436.0 306 65.0
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 1.2e-119 434.1 320 59.7
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 2.9e-118 429.5 273 68.9
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 9.7e-114 414.5 319 59.6
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.8e-112 410.2 281 64.4
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 7.7e-111 404.8 306 60.5
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 8.5e-110 401.4 305 59.0
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.8e-102 375.9 320 57.5
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 3.8e-102 375.9 320 57.5
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 6.7e-99 365.2 296 58.8
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 2.0e-95 353.6 225 68.9
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 3.2e-93 346.3 217 68.2
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 5.5e-93 345.5 307 53.1
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 1.2e-92 344.4 310 51.6
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 9.1e-80 301.6 272 55.1
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.7e-71 273.5 333 43.8
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 1.0e-70 271.6 181 68.0
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.3e-61 239.6 259 47.9
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 3.2e-48 196.8 126 68.3
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 3.5e-47 193.4 122 70.5
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 9.5e-45 185.3 323 34.4
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.2e-40 170.2 115 67.0
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 7.8e-39 165.6 332 31.0
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 8.4e-33 145.6 245 35.9
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 1.2e-31 141.7 342 29.8
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 3.0e-30 137.1 96 63.5
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 1.3e-17 95.1 61 72.1
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 4.2e-08 63.5 74 43.2


User provided reference genes

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