Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02421 Sequoiadendron giganteum HOM05D006897 ORTHO05D008825 2.2e-67 258.8 129 100.0
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 6.5e-32 141.0 105 58.1
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 5.5e-31 137.9 105 57.1
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 7.2e-31 137.5 105 56.2
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 9.5e-31 137.1 131 49.6
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 1.2e-30 136.7 112 53.6
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 1.2e-30 136.7 105 55.2
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 6.1e-30 134.4 105 55.2
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 8.0e-30 134.0 112 49.1
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 1.4e-29 133.3 104 54.8
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 1.4e-29 133.3 112 50.0
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 1.4e-29 133.3 105 54.3
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 2.3e-29 132.5 105 56.2
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 2.3e-29 132.5 105 55.2
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 5.2e-29 131.3 105 55.2
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 8.8e-29 130.6 105 53.3
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 1.2e-28 130.2 105 54.3
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 1.2e-28 130.2 105 53.3
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 1.2e-28 130.2 105 53.3
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 1.2e-28 130.2 105 53.3
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 1.2e-28 130.2 105 53.3
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 1.2e-28 130.2 105 53.3
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 1.2e-28 130.2 105 52.4
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 1.5e-28 129.8 112 49.1
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 2.0e-28 129.4 105 53.3
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 2.6e-28 129.0 105 52.4
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 3.4e-28 128.6 105 53.3
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 3.4e-28 128.6 105 52.4
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 4.4e-28 128.3 105 53.3
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 4.4e-28 128.3 111 50.5
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 4.4e-28 128.3 107 50.5
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 7.5e-28 127.5 105 51.4
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 7.5e-28 127.5 105 52.4
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 9.8e-28 127.1 105 51.4
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 9.8e-28 127.1 107 53.3
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 1.3e-27 126.7 105 53.3
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 1.3e-27 126.7 107 52.3
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 1.3e-27 126.7 107 52.3
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 1.3e-27 126.7 107 52.3
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 1.7e-27 126.3 105 51.4
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 1.7e-27 126.3 108 51.9
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 2.2e-27 125.9 105 53.3
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 2.8e-27 125.6 107 49.5
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 3.7e-27 125.2 103 48.5
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 3.7e-27 125.2 105 52.4
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 3.7e-27 125.2 105 51.4
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 4.9e-27 124.8 107 48.6
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 4.9e-27 124.8 107 51.4
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 4.9e-27 124.8 105 52.4
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 8.3e-27 124.0 104 48.1
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 2.4e-26 122.5 105 47.6
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 2.4e-26 122.5 105 49.5
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 2.4e-26 122.5 105 50.5
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 3.1e-26 122.1 109 50.5
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 4.1e-26 121.7 105 50.5
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 5.4e-26 121.3 105 50.5
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 5.4e-26 121.3 105 49.5
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 7.0e-26 120.9 105 48.6
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 9.2e-26 120.6 105 48.6
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 9.2e-26 120.6 105 47.6
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 9.2e-26 120.6 105 48.6
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 1.6e-25 119.8 105 46.7
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.6e-25 119.8 105 48.6
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 1.6e-25 119.8 105 46.7
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 2.7e-25 119.0 105 49.5
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 2.7e-25 119.0 105 48.6
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 2.7e-25 119.0 102 51.0
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 3.5e-25 118.6 103 47.6
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 4.5e-25 118.2 105 51.4
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 5.9e-25 117.9 105 47.6
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 5.9e-25 117.9 105 45.7
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 7.8e-25 117.5 105 46.7
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 1.3e-24 116.7 105 47.6
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 1.7e-24 116.3 105 46.7
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 2.9e-24 115.5 105 46.7
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 2.9e-24 115.5 107 46.7
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 3.8e-24 115.2 105 49.5
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 3.8e-24 115.2 113 46.9
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 5.0e-24 114.8 101 50.5
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 6.6e-24 114.4 109 45.0
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 6.6e-24 114.4 109 45.9
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 6.6e-24 114.4 105 46.7
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 1.5e-23 113.2 107 45.8
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 5.6e-23 111.3 122 42.6
SMO134G0180 Selaginella moellendorffii HOM05D006897 ORTHO05D008825 5.6e-23 111.3 108 43.5
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 9.5e-23 110.5 148 39.2
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 1.2e-22 110.2 105 47.6
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 2.1e-22 109.4 105 47.6
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 2.8e-22 109.0 88 52.3
Zm00001eb369960 Zea mays HOM05D006897 ORTHO05D008825 2.8e-22 109.0 106 42.5
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 3.6e-22 108.6 88 51.1
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 1.4e-21 106.7 113 46.0
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 1.4e-21 106.7 106 44.3
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 1.4e-21 106.7 88 46.6
Zm00001eb151640 Zea mays HOM05D006897 ORTHO05D008825 1.4e-21 106.7 106 41.5
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 2.6e-20 102.4 88 47.7
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 7.5e-20 100.9 88 47.7
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 7.5e-20 100.9 90 45.6
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 2.2e-19 99.4 91 45.1
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 3.7e-19 98.6 121 41.3
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 1.1e-18 97.1 75 52.0
Rhsim04G0141800 Rhododendron simsii HOM05D006897 ORTHO05D008825 3.2e-18 95.5 79 45.6
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 4.1e-18 95.1 94 42.6
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 5.9e-17 91.3 91 42.9
Duzib106G0008 Durio zibethinus HOM05D006897 ORTHO05D008825 1.0e-16 90.5 77 46.8
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 6.6e-16 87.8 107 44.9
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 3.3e-15 85.5 66 54.5
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 8.0e-14 80.9 68 52.9
Actinidia32484 Actinidia chinensis HOM05D006897 ORTHO05D008825 2.3e-13 79.3 65 43.1
SalBow3G3382 Salvia bowleyana HOM05D006897 ORTHO05D008825 1.5e-12 76.6 129 32.6
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 2.0e-12 76.3 67 47.8
HPP92_010165 Vanilla planifolia HOM05D006897 ORTHO05D008825 9.8e-12 73.9 71 45.1
Sabra16G0184400 Salix brachista HOM05D004505 ORTHO05D005249 8.6e-08 60.8 43 58.1
Sabra04G0106300 Salix brachista HOM05D006897 ORTHO05D008825 3.6e-06 55.5 39 53.8


User provided reference genes

Program Settings