Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02613 Sequoiadendron giganteum HOM05D005382 ORTHO05D006795 8.3e-88 327.0 166 100.0
Lj5A81T85 Lonicera japonica HOM05D005382 ORTHO05D006795 6.2e-35 151.4 113 67.3
COL.COLO4_26772 Corchorus olitorius HOM05D005382 ORTHO05D006795 1.1e-34 150.6 131 62.6
CiPaw.01G256500 Carya illinoinensis HOM05D005382 ORTHO05D006795 1.8e-34 149.8 113 67.3
MSTRG.9395 Avicennia marina HOM05D005382 ORTHO05D006795 3.1e-34 149.1 118 65.3
BraA07t31983Z Brassica rapa HOM05D005382 ORTHO05D006795 3.1e-34 149.1 126 61.1
DCAR_021374 Daucus carota HOM05D005382 ORTHO05D006795 4.0e-34 148.7 141 56.0
Lsat_1_v5_gn_4_85061 Lactuca sativa HOM05D005382 ORTHO05D006795 4.0e-34 148.7 119 64.7
SGA_v2.0_scaffold515G52664 Striga asiatica HOM05D003096 ORTHO05D003521 4.0e-34 148.7 121 60.3
Thecc.06G046600 Theobroma cacao HOM05D005382 ORTHO05D006795 4.0e-34 148.7 120 64.2
A07p44750 Brassica napus HOM05D005382 ORTHO05D006795 5.3e-34 148.3 126 61.1
THA.LOC104808172 Tarenaya hassleriana HOM05D005382 ORTHO05D006795 5.3e-34 148.3 107 69.2
Cc04_g05300 Coffea canephora HOM05D005382 ORTHO05D006795 6.9e-34 147.9 125 60.8
RcHm_v2.0_Chr2g0132311 Rosa chinensis HOM05D005382 ORTHO05D006795 6.9e-34 147.9 125 60.0
TWI12G1456 Tripterygium wilfordii HOM05D005382 ORTHO05D006795 6.9e-34 147.9 118 65.3
MSTRG.22842 Avicennia marina HOM05D005382 ORTHO05D006795 9.0e-34 147.5 118 64.4
C06p53570 Brassica napus HOM05D005382 ORTHO05D006795 9.0e-34 147.5 122 62.3
HanXRQChr09g0274181 Helianthus annuus HOM05D005382 ORTHO05D006795 9.0e-34 147.5 122 62.3
QL05p036845 Quercus lobata HOM05D005382 ORTHO05D006795 9.0e-34 147.5 118 63.6
Sabra03G0135500 Salix brachista HOM05D005382 ORTHO05D006795 9.0e-34 147.5 120 64.2
SGA_v2.0_scaffold74G24593 Striga asiatica HOM05D005382 ORTHO05D006795 9.0e-34 147.5 113 65.5
CiPaw.02G163400 Carya illinoinensis HOM05D005382 ORTHO05D006795 1.2e-33 147.1 117 65.0
MD09G1227600 Malus domestica HOM05D005382 ORTHO05D006795 1.2e-33 147.1 113 62.8
Nn8g40079 Nelumbo nucifera HOM05D005382 ORTHO05D006795 1.2e-33 147.1 117 65.0
BcaB02g08711 Brassica carinata HOM05D005382 ORTHO05D006795 1.5e-33 146.7 126 61.1
Lalb_Chr25g0278731 Lupinus albus HOM05D005382 ORTHO05D006795 1.5e-33 146.7 122 61.5
Manes.11G069200 Manihot esculenta HOM05D005382 ORTHO05D006795 1.5e-33 146.7 145 53.1
Prupe.3G103600 Prunus persica HOM05D005382 ORTHO05D006795 1.5e-33 146.7 114 65.8
Migut.I00626 Erythranthe guttata HOM05D005382 ORTHO05D006795 2.0e-33 146.4 118 62.7
SalBow1G1272 Salvia bowleyana HOM05D005382 ORTHO05D006795 2.0e-33 146.4 118 64.4
BcaC08g47533 Brassica carinata HOM05D005382 ORTHO05D006795 2.6e-33 146.0 126 60.3
BolC6t40373H Brassica oleracea HOM05D005382 ORTHO05D006795 2.6e-33 146.0 126 60.3
Gorai.007G085500 Gossypium raimondii HOM05D005382 ORTHO05D006795 2.6e-33 146.0 107 68.2
Lj3g0027435 Lotus japonicus HOM05D005382 ORTHO05D006795 2.6e-33 146.0 121 62.8
Phvul.008G253200 Phaseolus vulgaris HOM05D005382 ORTHO05D006795 2.6e-33 146.0 110 68.2
VMungo0647G2390 Vigna mungo HOM05D005382 ORTHO05D006795 2.6e-33 146.0 118 64.4
Gohir.A11G075200 Gossypium hirsutum HOM05D005382 ORTHO05D006795 3.4e-33 145.6 107 68.2
MD17G1226400 Malus domestica HOM05D005382 ORTHO05D006795 4.5e-33 145.2 112 64.3
Potri.003G184925 Populus trichocarpa HOM05D005382 ORTHO05D006795 4.5e-33 145.2 120 63.3
MELO3C023486.2 Cucumis melo HOM05D005382 ORTHO05D006795 5.8e-33 144.8 105 66.7
FAN02G4537 Fragaria x ananassa HOM05D005382 ORTHO05D006795 5.8e-33 144.8 120 62.5
FAN05G5289 Fragaria x ananassa HOM05D005382 ORTHO05D006795 5.8e-33 144.8 120 62.5
Oeu003125.1 Olea europaea HOM05D005382 ORTHO05D006795 5.8e-33 144.8 120 61.7
Potri.001G041900 Populus trichocarpa HOM05D005382 ORTHO05D006795 5.8e-33 144.8 114 64.0
Sed0008280 Sechium edule HOM05D005382 ORTHO05D006795 5.8e-33 144.8 112 63.4
Duzib235G0288 Durio zibethinus HOM05D005382 ORTHO05D006795 7.6e-33 144.4 107 67.3
FvH4_6g28270 Fragaria vesca HOM05D005382 ORTHO05D006795 7.6e-33 144.4 120 62.5
MBI15_g08404_MAGBIO Magnolia biondii HOM05D005382 ORTHO05D006795 7.6e-33 144.4 130 58.5
Os02g0793900 Oryza sativa ssp. japonica HOM05D005382 ORTHO05D006795 7.6e-33 144.4 120 63.3
Pp3c25_9780 Physcomitrium patens HOM05D005382 ORTHO05D006795 7.6e-33 144.4 110 66.4
TWI75G0559 Tripterygium wilfordii HOM05D005382 ORTHO05D006795 7.6e-33 144.4 118 63.6
Actinidia08935 Actinidia chinensis HOM05D005382 ORTHO05D006795 1.0e-32 144.1 118 63.6
CSS0039254 Camellia sinensis var. sinensis HOM05D005382 ORTHO05D006795 1.0e-32 144.1 113 64.6
Ciclev10026461m.g Citrus clementina HOM05D005382 ORTHO05D006795 1.0e-32 144.1 118 61.9
Haze_16689 Corylus avellana HOM05D005382 ORTHO05D006795 1.0e-32 144.1 117 63.2
HanXRQChr04g0100021 Helianthus annuus HOM05D005382 ORTHO05D006795 1.0e-32 144.1 117 63.2
Manes.04G100900 Manihot esculenta HOM05D005382 ORTHO05D006795 1.0e-32 144.1 110 64.5
Zm00001eb257680 Zea mays HOM05D005382 ORTHO05D006795 1.0e-32 144.1 120 63.3
Cfa001857 Carpinus fangiana HOM05D005382 ORTHO05D006795 1.3e-32 143.7 118 62.7
ClCG09G003490 Citrullus lanatus HOM05D005382 ORTHO05D006795 1.3e-32 143.7 105 66.7
Glyma.08G220400 Glycine max HOM05D005382 ORTHO05D006795 1.3e-32 143.7 110 66.4
PGR102G0492 Punica granatum HOM05D005382 ORTHO05D006795 1.3e-32 143.7 121 59.5
Rhsim08G0203100 Rhododendron simsii HOM05D005382 ORTHO05D006795 1.3e-32 143.7 118 61.9
AT1G80940 Arabidopsis thaliana HOM05D005382 ORTHO05D006795 1.7e-32 143.3 121 62.8
MSTRG.11221 Avicennia marina HOM05D005382 ORTHO05D006795 1.7e-32 143.3 115 65.2
CsaV3_7G031710 Cucumis sativus L. HOM05D005382 ORTHO05D006795 1.7e-32 143.3 116 61.2
Nn8g40087 Nelumbo nucifera HOM05D005382 ORTHO05D006795 1.7e-32 143.3 117 62.4
Rhsim12G0185400 Rhododendron simsii HOM05D005382 ORTHO05D006795 1.7e-32 143.3 113 62.8
Duzib192G0805 Durio zibethinus HOM05D005382 ORTHO05D006795 2.2e-32 142.9 107 65.4
Thhalv10019121m.g Eutrema salsugineum HOM05D005382 ORTHO05D006795 2.2e-32 142.9 121 62.8
Glyma.07G021400 Glycine max HOM05D005382 ORTHO05D006795 2.2e-32 142.9 110 66.4
AL2G40440 Arabidopsis lyrata HOM05D005382 ORTHO05D006795 2.9e-32 142.5 130 61.5
FAN09G0036 Fragaria x ananassa HOM05D005382 ORTHO05D006795 2.9e-32 142.5 120 64.2
Pp3c16_25700 Physcomitrium patens HOM05D005382 ORTHO05D006795 2.9e-32 142.5 110 64.5
TAR625G1145 Trochodendron aralioides HOM05D005382 ORTHO05D006795 2.9e-32 142.5 118 62.7
Aa31LG4G1250 Aethionema arabicum HOM05D005382 ORTHO05D006795 3.8e-32 142.1 109 68.8
Eucgr.J03130 Eucalyptus grandis HOM05D005382 ORTHO05D006795 3.8e-32 142.1 109 67.9
SMO145G0139 Selaginella moellendorffii HOM05D005382 ORTHO05D006795 3.8e-32 142.1 116 64.7
C06p29630 Brassica napus HOM05D005382 ORTHO05D006795 4.9e-32 141.7 127 61.4
BolC6t38128H Brassica oleracea HOM05D005382 ORTHO05D006795 4.9e-32 141.7 127 61.4
Lalb_Chr01g0011991 Lupinus albus HOM05D005382 ORTHO05D006795 4.9e-32 141.7 115 60.9
Sp5g34800 Schrenkiella parvula HOM05D005382 ORTHO05D006795 4.9e-32 141.7 123 61.8
Carub.0002s2660 Capsella rubella HOM05D005382 ORTHO05D006795 6.5e-32 141.4 123 63.4
Oeu051555.1 Olea europaea HOM05D005382 ORTHO05D006795 6.5e-32 141.4 120 60.8
BcaNung04166 Brassica carinata HOM05D005382 ORTHO05D006795 8.4e-32 141.0 127 61.4
A07p26960 Brassica napus HOM05D005382 ORTHO05D006795 8.4e-32 141.0 127 61.4
BraA07t30340Z Brassica rapa HOM05D005382 ORTHO05D006795 8.4e-32 141.0 127 61.4
Hma1.2p1_0329F.1_g127290 Hydrangea macrophylla HOM05D005382 ORTHO05D006795 8.4e-32 141.0 118 62.7
Medtr4g007700 Medicago truncatula HOM05D005382 ORTHO05D006795 8.4e-32 141.0 108 64.8
Sabra01G0028700 Salix brachista HOM05D005382 ORTHO05D006795 8.4e-32 141.0 114 62.3
HPP92_010348 Vanilla planifolia HOM05D005382 ORTHO05D006795 8.4e-32 141.0 111 64.9
BcaB02g07237 Brassica carinata HOM05D005382 ORTHO05D006795 1.1e-31 140.6 126 61.1
CDE07G1687 Ceratophyllum demersum HOM05D005382 ORTHO05D006795 1.4e-31 140.2 117 65.0
ECA247G2189 Erigeron canadensis HOM05D005382 ORTHO05D006795 1.4e-31 140.2 120 60.0
Lsat_1_v5_gn_1_30801 Lactuca sativa HOM05D005382 ORTHO05D006795 1.4e-31 140.2 120 60.0
Mapoly0128s0009 Marchantia polymorpha HOM05D005382 ORTHO05D006795 1.4e-31 140.2 108 65.7
PGSC0003DMG400014155 Solanum tuberosum HOM05D005382 ORTHO05D006795 1.4e-31 140.2 122 59.0
vmacro16842 Vaccinium macrocarpon HOM05D005382 ORTHO05D006795 1.9e-31 139.8 113 61.1
ATR0580G392 Amborella trichopoda HOM05D005382 ORTHO05D006795 2.5e-31 139.4 111 64.0
ECA232G4196 Erigeron canadensis HOM05D005382 ORTHO05D006795 2.5e-31 139.4 120 60.0
Peaxi162Scf00314g01032 Petunia axillaris HOM05D005382 ORTHO05D006795 2.5e-31 139.4 113 61.9
CAN.G1008.7 Capsicum annuum HOM05D005382 ORTHO05D006795 3.2e-31 139.0 122 58.2
Cpa.g.c28380.1 Carica papaya HOM05D005382 ORTHO05D006795 3.2e-31 139.0 110 68.2
Sopen03g036580 Solanum pennellii HOM05D005382 ORTHO05D006795 3.2e-31 139.0 122 58.2
Eucgr.F03985 Eucalyptus grandis HOM05D005382 ORTHO05D006795 4.2e-31 138.7 113 59.3
Nitab4.5_0002700g0060 Nicotiana tabacum HOM05D005382 ORTHO05D006795 4.2e-31 138.7 124 58.9
CDE04G1090 Ceratophyllum demersum HOM05D005382 ORTHO05D006795 5.5e-31 138.3 107 64.5
PSO782G0145 Papaver somniferum HOM05D005382 ORTHO05D006795 5.5e-31 138.3 118 57.6
Solyc03g117670.4 Solanum lycopersicum HOM05D005382 ORTHO05D006795 5.5e-31 138.3 122 58.2
Dinv21426 Davidia involucrata HOM05D005382 ORTHO05D006795 7.1e-31 137.9 117 62.4
Sc12g0008250 Simmondsia chinensis HOM05D005382 ORTHO05D006795 7.1e-31 137.9 123 59.3
CARHR073510 Cardamine hirsuta HOM05D005382 ORTHO05D006795 1.2e-30 137.1 123 60.2
Nitab4.5_0004738g0090 Nicotiana tabacum HOM05D005382 ORTHO05D006795 1.2e-30 137.1 124 58.1
SEGI_41275 Sequoiadendron giganteum HOM05D005382 ORTHO05D006795 1.2e-30 137.1 108 64.8
GSVIVG01016103001 Vitis vinifera HOM05D005382 ORTHO05D006795 1.2e-30 137.1 118 61.0
PSO063G0682 Papaver somniferum HOM05D005382 ORTHO05D006795 2.7e-30 136.0 118 56.8
EL10Ac8g19398 Beta vulgaris HOM05D005382 ORTHO05D006795 3.5e-30 135.6 117 57.3
Gohir.D11G079900 Gossypium hirsutum HOM05D005382 ORTHO05D006795 3.5e-30 135.6 97 70.1
FAN14G0578 Fragaria x ananassa HOM05D005382 ORTHO05D006795 7.9e-30 134.4 97 70.1
AUR62032996 Chenopodium quinoa HOM05D005382 ORTHO05D006795 1.0e-29 134.0 117 58.1
AUR62034069 Chenopodium quinoa HOM05D007611 ORTHO05D006795 1.0e-29 134.0 114 59.6
CANSAT56G2690 Cannabis sativa HOM05D005382 ORTHO05D006795 5.1e-29 131.7 121 57.0
TPR.G3367 Trifolium pratense HOM05D005382 ORTHO05D006795 7.4e-28 127.9 96 66.7
Psat7g262200 Pisum sativum HOM05D005382 ORTHO05D006795 6.2e-27 124.8 94 66.0
arahy.Tifrunner.gnm1.ann1.7IZ6IW Arachis hypogaea HOM05D005382 ORTHO05D006795 1.0e-21 107.5 164 42.1
arahy.Tifrunner.gnm1.ann1.HUQR60 Arachis hypogaea HOM05D005382 ORTHO05D006795 1.0e-21 107.5 164 42.1
AagrBONN_evm.TU.Sc2ySwM_117.2014 Anthoceros agrestis HOM05D005382 ORTHO05D006795 1.5e-17 93.6 77 64.9
unitig_22.g6275 Utricularia gibba HOM05D005382 ORTHO05D006795 2.0e-17 93.2 78 67.9
Ah.14g085670 Amaranthus hybridus HOM05D005382 ORTHO05D006795 1.3e-16 90.5 117 41.0
SEGI_29844 Sequoiadendron giganteum HOM05D005382 ORTHO05D386190 4.2e-15 85.5 56 69.6
CSS0015514 Camellia sinensis var. sinensis HOM05D005382 ORTHO05D006795 6.1e-14 81.6 52 71.2
Hund12559 Selenicereus undatus HOM05D005382 ORTHO05D006795 1.5e-12 77.0 51 66.7
BcaB07g33703 Brassica carinata HOM05D005382 ORTHO05D006795 3.1e-10 69.3 62 56.5
Actinidia36864 Actinidia chinensis HOM05D005382 ORTHO05D006795 6.9e-10 68.2 93 48.4
Atru.chr1.2804_Atru.chr1.2805 Acer truncatum HOM05D005382 ORTHO05D006795 2.6e-09 66.2 96 44.8
Actinidia26580 Actinidia chinensis HOM05D005382 ORTHO05D006795 3.8e-08 62.4 66 56.1
BcaB07g33704 Brassica carinata HOM05D005382 ORTHO05D006795 1.6e-06 57.0 52 55.8
BcaB07g33705 Brassica carinata HOM05D005382 ORTHO05D006795 1.6e-06 57.0 52 55.8


User provided reference genes

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