Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 7.5e-189 663.7 333 100.0
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 1.0e-108 397.5 221 84.6
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 2.5e-107 392.9 223 83.9
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 3.2e-107 392.5 221 85.1
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.6e-106 390.2 223 83.9
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 2.1e-106 389.8 225 82.2
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 4.7e-106 388.7 223 83.4
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 7.9e-106 387.9 223 82.1
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 1.0e-105 387.5 223 81.6
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 1.4e-105 387.1 225 81.8
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 5.1e-105 385.2 221 81.9
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 5.1e-105 385.2 223 82.1
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 1.1e-104 384.0 221 81.9
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 2.0e-104 383.3 227 80.2
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 2.0e-104 383.3 227 80.6
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 4.4e-104 382.1 223 80.3
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 4.4e-104 382.1 222 81.1
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 7.4e-104 381.3 223 80.7
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 7.4e-104 381.3 223 81.6
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 1.3e-103 380.6 223 80.7
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 1.3e-103 380.6 223 79.4
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 1.7e-103 380.2 221 79.6
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 1.7e-103 380.2 222 80.6
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 2.2e-103 379.8 223 79.8
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 3.7e-103 379.0 223 80.7
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 3.7e-103 379.0 221 80.1
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 4.8e-103 378.6 218 81.2
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 4.8e-103 378.6 218 81.2
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 4.8e-103 378.6 223 80.7
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 6.3e-103 378.3 223 81.6
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 6.3e-103 378.3 223 81.2
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 6.3e-103 378.3 223 81.2
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 8.2e-103 377.9 223 79.8
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 8.2e-103 377.9 223 79.8
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 1.1e-102 377.5 221 78.7
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 1.1e-102 377.5 221 79.6
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 1.4e-102 377.1 221 80.1
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 1.8e-102 376.7 220 80.0
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 1.8e-102 376.7 223 80.3
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 1.8e-102 376.7 223 78.5
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 1.8e-102 376.7 221 81.0
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 2.4e-102 376.3 225 79.6
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 3.1e-102 375.9 223 80.7
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 3.1e-102 375.9 221 80.1
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 3.1e-102 375.9 223 80.7
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 4.1e-102 375.6 223 79.8
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 4.1e-102 375.6 223 79.4
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 5.3e-102 375.2 223 79.4
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 5.3e-102 375.2 223 79.4
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 5.3e-102 375.2 221 78.3
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 5.3e-102 375.2 223 79.4
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 7.0e-102 374.8 223 80.3
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 7.0e-102 374.8 218 79.4
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 9.1e-102 374.4 223 79.4
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 9.1e-102 374.4 221 79.2
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 1.2e-101 374.0 223 78.9
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.2e-101 374.0 223 78.9
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 1.2e-101 374.0 221 80.1
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 1.2e-101 374.0 220 78.6
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.2e-101 374.0 223 79.8
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 1.5e-101 373.6 221 80.1
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.0e-101 373.2 223 78.9
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 2.6e-101 372.9 223 78.5
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 2.6e-101 372.9 223 78.5
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 2.6e-101 372.9 221 78.7
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 2.6e-101 372.9 221 80.5
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 3.5e-101 372.5 213 80.3
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 4.5e-101 372.1 223 78.0
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 4.5e-101 372.1 223 79.8
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 5.9e-101 371.7 223 78.5
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 5.9e-101 371.7 223 78.5
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 5.9e-101 371.7 223 78.9
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 7.7e-101 371.3 222 78.4
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 7.7e-101 371.3 223 78.9
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 1.7e-100 370.2 219 79.9
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 2.2e-100 369.8 226 78.3
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 2.9e-100 369.4 223 78.9
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 2.9e-100 369.4 221 78.3
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 3.8e-100 369.0 223 77.6
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 3.8e-100 369.0 223 77.6
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 5.0e-100 368.6 221 77.4
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 5.0e-100 368.6 223 78.0
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 5.0e-100 368.6 223 77.1
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 6.5e-100 368.2 223 77.6
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 6.5e-100 368.2 222 78.8
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 8.5e-100 367.9 221 76.5
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.1e-99 367.5 217 79.7
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 1.4e-99 367.1 218 80.3
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 1.4e-99 367.1 225 79.1
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 1.9e-99 366.7 221 77.4
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 3.2e-99 365.9 223 76.7
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 3.2e-99 365.9 223 76.7
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 5.5e-99 365.2 223 76.7
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 9.4e-99 364.4 223 76.2
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 9.4e-99 364.4 219 78.1
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 1.6e-98 363.6 223 78.0
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 6.1e-98 361.7 223 76.2
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 6.1e-98 361.7 221 77.4
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 8.0e-98 361.3 223 77.6
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 1.0e-97 360.9 221 75.6
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 1.8e-97 360.1 223 76.2
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 1.3e-95 354.0 223 73.1
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 1.3e-95 354.0 223 73.1
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 2.2e-95 353.2 223 73.1
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 2.2e-95 353.2 223 73.1
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 8.2e-95 351.3 222 72.5
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 3.1e-94 349.4 219 74.0
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 3.1e-94 349.4 259 65.3
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 4.1e-94 349.0 222 73.4
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 7.0e-94 348.2 223 74.4
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 5.9e-93 345.1 219 74.0
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 2.9e-92 342.8 219 73.1
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 6.5e-92 341.7 221 75.1
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 4.2e-91 339.0 219 72.6
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 6.1e-90 335.1 225 71.1
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 3.4e-88 329.3 182 84.6
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 7.2e-83 311.6 217 66.8
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 2.1e-82 310.1 191 75.9
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 4.7e-82 308.9 223 68.2
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 5.2e-81 305.4 186 78.5
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.2e-79 300.1 183 77.6
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 1.8e-73 280.4 173 75.7
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 1.5e-67 260.8 220 58.6
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 9.5e-67 258.1 216 56.0
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 6.8e-65 251.9 258 54.3
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 4.1e-62 242.7 230 55.7
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 8.3e-55 218.4 123 85.4
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 2.3e-52 210.3 223 47.1
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.7e-47 194.1 223 49.8
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.2e-47 193.7 221 50.2
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 3.3e-43 179.9 107 79.4
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 4.9e-39 166.0 101 77.2
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.1e-38 164.9 101 76.2
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 9.3e-38 161.8 232 42.7
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 6.6e-36 155.6 97 75.3
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 4.0e-25 119.8 75 74.7
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.1e-17 95.1 163 37.4
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.1e-17 93.6 97 52.6
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 5.7e-11 72.8 37 89.2
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 9.3e-06 55.5 40 65.0


User provided reference genes

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