Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02284 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 4.5e-71 271.2 137 100.0
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 5.3e-40 167.9 114 74.6
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 1.5e-39 166.4 114 72.8
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.6e-39 165.6 114 73.7
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 2.6e-39 165.6 114 71.9
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 4.5e-39 164.9 114 71.1
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 5.9e-39 164.5 114 73.7
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 7.7e-39 164.1 114 72.8
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 1.3e-38 163.3 114 70.2
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 1.3e-38 163.3 114 70.2
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.7e-38 162.9 114 72.8
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 2.9e-38 162.2 116 71.6
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 2.9e-38 162.2 114 72.8
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 3.8e-38 161.8 114 69.3
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 3.8e-38 161.8 109 74.3
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 3.8e-38 161.8 114 69.3
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 5.0e-38 161.4 114 69.3
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 6.5e-38 161.0 114 69.3
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 8.5e-38 160.6 111 69.4
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 1.4e-37 159.8 114 67.5
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 1.4e-37 159.8 114 68.4
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 1.4e-37 159.8 112 71.4
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 1.9e-37 159.5 112 71.4
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 2.5e-37 159.1 109 71.6
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 2.5e-37 159.1 109 72.5
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 2.5e-37 159.1 114 68.4
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 2.5e-37 159.1 114 68.4
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 3.2e-37 158.7 109 72.5
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 3.2e-37 158.7 116 67.2
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 3.2e-37 158.7 114 71.9
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 4.2e-37 158.3 109 71.6
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 7.2e-37 157.5 114 68.4
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 7.2e-37 157.5 114 68.4
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 7.2e-37 157.5 114 67.5
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 7.2e-37 157.5 109 71.6
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 9.4e-37 157.1 111 67.6
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 9.4e-37 157.1 108 73.1
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 1.2e-36 156.8 114 68.4
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 1.6e-36 156.4 112 69.6
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 1.6e-36 156.4 114 68.4
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 2.1e-36 156.0 114 67.5
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 2.1e-36 156.0 124 65.3
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 2.7e-36 155.6 120 65.8
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 2.7e-36 155.6 114 67.5
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 2.7e-36 155.6 109 69.7
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 2.7e-36 155.6 108 72.2
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 3.6e-36 155.2 114 66.7
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 3.6e-36 155.2 114 67.5
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 4.7e-36 154.8 109 67.9
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 4.7e-36 154.8 114 70.2
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 4.7e-36 154.8 106 70.8
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 6.1e-36 154.5 106 70.8
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 6.1e-36 154.5 108 71.3
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 1.0e-35 153.7 114 67.5
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 1.0e-35 153.7 122 66.4
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 1.0e-35 153.7 106 69.8
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 1.8e-35 152.9 106 69.8
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 2.3e-35 152.5 106 68.9
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 3.0e-35 152.1 108 68.5
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 3.9e-35 151.8 121 65.3
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 3.9e-35 151.8 126 62.7
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 5.1e-35 151.4 106 67.0
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 5.1e-35 151.4 106 66.0
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 5.1e-35 151.4 106 67.0
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 6.7e-35 151.0 105 69.5
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 1.1e-34 150.2 106 71.7
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 1.1e-34 150.2 111 64.0
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 1.5e-34 149.8 108 70.4
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 2.0e-34 149.4 140 58.6
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 2.6e-34 149.1 118 60.2
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 4.4e-34 148.3 109 68.8
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 5.7e-34 147.9 108 71.3
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 5.7e-34 147.9 109 67.0
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 7.4e-34 147.5 114 64.9
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 7.4e-34 147.5 109 67.0
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 7.4e-34 147.5 114 64.9
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 9.7e-34 147.1 109 67.0
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 1.3e-33 146.7 109 67.9
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 1.3e-33 146.7 109 67.9
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 1.3e-33 146.7 109 67.9
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 1.3e-33 146.7 109 67.9
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 2.2e-33 146.0 109 67.9
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 2.2e-33 146.0 109 67.9
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 2.8e-33 145.6 108 65.7
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 3.7e-33 145.2 109 67.0
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 3.7e-33 145.2 108 65.7
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 3.7e-33 145.2 108 65.7
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 3.7e-33 145.2 110 68.2
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 4.8e-33 144.8 109 67.9
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 4.8e-33 144.8 109 67.9
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 4.8e-33 144.8 109 67.9
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 4.8e-33 144.8 109 67.9
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 4.8e-33 144.8 109 67.9
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 6.3e-33 144.4 108 64.8
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 8.2e-33 144.1 109 67.0
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 1.4e-32 143.3 108 65.7
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 3.1e-32 142.1 109 67.9
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 4.1e-32 141.7 106 63.2
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 5.3e-32 141.4 109 66.1
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.2e-31 140.2 109 68.8
RcHm_v2.0_Chr4g0408791 Rosa chinensis HOM05D005463 ORTHO05D006900 3.5e-31 138.7 105 68.6
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 1.4e-29 133.3 105 64.8
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 1.4e-29 133.3 94 70.2
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 1.4e-29 133.3 114 60.5
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 7.2e-29 131.0 101 65.3
arahy.Tifrunner.gnm1.ann1.UWT5DF Arachis hypogaea HOM05D005463 ORTHO05D006900 2.4e-24 115.9 71 77.5
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 2.4e-24 115.9 74 75.7
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 1.2e-23 113.6 74 73.0
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 1.2e-23 113.6 74 74.3
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 1.6e-23 113.2 108 50.9
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 1.3e-22 110.2 74 71.6
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 2.9e-22 109.0 73 74.0
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 6.5e-22 107.8 72 73.6
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 5.5e-21 104.8 121 47.1
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 2.1e-20 102.8 109 51.4
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 4.7e-20 101.7 65 70.8
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 2.3e-19 99.4 80 62.5
ATR0709G040 Amborella trichopoda HOM05D005463 ORTHO05D006900 2.8e-17 92.4 140 42.9
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 3.1e-16 89.0 114 49.1
MBI14_g30707_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.3e-14 83.6 62 71.0
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 4.2e-13 78.6 57 68.4
Nn3g19661 Nelumbo nucifera HOM05D005463 ORTHO05D006900 1.3e-09 67.0 111 41.4


User provided reference genes

Program Settings