Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.4e-69 265.4 135 100.0
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.4e-69 265.4 135 100.0
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 1.4e-45 186.4 130 64.6
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 2.1e-44 182.6 134 62.7
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 2.7e-44 182.2 132 68.2
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 3.5e-44 181.8 132 68.2
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 4.6e-44 181.4 133 64.7
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 7.8e-44 180.6 133 63.2
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 1.0e-43 180.3 132 67.4
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 1.3e-43 179.9 130 63.1
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 1.7e-43 179.5 130 61.5
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 2.3e-43 179.1 130 61.5
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 5.1e-43 177.9 131 64.9
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 6.6e-43 177.6 132 65.2
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 6.6e-43 177.6 130 63.8
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 8.6e-43 177.2 130 63.1
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 1.1e-42 176.8 130 62.3
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 1.1e-42 176.8 134 61.2
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.5e-42 176.4 131 64.1
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 1.9e-42 176.0 130 61.5
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 1.9e-42 176.0 134 63.4
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 2.5e-42 175.6 133 63.2
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 3.3e-42 175.3 129 63.6
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 4.3e-42 174.9 130 60.8
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 4.3e-42 174.9 134 61.9
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 5.6e-42 174.5 132 64.4
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 9.5e-42 173.7 136 61.0
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.2e-41 173.3 131 63.4
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 1.6e-41 172.9 130 61.5
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 1.6e-41 172.9 136 62.5
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 2.1e-41 172.6 131 61.1
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 2.1e-41 172.6 130 61.5
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 2.1e-41 172.6 131 61.8
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 2.8e-41 172.2 132 61.4
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 2.8e-41 172.2 130 62.3
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 3.6e-41 171.8 130 61.5
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 3.6e-41 171.8 130 63.8
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 3.6e-41 171.8 133 61.7
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 4.7e-41 171.4 142 60.6
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 4.7e-41 171.4 130 60.8
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 4.7e-41 171.4 130 60.8
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 8.1e-41 170.6 132 61.4
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 1.4e-40 169.9 133 60.9
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 1.8e-40 169.5 130 62.3
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 3.1e-40 168.7 129 60.5
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 4.0e-40 168.3 156 55.8
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 4.0e-40 168.3 135 60.7
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 6.8e-40 167.5 132 61.4
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 6.8e-40 167.5 130 59.2
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 8.9e-40 167.2 131 59.5
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 8.9e-40 167.2 132 62.9
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 8.9e-40 167.2 132 60.6
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 8.9e-40 167.2 130 60.0
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 8.9e-40 167.2 132 62.9
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.2e-39 166.8 132 60.6
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 1.5e-39 166.4 130 60.0
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 2.0e-39 166.0 130 60.0
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 2.0e-39 166.0 131 59.5
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 3.4e-39 165.2 132 61.4
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 3.4e-39 165.2 131 59.5
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 5.8e-39 164.5 131 59.5
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 7.6e-39 164.1 130 58.5
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 9.9e-39 163.7 130 57.7
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 9.9e-39 163.7 131 58.8
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.3e-38 163.3 131 61.8
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 1.3e-38 163.3 132 57.6
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 1.3e-38 163.3 132 57.6
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 1.3e-38 163.3 132 57.6
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 1.7e-38 162.9 130 57.7
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 2.2e-38 162.5 130 57.7
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 3.8e-38 161.8 131 58.0
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 4.9e-38 161.4 131 59.5
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 4.9e-38 161.4 131 58.8
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 4.9e-38 161.4 132 56.8
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 1.4e-37 159.8 138 55.8
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 2.4e-37 159.1 135 59.3
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 7.1e-37 157.5 131 55.7
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 9.2e-37 157.1 131 57.3
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 2.1e-36 156.0 116 64.7
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 2.7e-36 155.6 192 45.8
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 1.3e-35 153.3 132 59.8
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 1.7e-35 152.9 131 56.5
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 9.6e-34 147.1 131 53.4
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 2.1e-33 146.0 135 54.8
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.1e-33 146.0 130 58.5
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 8.1e-33 144.1 108 65.7
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.5e-31 139.8 103 64.1
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 3.4e-31 138.7 89 70.8
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 2.2e-30 136.0 130 54.6
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 1.2e-20 103.6 134 46.3
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 1.2e-20 103.6 103 47.6
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 1.8e-19 99.8 94 52.1
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.3e-17 93.6 92 52.2
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 1.3e-14 83.6 87 51.7
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 7.1e-13 77.8 71 53.5
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 1.3e-11 73.6 74 45.9
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 1.1e-08 63.9 80 41.2
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 2.6e-07 59.3 102 36.3
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 7.6e-07 57.8 38 63.2


User provided reference genes

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