Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02537 Sequoiadendron giganteum HOM05D001348 ORTHO05D385581 5.9e-36 153.7 78 100.0
HPP92_025429 Vanilla planifolia HOM05D001348 ORTHO05D008393 1.1e-10 69.7 59 59.3
Nn1g07231 Nelumbo nucifera HOM05D001348 ORTHO05D008393 3.3e-10 68.2 59 57.6
CDE04G2814 Ceratophyllum demersum HOM05D001348 ORTHO05D008393 5.6e-10 67.4 59 55.9
Manes.03G133300 Manihot esculenta HOM05D001348 ORTHO05D008393 9.5e-10 66.6 59 57.6
PSO478G3826 Papaver somniferum HOM05D001348 ORTHO05D008393 1.6e-09 65.9 59 54.2
Aqoxy1G03056 Aquilegia oxysepala HOM05D001348 ORTHO05D008393 2.1e-09 65.5 59 55.9
THA.LOC104817860 Tarenaya hassleriana HOM05D001348 ORTHO05D008393 2.8e-09 65.1 58 55.2
CsaV3_7G021990 Cucumis sativus L. HOM05D001348 ORTHO05D008393 3.6e-09 64.7 59 54.2
arahy.Tifrunner.gnm1.ann1.C5QWNT Arachis hypogaea HOM05D001348 ORTHO05D008393 4.7e-09 64.3 59 54.2
CiPaw.11G192600 Carya illinoinensis HOM05D001348 ORTHO05D008393 4.7e-09 64.3 59 52.5
Dinv40782 Davidia involucrata HOM05D001348 ORTHO05D008393 8.0e-09 63.5 59 52.5
TAR624G0107 Trochodendron aralioides HOM05D001348 ORTHO05D008393 1.0e-08 63.2 59 50.8
Zm00001eb357830 Zea mays HOM05D001348 ORTHO05D008393 1.0e-08 63.2 59 54.2
Gohir.A04G012800 Gossypium hirsutum HOM05D001348 ORTHO05D008393 1.4e-08 62.8 59 50.8
Gohir.D05G373100 Gossypium hirsutum HOM05D001348 ORTHO05D008393 1.8e-08 62.4 59 50.8
Gorai.009G441800 Gossypium raimondii HOM05D001348 ORTHO05D008393 1.8e-08 62.4 59 50.8
BcaC05g28331 Brassica carinata HOM05D001348 ORTHO05D008393 2.3e-08 62.0 58 53.4
A05p28460 Brassica napus HOM05D001348 ORTHO05D008393 2.3e-08 62.0 58 53.4
C05p43900 Brassica napus HOM05D001348 ORTHO05D008393 2.3e-08 62.0 58 53.4
BolC5t33106H Brassica oleracea HOM05D001348 ORTHO05D008393 2.3e-08 62.0 58 53.4
BraA05t21725Z Brassica rapa HOM05D001348 ORTHO05D008393 2.3e-08 62.0 58 53.4
Lj6g0019683 Lotus japonicus HOM05D001348 ORTHO05D008393 3.1e-08 61.6 59 50.8
QL08p008747 Quercus lobata HOM05D001348 ORTHO05D008393 3.1e-08 61.6 58 50.0
QL09p024307 Quercus lobata HOM05D001348 ORTHO05D008393 3.1e-08 61.6 58 50.0
GSVIVG01037695001 Vitis vinifera HOM05D001348 ORTHO05D008393 3.1e-08 61.6 59 50.8
FvH4_3g23220 Fragaria vesca HOM05D001348 ORTHO05D008393 4.0e-08 61.2 59 52.5
FAN11G3727 Fragaria x ananassa HOM05D001348 ORTHO05D008393 4.0e-08 61.2 59 52.5
MD11G1212700 Malus domestica HOM05D001348 ORTHO05D008393 4.0e-08 61.2 59 50.8
TWI38G1719 Tripterygium wilfordii HOM05D001348 ORTHO05D008393 4.0e-08 61.2 59 50.8
Ciclev10007401m.g Citrus clementina HOM05D001348 ORTHO05D008393 5.2e-08 60.8 59 50.8
FAN16G1777 Fragaria x ananassa HOM05D001348 ORTHO05D008393 5.2e-08 60.8 59 52.5
FAN21G3120 Fragaria x ananassa HOM05D001348 ORTHO05D008393 5.2e-08 60.8 59 52.5
CSS0015657 Camellia sinensis var. sinensis HOM05D001348 ORTHO05D008393 6.8e-08 60.5 59 52.5
CSS0031743 Camellia sinensis var. sinensis HOM05D001348 ORTHO05D008393 6.8e-08 60.5 59 52.5
Carub.0003s2038 Capsella rubella HOM05D001348 ORTHO05D008393 6.8e-08 60.5 58 53.4
FAN25G0105 Fragaria x ananassa HOM05D001348 ORTHO05D008393 6.8e-08 60.5 59 52.5
FAN25G0826 Fragaria x ananassa HOM05D001348 ORTHO05D008393 6.8e-08 60.5 59 52.5
Lj1A878T41 Lonicera japonica HOM05D001348 ORTHO05D008393 6.8e-08 60.5 59 50.8
Prupe.4G219000 Prunus persica HOM05D001348 ORTHO05D008393 6.8e-08 60.5 59 50.8
Lalb_Chr15g0081511 Lupinus albus HOM05D001348 ORTHO05D008393 8.9e-08 60.1 59 50.8
Phvul.006G047000 Phaseolus vulgaris HOM05D001348 ORTHO05D008393 8.9e-08 60.1 59 50.8
Cc05_g14070 Coffea canephora HOM05D001348 ORTHO05D008393 1.2e-07 59.7 58 48.3
Thecc.07G031600 Theobroma cacao HOM05D001348 ORTHO05D008393 1.2e-07 59.7 59 47.5
TPR.G14440 Trifolium pratense HOM05D001348 ORTHO05D008393 1.2e-07 59.7 59 50.8
Os06g0367100 Oryza sativa ssp. japonica HOM05D001348 ORTHO05D008393 1.5e-07 59.3 59 52.5
Sed0016477 Sechium edule HOM05D001348 ORTHO05D008393 1.5e-07 59.3 59 50.8
Actinidia10744 Actinidia chinensis HOM05D001348 ORTHO05D008393 2.0e-07 58.9 59 49.2
Ah.04g166040 Amaranthus hybridus HOM05D001348 ORTHO05D008393 2.0e-07 58.9 59 49.2
EL10Ac4g07758 Beta vulgaris HOM05D001348 ORTHO05D008393 2.0e-07 58.9 59 47.5
Migut.H01807 Erythranthe guttata HOM05D001348 ORTHO05D008393 2.0e-07 58.9 57 50.9
RcHm_v2.0_Chr5g0040911 Rosa chinensis HOM05D001348 ORTHO05D008393 2.0e-07 58.9 59 50.8
SGA_v2.0_scaffold363G49944 Striga asiatica HOM05D001348 ORTHO05D008393 2.0e-07 58.9 59 50.8
AL3G34160 Arabidopsis lyrata HOM05D001348 ORTHO05D008393 2.6e-07 58.5 58 50.0
MSTRG.14452 Avicennia marina HOM05D001348 ORTHO05D008393 3.4e-07 58.2 59 50.8
Potri.001G359200 Populus trichocarpa HOM05D001348 ORTHO05D008393 3.4e-07 58.2 59 50.8
AT3G20440 Arabidopsis thaliana HOM05D001348 ORTHO05D008393 4.4e-07 57.8 58 50.0
BcaB06g26109 Brassica carinata HOM05D001348 ORTHO05D008393 4.4e-07 57.8 58 50.0
CARHR096150 Cardamine hirsuta HOM05D001348 ORTHO05D008393 4.4e-07 57.8 58 50.0
Glyma.18G092600 Glycine max HOM05D001348 ORTHO05D008393 4.4e-07 57.8 59 49.2
PGR031G0282 Punica granatum HOM05D001348 ORTHO05D008393 4.4e-07 57.8 59 50.8
Sp3g18450 Schrenkiella parvula HOM05D001348 ORTHO05D008393 5.8e-07 57.4 58 50.0
Sabra16G0236900 Salix brachista HOM05D001348 ORTHO05D008393 7.5e-07 57.0 59 49.2
Thhalv10020019m.g Eutrema salsugineum HOM05D001348 ORTHO05D008393 9.8e-07 56.6 58 48.3
Eucgr.F03487 Eucalyptus grandis HOM05D001348 ORTHO05D008393 1.7e-06 55.8 59 47.5
CANSAT78G2496 Cannabis sativa HOM05D001348 ORTHO05D008393 2.2e-06 55.5 59 47.5
Pp3c1_1810 Physcomitrium patens HOM05D001348 ORTHO05D008393 2.2e-06 55.5 55 47.3
Psat5g173680 Pisum sativum HOM05D001348 ORTHO05D008393 2.2e-06 55.5 59 47.5
HanXRQChr03g0076721 Helianthus annuus HOM05D001348 ORTHO05D008393 2.9e-06 55.1 59 42.4
PGSC0003DMG400022307 Solanum tuberosum HOM05D001348 ORTHO05D008393 2.9e-06 55.1 57 50.9
Sopen07g033020 Solanum pennellii HOM05D001348 ORTHO05D008393 3.7e-06 54.7 57 50.9
Lsat_1_v5_gn_9_92360 Lactuca sativa HOM05D001348 ORTHO05D008393 4.9e-06 54.3 58 43.1
AUR62020390 Chenopodium quinoa HOM05D001348 ORTHO05D008393 6.4e-06 53.9 56 48.2


User provided reference genes

Program Settings