Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02488 Sequoiadendron giganteum HOM05D006462 ORTHO05D008067 2.2e-94 349.0 178 100.0
TAR627G0872 Trochodendron aralioides HOM05D006462 ORTHO05D008067 5.5e-45 184.9 156 59.0
Eucgr.D01035 Eucalyptus grandis HOM05D006462 ORTHO05D008067 1.2e-44 183.7 154 59.1
Ciclev10015603m.g Citrus clementina HOM05D006462 ORTHO05D008067 1.8e-43 179.9 154 59.1
Dinv10269 Davidia involucrata HOM05D006462 ORTHO05D008067 5.1e-43 178.3 154 56.5
PSO675G5440 Papaver somniferum HOM05D006462 ORTHO05D008067 1.1e-42 177.2 156 58.3
HanXRQChr04g0115281 Helianthus annuus HOM05D006462 ORTHO05D008067 2.5e-42 176.0 160 53.1
Gohir.D10G047600 Gossypium hirsutum HOM05D006462 ORTHO05D008067 3.3e-42 175.6 160 56.2
Migut.H01302 Erythranthe guttata HOM05D006462 ORTHO05D008067 4.3e-42 175.3 159 54.7
Gorai.011G050700 Gossypium raimondii HOM05D006462 ORTHO05D008067 5.6e-42 174.9 160 56.2
QL03p039440 Quercus lobata HOM05D006462 ORTHO05D008067 5.6e-42 174.9 154 56.5
Gohir.A10G046300 Gossypium hirsutum HOM05D006462 ORTHO05D008067 9.6e-42 174.1 160 56.2
AagrBONN_evm.TU.Sc2ySwM_117.1618 Anthoceros agrestis HOM05D006462 ORTHO05D008067 1.6e-41 173.3 156 58.3
Duzib235G0723 Durio zibethinus HOM05D006462 ORTHO05D008067 1.6e-41 173.3 156 58.3
ATR0763G016 Amborella trichopoda HOM05D006462 ORTHO05D008067 2.8e-41 172.6 154 55.8
CSS0006730 Camellia sinensis var. sinensis HOM05D006462 ORTHO05D008067 3.7e-41 172.2 154 56.5
CiPaw.09G151400 Carya illinoinensis HOM05D006462 ORTHO05D008067 4.8e-41 171.8 156 53.8
SGA_v2.0_scaffold51G18669 Striga asiatica HOM05D006462 ORTHO05D008067 4.8e-41 171.8 156 55.8
CANSAT35G0316 Cannabis sativa HOM05D006462 ORTHO05D008067 1.4e-40 170.2 154 55.8
COL.COLO4_30938 Corchorus olitorius HOM05D006462 ORTHO05D008067 1.4e-40 170.2 156 55.8
PSO675G4077 Papaver somniferum HOM05D006462 ORTHO05D008067 1.4e-40 170.2 156 55.8
Cpa.g.sc192.4 Carica papaya HOM05D006462 ORTHO05D008067 1.8e-40 169.9 154 57.1
Cfa004797 Carpinus fangiana HOM05D006462 ORTHO05D008067 1.8e-40 169.9 154 54.5
Haze_10391 Corylus avellana HOM05D006462 ORTHO05D008067 1.8e-40 169.9 154 55.2
TWI73G0634 Tripterygium wilfordii HOM05D006462 ORTHO05D008067 1.8e-40 169.9 154 55.8
Glyma.15G127800 Glycine max HOM05D006462 ORTHO05D008067 2.4e-40 169.5 154 56.5
Potri.015G112500 Populus trichocarpa HOM05D006462 ORTHO05D008067 2.4e-40 169.5 154 53.9
Aqoxy4G00016 Aquilegia oxysepala HOM05D006462 ORTHO05D008067 3.1e-40 169.1 154 54.5
Atru.chr10.574 Acer truncatum HOM05D006462 ORTHO05D008067 4.0e-40 168.7 154 55.8
Cc09_g06660 Coffea canephora HOM05D006462 ORTHO05D008067 4.0e-40 168.7 156 51.9
ECA232G4418 Erigeron canadensis HOM05D006462 ORTHO05D008067 4.0e-40 168.7 154 51.9
Sabra15G0134200 Salix brachista HOM05D006462 ORTHO05D008067 4.0e-40 168.7 154 53.2
MSTRG.14813 Avicennia marina HOM05D006462 ORTHO05D008067 6.9e-40 167.9 154 53.9
Thhalv10000927m.g Eutrema salsugineum HOM05D006462 ORTHO05D008067 6.9e-40 167.9 157 53.5
MD10G1238000 Malus domestica HOM05D006462 ORTHO05D008067 6.9e-40 167.9 154 54.5
Sp2g09990 Schrenkiella parvula HOM05D006462 ORTHO05D008067 6.9e-40 167.9 157 53.5
FAN16G0781 Fragaria x ananassa HOM05D006462 ORTHO05D008067 9.0e-40 167.5 154 54.5
Nn7g38003 Nelumbo nucifera HOM05D006462 ORTHO05D008067 9.0e-40 167.5 154 53.9
Lalb_Chr15g0088641 Lupinus albus HOM05D006462 ORTHO05D008067 1.5e-39 166.8 154 55.8
BcaC06g31570 Brassica carinata HOM05D006462 ORTHO05D008067 2.0e-39 166.4 157 52.9
A06p46730 Brassica napus HOM05D006462 ORTHO05D008067 2.0e-39 166.4 157 52.9
BraA06t27545Z Brassica rapa HOM05D006462 ORTHO05D008067 2.0e-39 166.4 157 52.9
FAN21G3298 Fragaria x ananassa HOM05D006462 ORTHO05D008067 2.0e-39 166.4 154 54.5
BcaC06g34485 Brassica carinata HOM05D006462 ORTHO05D008067 2.6e-39 166.0 157 52.2
C07p27950 Brassica napus HOM05D006462 ORTHO05D008067 2.6e-39 166.0 157 52.2
BolC7t43328H Brassica oleracea HOM05D006462 ORTHO05D008067 2.6e-39 166.0 157 52.2
Glyma.09G021500 Glycine max HOM05D006462 ORTHO05D008067 2.6e-39 166.0 154 55.8
Thecc.06G136400 Theobroma cacao HOM05D006462 ORTHO05D008067 2.6e-39 166.0 156 53.8
arahy.Tifrunner.gnm1.ann1.2J20F7 Arachis hypogaea HOM05D006462 ORTHO05D008067 3.4e-39 165.6 159 54.1
arahy.Tifrunner.gnm1.ann1.CJL35W Arachis hypogaea HOM05D006462 ORTHO05D008067 4.5e-39 165.2 159 54.1
CARHR177360 Cardamine hirsuta HOM05D006462 ORTHO05D008067 4.5e-39 165.2 157 51.6
DCAR_004313 Daucus carota HOM05D006462 ORTHO05D008067 5.8e-39 164.9 154 52.6
THA.LOC104812900 Tarenaya hassleriana HOM05D006462 ORTHO05D008067 5.8e-39 164.9 154 54.5
Carub.0008s0300 Capsella rubella HOM05D006462 ORTHO05D008067 7.6e-39 164.5 157 51.6
Hma1.2p1_0365F.1_g136800 Hydrangea macrophylla HOM05D006462 ORTHO05D008067 7.6e-39 164.5 156 53.8
Hma1.2p1_0365F.1_g136810 Hydrangea macrophylla HOM05D006462 ORTHO05D008067 7.6e-39 164.5 156 53.8
AL8G14020 Arabidopsis lyrata HOM05D006462 ORTHO05D008067 1.7e-38 163.3 157 52.2
FAN25G3296 Fragaria x ananassa HOM05D006462 ORTHO05D008067 1.7e-38 163.3 154 53.2
Os12g0630700 Oryza sativa ssp. japonica HOM05D006462 ORTHO05D008067 1.7e-38 163.3 155 53.5
RcHm_v2.0_Chr5g0019301 Rosa chinensis HOM05D006462 ORTHO05D008067 1.7e-38 163.3 154 53.2
Sopen02g018560 Solanum pennellii HOM05D006462 ORTHO05D008067 2.9e-38 162.5 154 50.0
AT5G45170 Arabidopsis thaliana HOM05D006462 ORTHO05D008067 3.8e-38 162.2 157 52.2
Lsat_1_v5_gn_8_117040 Lactuca sativa HOM05D006462 ORTHO05D008067 3.8e-38 162.2 154 52.6
CAN.G675.12 Capsicum annuum HOM05D006462 ORTHO05D008067 4.9e-38 161.8 154 50.0
Peaxi162Scf00195g00131 Petunia axillaris HOM05D006462 ORTHO05D008067 4.9e-38 161.8 154 50.0
VMungo0540G1781 Vigna mungo HOM05D006462 ORTHO05D008067 4.9e-38 161.8 154 54.5
Nitab4.5_0011847g0040 Nicotiana tabacum HOM05D006462 ORTHO05D008067 6.5e-38 161.4 154 50.0
Phvul.006G130700 Phaseolus vulgaris HOM05D006462 ORTHO05D008067 6.5e-38 161.4 154 53.9
SalBow7G1415 Salvia bowleyana HOM05D006462 ORTHO05D008067 6.5e-38 161.4 154 52.6
Zm00001eb032640 Zea mays HOM05D006462 ORTHO05D008067 6.5e-38 161.4 154 55.2
Medtr2g029350 Medicago truncatula HOM05D006462 ORTHO05D008067 8.4e-38 161.0 154 53.2
Ca_00797_v3 Cicer arietinum L. HOM05D006462 ORTHO05D008067 1.1e-37 160.6 159 52.2
PGSC0003DMG400021145 Solanum tuberosum HOM05D006462 ORTHO05D008067 1.4e-37 160.2 154 49.4
Solyc02g069410.4 Solanum lycopersicum HOM05D006462 ORTHO05D008067 2.5e-37 159.5 154 49.4
PGR083G2188 Punica granatum HOM05D006462 ORTHO05D008067 5.5e-37 158.3 157 51.0
EL10Ac8g19520 Beta vulgaris HOM05D006462 ORTHO05D008067 7.1e-37 157.9 158 53.8
Lj6g0000446 Lotus japonicus HOM05D006462 ORTHO05D008067 1.6e-36 156.8 154 54.5
Mapoly0106s0006 Marchantia polymorpha HOM05D006462 ORTHO05D008067 4.6e-36 155.2 145 55.2
Rhsim13G0127700 Rhododendron simsii HOM05D006462 ORTHO05D008067 6.0e-36 154.8 144 54.2
TPR.G26539 Trifolium pratense HOM05D006462 ORTHO05D008067 6.0e-36 154.8 154 52.6
Aa31LG9G7960 Aethionema arabicum HOM05D006462 ORTHO05D008067 3.9e-35 152.1 190 44.7
Psat1g169320 Pisum sativum HOM05D006462 ORTHO05D008067 5.1e-35 151.8 154 51.9
Pp3c10_270 Physcomitrium patens HOM05D006462 ORTHO05D008067 8.7e-35 151.0 145 55.9
Lj2A355T38 Lonicera japonica HOM05D006462 ORTHO05D008067 1.9e-34 149.8 126 57.1
AUR62034022 Chenopodium quinoa HOM05D006462 ORTHO05D008067 3.3e-34 149.1 158 51.3
GSVIVG01001717001 Vitis vinifera HOM05D006462 ORTHO05D008067 5.7e-34 148.3 157 50.3
Sed0017395 Sechium edule HOM05D006462 ORTHO05D008067 1.3e-33 147.1 154 50.6
MD10G1237600 Malus domestica HOM05D006462 ORTHO05D008067 6.3e-33 144.8 154 47.4
SMO358G0034 Selaginella moellendorffii HOM05D006462 ORTHO05D008067 8.2e-33 144.4 157 49.7
FvH4_3g11870 Fragaria vesca HOM05D006462 ORTHO05D008067 3.1e-32 142.5 154 49.4
MD10G1237500 Malus domestica HOM05D006462 ORTHO05D008067 3.1e-32 142.5 154 46.8
ClCG01G025490 Citrullus lanatus HOM05D006462 ORTHO05D008067 1.5e-31 140.2 154 47.4
vmacro03491 Vaccinium macrocarpon HOM05D006462 ORTHO05D008067 2.6e-31 139.4 158 49.4
CsaV3_6G052750 Cucumis sativus L. HOM05D006462 ORTHO05D008067 7.6e-31 137.9 154 47.4
MBI18_g37401_MAGBIO Magnolia biondii HOM05D006462 ORTHO05D008067 2.9e-30 136.0 156 46.8
MELO3C007035.2 Cucumis melo HOM05D006462 ORTHO05D008067 5.0e-30 135.2 154 46.1
Nitab4.5_0005250g0020 Nicotiana tabacum HOM05D006462 ORTHO05D008067 9.3e-29 131.0 130 48.5
CSS0042902 Camellia sinensis var. sinensis HOM05D006462 ORTHO05D008067 1.8e-27 126.7 112 56.2
RcHm_v2.0_Chr5g0019341 Rosa chinensis HOM05D006462 ORTHO05D008067 8.2e-25 117.9 106 55.7
AUR62043004 Chenopodium quinoa HOM05D006462 ORTHO05D008067 1.1e-24 117.5 154 46.8
unitig_21.g20206 Utricularia gibba HOM05D006462 ORTHO05D008067 1.4e-24 117.1 141 46.8
HPP92_012287 Vanilla planifolia HOM05D006462 ORTHO05D008067 1.3e-22 110.5 154 40.3
Sc16g0001760 Simmondsia chinensis HOM05D006462 ORTHO05D008067 6.1e-12 75.1 77 51.9
CBR_g32011 Chara braunii HOM05D006462 ORTHO05D008067 6.7e-11 71.6 188 27.1
Manes.16G054132 Manihot esculenta HOM05D006462 ORTHO05D008067 2.4e-08 63.2 49 61.2


User provided reference genes

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