Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02343 Sequoiadendron giganteum HOM05D004983 ORTHO05D005847 3.5e-46 188.0 96 100.0
COL.COLO4_20718 Corchorus olitorius HOM05D004983 ORTHO05D005847 1.6e-30 136.0 94 68.1
QL10p014085 Quercus lobata HOM05D004983 ORTHO05D005847 4.6e-30 134.4 96 71.9
GSVIVG01008095001 Vitis vinifera HOM05D004983 ORTHO05D005847 6.0e-30 134.0 95 71.6
Prupe.5G182700 Prunus persica HOM05D004983 ORTHO05D005847 1.3e-29 132.9 95 68.4
arahy.Tifrunner.gnm1.ann1.GD66SW Arachis hypogaea HOM05D004983 ORTHO05D005847 2.3e-29 132.1 96 67.7
Thecc.K0001100 Theobroma cacao HOM05D004983 ORTHO05D005847 5.0e-29 131.0 95 66.3
TPR.G37260 Trifolium pratense HOM05D004983 ORTHO05D005847 6.6e-29 130.6 96 67.7
Lj1g0016910 Lotus japonicus HOM05D004983 ORTHO05D005847 8.6e-29 130.2 95 67.4
Medtr0168s0080 Medicago truncatula HOM05D004983 ORTHO05D005847 1.1e-28 129.8 96 65.6
Psat5g181720 Pisum sativum HOM05D004983 ORTHO05D005847 1.1e-28 129.8 95 67.4
Ciclev10021875m.g Citrus clementina HOM05D004983 ORTHO05D005847 1.5e-28 129.4 96 67.7
Eucgr.B00384 Eucalyptus grandis HOM05D004983 ORTHO05D005847 1.5e-28 129.4 96 68.8
Glyma.06G188000 Glycine max HOM05D004983 ORTHO05D005847 1.9e-28 129.0 96 67.7
CANSAT80G1912 Cannabis sativa HOM05D004983 ORTHO05D005847 2.5e-28 128.6 96 65.6
Rhsim08G0163200 Rhododendron simsii HOM05D004983 ORTHO05D005847 2.5e-28 128.6 95 67.4
VMungo1309G2496 Vigna mungo HOM05D004983 ORTHO05D005847 2.5e-28 128.6 96 67.7
Nn4g22978 Nelumbo nucifera HOM05D004983 ORTHO05D005847 3.3e-28 128.3 97 69.1
Potri.012G072800 Populus trichocarpa HOM05D004983 ORTHO05D005847 3.3e-28 128.3 96 66.7
Aqoxy3G00847 Aquilegia oxysepala HOM05D004983 ORTHO05D005847 4.3e-28 127.9 97 67.0
arahy.Tifrunner.gnm1.ann1.TQ2Z41 Arachis hypogaea HOM05D004983 ORTHO05D005847 4.3e-28 127.9 95 66.3
CiPaw.12G021900 Carya illinoinensis HOM05D004983 ORTHO05D005847 5.6e-28 127.5 96 67.7
Hma1.2p1_0572F.1_g181120 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 7.3e-28 127.1 95 68.4
Hma1.2p1_4120F.1_g338320 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 7.3e-28 127.1 95 68.4
Duzib205G0093 Durio zibethinus HOM05D004983 ORTHO05D005847 1.2e-27 126.3 96 66.7
Gohir.A10G180700 Gossypium hirsutum HOM05D004983 ORTHO05D005847 1.2e-27 126.3 96 67.7
Gohir.D10G187500 Gossypium hirsutum HOM05D004983 ORTHO05D005847 1.2e-27 126.3 96 67.7
Gorai.011G210300 Gossypium raimondii HOM05D004983 ORTHO05D005847 1.2e-27 126.3 96 67.7
Hund04599 Selenicereus undatus HOM05D004983 ORTHO05D005847 1.2e-27 126.3 96 64.6
Glyma.04G177000 Glycine max HOM05D004983 ORTHO05D005847 2.1e-27 125.6 96 66.7
Lalb_Chr08g0236081 Lupinus albus HOM05D004983 ORTHO05D005847 2.1e-27 125.6 96 64.6
TAR374G1152 Trochodendron aralioides HOM05D000005 ORTHO05D000012 2.1e-27 125.6 95 67.4
AUR62008315 Chenopodium quinoa HOM05D004983 ORTHO05D005847 2.8e-27 125.2 96 61.5
Haze_07411 Corylus avellana HOM05D004983 ORTHO05D005847 2.8e-27 125.2 96 66.7
MD06G1184000 Malus domestica HOM05D004983 ORTHO05D005847 2.8e-27 125.2 96 67.7
Nn4g24106 Nelumbo nucifera HOM05D004983 ORTHO05D005847 2.8e-27 125.2 96 66.7
ATR0665G657 Amborella trichopoda HOM05D004983 ORTHO05D005847 3.6e-27 124.8 97 64.9
PGR044G0258 Punica granatum HOM05D004983 ORTHO05D005847 3.6e-27 124.8 96 65.6
Thhalv10014312m.g Eutrema salsugineum HOM05D004983 ORTHO05D005847 4.7e-27 124.4 97 62.9
Manes.06G098600 Manihot esculenta HOM05D004983 ORTHO05D005847 4.7e-27 124.4 93 65.6
CARHR200420 Cardamine hirsuta HOM05D004983 ORTHO05D005847 6.2e-27 124.0 97 62.9
FvH4_5g15990 Fragaria vesca HOM05D004983 ORTHO05D005847 8.0e-27 123.6 96 65.6
TWI75G1117 Tripterygium wilfordii HOM05D004983 ORTHO05D005847 8.0e-27 123.6 94 64.9
vmacro19336 Vaccinium macrocarpon HOM05D004983 ORTHO05D005847 8.0e-27 123.6 94 63.8
Zm00001eb107660 Zea mays HOM05D004983 ORTHO05D005847 8.0e-27 123.6 90 67.8
Atru.chr9.2363 Acer truncatum HOM05D004983 ORTHO05D005847 1.1e-26 123.2 96 64.6
BolC2t06531H Brassica oleracea HOM05D004983 ORTHO05D005847 1.1e-26 123.2 96 61.5
CsaV3_1G001940 Cucumis sativus L. HOM05D004983 ORTHO05D005847 1.1e-26 123.2 95 65.3
Dinv13111 Davidia involucrata HOM05D004983 ORTHO05D005847 1.1e-26 123.2 95 67.4
Phvul.009G183500 Phaseolus vulgaris HOM05D004983 ORTHO05D005847 1.1e-26 123.2 93 65.6
Sabra12G0052000 Salix brachista HOM05D004983 ORTHO05D005847 1.1e-26 123.2 96 63.5
Sp6g30930 Schrenkiella parvula HOM05D004983 ORTHO05D005847 1.1e-26 123.2 97 61.9
Sc12g0005910 Simmondsia chinensis HOM05D004983 ORTHO05D005847 1.4e-26 122.9 96 64.6
AUR62021780 Chenopodium quinoa HOM05D004983 ORTHO05D005847 1.8e-26 122.5 95 60.0
Ciclev10032272m.g Citrus clementina HOM05D004983 ORTHO05D005847 1.8e-26 122.5 95 65.3
AT5G13050 Arabidopsis thaliana HOM05D004983 ORTHO05D005847 2.3e-26 122.1 97 61.9
BraA02t05144Z Brassica rapa HOM05D001227 ORTHO05D001082 2.3e-26 122.1 96 60.4
DCAR_016523 Daucus carota HOM05D004983 ORTHO05D005847 2.3e-26 122.1 95 62.1
FAN13G0935 Fragaria x ananassa HOM05D004983 ORTHO05D005847 2.3e-26 122.1 95 65.3
FAN18G0171 Fragaria x ananassa HOM05D004983 ORTHO05D005847 2.3e-26 122.1 95 65.3
AagrBONN_evm.TU.Sc2ySwM_362.273 Anthoceros agrestis HOM05D004983 ORTHO05D005847 3.1e-26 121.7 90 62.2
FAN04G0333 Fragaria x ananassa HOM05D004983 ORTHO05D005847 3.1e-26 121.7 96 64.6
PSO591G0429 Papaver somniferum HOM05D004983 ORTHO05D005847 3.1e-26 121.7 97 67.0
RcHm_v2.0_Chr7g0180081 Rosa chinensis HOM05D004983 ORTHO05D005847 3.1e-26 121.7 96 63.5
Peaxi162Scf00496g00013 Petunia axillaris HOM05D004983 ORTHO05D005847 5.2e-26 120.9 92 67.4
EL10Ac5g10876 Beta vulgaris HOM05D004983 ORTHO05D005847 6.8e-26 120.6 92 64.1
Carub.0006s1121 Capsella rubella HOM05D004983 ORTHO05D005847 6.8e-26 120.6 97 61.9
Lj9A456T34 Lonicera japonica HOM05D004983 ORTHO05D005847 6.8e-26 120.6 89 66.3
HPP92_014218 Vanilla planifolia HOM05D004983 ORTHO05D005847 6.8e-26 120.6 96 63.5
HPP92_026476 Vanilla planifolia HOM05D004983 ORTHO05D005847 6.8e-26 120.6 96 63.5
C09p64060 Brassica napus HOM05D004983 ORTHO05D005847 8.9e-26 120.2 95 61.1
Dinv31146 Davidia involucrata HOM05D004983 ORTHO05D005847 8.9e-26 120.2 94 64.9
Os07g0578600 Oryza sativa ssp. japonica HOM05D004983 ORTHO05D005847 8.9e-26 120.2 97 61.9
A02p01650 Brassica napus HOM05D001227 ORTHO05D001082 1.2e-25 119.8 94 60.6
CSS0013980 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 1.2e-25 119.8 94 64.9
Solyc03g113590.3 Solanum lycopersicum HOM05D004983 ORTHO05D005847 1.2e-25 119.8 92 66.3
Sopen03g032630 Solanum pennellii HOM05D004983 ORTHO05D005847 1.5e-25 119.4 92 65.2
PGSC0003DMG400024570 Solanum tuberosum HOM05D004983 ORTHO05D005847 1.5e-25 119.4 92 65.2
A10p25150 Brassica napus HOM05D004983 ORTHO05D005847 2.0e-25 119.0 95 61.1
BraA10t44577Z Brassica rapa HOM05D004983 ORTHO05D005847 2.0e-25 119.0 95 61.1
Cpa.g.sc203.7 Carica papaya HOM05D004983 ORTHO05D005847 2.0e-25 119.0 95 62.1
HanXRQChr02g0045351 Helianthus annuus HOM05D004983 ORTHO05D005847 2.0e-25 119.0 94 63.8
QL03p067725 Quercus lobata HOM05D004983 ORTHO05D005847 2.0e-25 119.0 96 62.5
AL6G23630 Arabidopsis lyrata HOM05D004983 ORTHO05D005847 2.6e-25 118.6 96 60.4
BolC9t59243H Brassica oleracea HOM05D004983 ORTHO05D005847 2.6e-25 118.6 95 61.1
CAN.G999.9 Capsicum annuum HOM05D004983 ORTHO05D005847 2.6e-25 118.6 92 64.1
QL03p067716 Quercus lobata HOM05D004983 ORTHO05D005847 2.6e-25 118.6 95 63.2
Aa31LG3G14620 Aethionema arabicum HOM05D004983 ORTHO05D005847 4.4e-25 117.9 97 59.8
BcaNung01856 Brassica carinata HOM05D001227 ORTHO05D001082 5.8e-25 117.5 94 60.6
C02p05860 Brassica napus HOM05D001227 ORTHO05D001082 5.8e-25 117.5 94 60.6
Atru.chr11.1910 Acer truncatum HOM05D004983 ORTHO05D005847 7.5e-25 117.1 95 64.2
Nitab4.5_0000026g0320 Nicotiana tabacum HOM05D004983 ORTHO05D005847 7.5e-25 117.1 92 64.1
Haze_12108 Corylus avellana HOM05D004983 ORTHO05D005847 9.8e-25 116.7 95 63.2
Gohir.D12G050100 Gossypium hirsutum HOM05D004983 ORTHO05D005847 9.8e-25 116.7 95 60.0
CSS0025366 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 1.3e-24 116.3 94 62.8
Gohir.A12G051800 Gossypium hirsutum HOM05D004983 ORTHO05D005847 1.3e-24 116.3 95 58.9
Cc04_g16050 Coffea canephora HOM05D004983 ORTHO05D005847 2.2e-24 115.5 95 63.2
Nitab4.5_0008162g0040 Nicotiana tabacum HOM05D004983 ORTHO05D005847 2.2e-24 115.5 92 63.0
Lsat_1_v5_gn_1_11380 Lactuca sativa HOM05D004983 ORTHO05D005847 2.9e-24 115.2 92 62.0
Mapoly0019s0150 Marchantia polymorpha HOM05D004983 ORTHO05D005847 2.9e-24 115.2 95 55.8
Oeu022186.1 Olea europaea HOM05D004983 ORTHO05D005847 2.9e-24 115.2 92 67.4
Peaxi162Scf00017g02122 Petunia axillaris HOM05D004983 ORTHO05D005847 2.9e-24 115.2 92 62.0
unitig_27.g25109 Utricularia gibba HOM05D000870 ORTHO05D005847 2.9e-24 115.2 92 59.8
Gorai.008G053300 Gossypium raimondii HOM05D004983 ORTHO05D005847 4.9e-24 114.4 95 58.9
Thecc.02G237100 Theobroma cacao HOM05D004983 ORTHO05D005847 6.4e-24 114.0 95 58.9
Prupe.1G263300 Prunus persica HOM05D004983 ORTHO05D005847 1.9e-23 112.5 95 62.1
SGA_v2.0_scaffold25G10860 Striga asiatica HOM05D004983 ORTHO05D005847 2.4e-23 112.1 94 62.8
SMO271G0141 Selaginella moellendorffii HOM05D004983 ORTHO05D005847 3.2e-23 111.7 95 57.9
Actinidia04943 Actinidia chinensis HOM05D004983 ORTHO05D005847 5.4e-23 110.9 79 69.6
CDE07G0592 Ceratophyllum demersum HOM05D004983 ORTHO05D005847 5.4e-23 110.9 97 56.7
arahy.Tifrunner.gnm1.ann1.N4VW2L Arachis hypogaea HOM05D004983 ORTHO05D005847 1.2e-22 109.8 94 58.5
RcHm_v2.0_Chr4g0445021 Rosa chinensis HOM05D004983 ORTHO05D005847 1.2e-22 109.8 94 58.5
arahy.Tifrunner.gnm1.ann1.G2IRY3 Arachis hypogaea HOM05D004983 ORTHO05D005847 1.6e-22 109.4 94 58.5
FvH4_4g35410 Fragaria vesca HOM05D004983 ORTHO05D005847 1.6e-22 109.4 95 58.9
FAN07G1154 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.6e-22 109.4 95 58.9
TPR.G19166 Trifolium pratense HOM05D004983 ORTHO05D005847 3.5e-22 108.2 78 67.9
Nitab4.5_0000710g0080 Nicotiana tabacum HOM05D004983 ORTHO05D005847 4.6e-22 107.8 92 59.8
Ah.11g048970 Amaranthus hybridus HOM05D004983 ORTHO05D005847 1.0e-21 106.7 83 61.4
AUR62021779 Chenopodium quinoa HOM05D004983 ORTHO05D005847 1.0e-21 106.7 83 61.4
Migut.I00071 Erythranthe guttata HOM05D004983 ORTHO05D005847 1.0e-21 106.7 94 58.5
CiPaw.05G143400 Carya illinoinensis HOM05D004983 ORTHO05D005847 1.3e-21 106.3 92 58.7
FAN12G3769 Fragaria x ananassa HOM05D004983 ORTHO05D005847 2.3e-21 105.5 95 57.9
Ah.02g112900 Amaranthus hybridus HOM05D004983 ORTHO05D005847 3.9e-21 104.8 83 61.4
FAN22G0524 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.5e-20 102.8 95 56.8
Dinv19894 Davidia involucrata HOM05D004983 ORTHO05D005847 2.5e-20 102.1 93 60.2
CBR_g34194 Chara braunii HOM05D004983 ORTHO05D005847 7.3e-20 100.5 93 51.6
Atru.chr11.1914 Acer truncatum HOM05D004983 ORTHO05D005847 2.1e-19 99.0 74 66.2
Ah.02g112940 Amaranthus hybridus HOM05D004983 ORTHO05D005847 2.1e-19 99.0 92 55.4
Nitab4.5_0002376g0010 Nicotiana tabacum HOM05D004983 ORTHO05D005847 2.8e-19 98.6 85 61.2
ECA247G1770 Erigeron canadensis HOM05D004983 ORTHO05D005847 2.3e-18 95.5 134 44.0
Cre09.g403293 Chlamydomonas reinhardtii HOM05D004983 ORTHO05D005847 2.9e-16 88.6 90 51.1
BcaNung01178 Brassica carinata HOM05D004983 ORTHO05D005847 1.4e-15 86.3 110 44.5
MCO01G728 Micromonas commoda HOM05D004983 ORTHO05D005847 2.1e-14 82.4 82 47.6
PRCOL_00002663 Prasinoderma coloniale HOM05D004983 ORTHO05D005847 7.8e-14 80.5 78 50.0
MELO3C017137.2 Cucumis melo HOM05D004983 ORTHO05D005847 3.0e-13 78.6 67 61.2
Duzib251G0645 Durio zibethinus HOM05D004983 ORTHO05D005847 1.1e-12 76.6 52 65.4
MD16G1082800 Malus domestica HOM05D004983 ORTHO05D005847 1.9e-12 75.9 95 46.3
Ca_28882_v3 Cicer arietinum L. HOM05D004983 ORTHO05D005847 3.2e-07 58.5 76 40.8


User provided reference genes

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