Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02207 Sequoiadendron giganteum HOM05D002553 ORTHO05D002767 9.5e-43 176.4 87 100.0
Duzib177G0165 Durio zibethinus HOM05D002553 ORTHO05D002767 7.5e-24 113.6 77 67.5
PGR083G1620 Punica granatum HOM05D002553 ORTHO05D002767 9.9e-24 113.2 77 64.9
MBI17_g29610_MAGBIO Magnolia biondii HOM05D002553 ORTHO05D002767 1.3e-23 112.8 77 67.5
Gohir.D13G110400 Gossypium hirsutum HOM05D002553 ORTHO05D002767 2.2e-23 112.1 77 64.9
TWI12G0069 Tripterygium wilfordii HOM05D002553 ORTHO05D002767 2.2e-23 112.1 77 64.9
AUR62000869 Chenopodium quinoa HOM05D002553 ORTHO05D002767 2.9e-23 111.7 77 66.2
Gohir.A13G107100 Gossypium hirsutum HOM05D002553 ORTHO05D002767 3.7e-23 111.3 77 64.9
Gorai.013G123700 Gossypium raimondii HOM05D002553 ORTHO05D002767 3.7e-23 111.3 77 64.9
Zm00001eb017520 Zea mays HOM05D002553 ORTHO05D002767 4.9e-23 110.9 79 64.6
Peaxi162Scf00434g00216 Petunia axillaris HOM05D002553 ORTHO05D002767 6.4e-23 110.5 79 64.6
TPR.G2739 Trifolium pratense HOM05D002553 ORTHO05D002767 6.4e-23 110.5 77 64.9
GSVIVG01000009001 Vitis vinifera HOM05D002553 ORTHO05D002767 6.4e-23 110.5 79 63.3
AUR62005107 Chenopodium quinoa HOM05D002553 ORTHO05D002767 8.3e-23 110.2 77 64.9
Ca_10093_v3 Cicer arietinum L. HOM05D002553 ORTHO05D002767 1.4e-22 109.4 77 62.3
Hma1.2p1_0666F.1_g199470 Hydrangea macrophylla HOM05D002553 ORTHO05D002767 1.9e-22 109.0 77 64.9
Potri.005G039100 Populus trichocarpa HOM05D002553 ORTHO05D002767 1.9e-22 109.0 77 63.6
Medtr1g082470 Medicago truncatula HOM05D002553 ORTHO05D002767 2.4e-22 108.6 77 63.6
Sabra05G0037500 Salix brachista HOM05D002553 ORTHO05D002767 3.2e-22 108.2 77 63.6
TAR362G0623 Trochodendron aralioides HOM05D002553 ORTHO05D002767 3.2e-22 108.2 77 64.9
Eucgr.B02001 Eucalyptus grandis HOM05D002553 ORTHO05D002767 4.1e-22 107.8 77 63.6
MD04G1209000 Malus domestica HOM05D002553 ORTHO05D002767 4.1e-22 107.8 77 62.3
Medtr1g083370 Medicago truncatula HOM05D002553 ORTHO05D002767 4.1e-22 107.8 79 62.0
Nn4g26152 Nelumbo nucifera HOM05D002553 ORTHO05D002767 7.1e-22 107.1 77 62.3
Nitab4.5_0004271g0010 Nicotiana tabacum HOM05D002553 ORTHO05D002767 7.1e-22 107.1 77 62.3
Thecc.05G308000 Theobroma cacao HOM05D002553 ORTHO05D002767 7.1e-22 107.1 77 64.9
CDE05G0789 Ceratophyllum demersum HOM05D002553 ORTHO05D002767 9.2e-22 106.7 77 63.6
COL.COLO4_13515 Corchorus olitorius HOM05D002553 ORTHO05D002767 9.2e-22 106.7 77 61.0
Lj9C682T7 Lonicera japonica HOM05D002553 ORTHO05D002767 9.2e-22 106.7 77 63.6
vmacro19641 Vaccinium macrocarpon HOM05D002553 ORTHO05D002767 9.2e-22 106.7 77 63.6
BolC1t05708H Brassica oleracea HOM05D002553 ORTHO05D002767 1.2e-21 106.3 77 62.3
CAN.G1134.23 Capsicum annuum HOM05D002553 ORTHO05D002767 1.2e-21 106.3 77 63.6
CARHR079530 Cardamine hirsuta HOM05D002553 ORTHO05D002767 1.2e-21 106.3 77 61.0
Thhalv10003627m.g Eutrema salsugineum HOM05D002553 ORTHO05D002767 1.2e-21 106.3 77 63.6
Aqoxy5G00545 Aquilegia oxysepala HOM05D002553 ORTHO05D002767 1.6e-21 105.9 79 62.0
BraSC132t45517Z Brassica rapa HOM05D002553 ORTHO05D002767 1.6e-21 105.9 77 61.0
Glyma.10G156850 Glycine max HOM05D002553 ORTHO05D002767 1.6e-21 105.9 77 61.0
Nitab4.5_0006809g0010 Nicotiana tabacum HOM05D002553 ORTHO05D002767 1.6e-21 105.9 77 61.0
Ah.06g190110 Amaranthus hybridus HOM05D002553 ORTHO05D002767 2.1e-21 105.5 78 60.3
Ciclev10003913m.g Citrus clementina HOM05D002553 ORTHO05D002767 2.1e-21 105.5 77 64.9
EL10Ac4g09309 Beta vulgaris HOM05D002553 ORTHO05D002767 2.7e-21 105.1 77 62.3
Cfa006549 Carpinus fangiana HOM05D002553 ORTHO05D002767 2.7e-21 105.1 77 62.3
Psat6g149240 Pisum sativum HOM05D002553 ORTHO05D002767 2.7e-21 105.1 77 62.3
Haze_04233 Corylus avellana HOM05D002553 ORTHO05D002767 6.0e-21 104.0 79 59.5
Lj5g0009152 Lotus japonicus HOM05D002553 ORTHO05D002767 6.0e-21 104.0 77 62.3
Manes.09G163850 Manihot esculenta HOM05D002553 ORTHO05D002767 6.0e-21 104.0 77 62.3
Hund07047 Selenicereus undatus HOM05D002553 ORTHO05D002767 6.0e-21 104.0 77 59.7
Solyc01g098700.4 Solanum lycopersicum HOM05D002553 ORTHO05D002767 6.0e-21 104.0 77 61.0
ATR0626G263 Amborella trichopoda HOM05D002553 ORTHO05D002767 7.8e-21 103.6 77 61.0
DCAR_003314 Daucus carota HOM05D002553 ORTHO05D002767 7.8e-21 103.6 77 62.3
Dinv22901 Davidia involucrata HOM05D002553 ORTHO05D002767 7.8e-21 103.6 77 59.7
Sc09g0003340 Simmondsia chinensis HOM05D002553 ORTHO05D002767 7.8e-21 103.6 77 61.0
BcaB04g21368 Brassica carinata HOM05D002553 ORTHO05D002767 1.3e-20 102.8 77 59.7
BNapus_Darmor_BZH_scaffold_114p00250 Brassica napus HOM05D002553 ORTHO05D002767 1.3e-20 102.8 77 59.7
BraA09t36165Z Brassica rapa HOM05D002553 ORTHO05D002767 1.3e-20 102.8 78 55.1
CsaV3_2G004990 Cucumis sativus L. HOM05D002553 ORTHO05D002767 1.3e-20 102.8 77 62.3
HanXRQChr02g0037091 Helianthus annuus HOM05D002553 ORTHO05D002767 1.3e-20 102.8 77 63.6
Lalb_Chr18g0045531 Lupinus albus HOM05D002553 ORTHO05D002767 1.3e-20 102.8 77 59.7
TAR636G3134 Trochodendron aralioides HOM05D002553 ORTHO05D002767 1.3e-20 102.8 77 62.3
CiPaw.07G014800 Carya illinoinensis HOM05D002553 ORTHO05D002767 1.7e-20 102.4 77 62.3
QL03p004498 Quercus lobata HOM05D002553 ORTHO05D002767 1.7e-20 102.4 77 58.4
AL3G15610 Arabidopsis lyrata HOM05D002553 ORTHO05D002767 2.3e-20 102.1 77 59.7
AL6G39600 Arabidopsis lyrata HOM05D002553 ORTHO05D002767 2.3e-20 102.1 78 60.3
Cpa.g.sc48.14 Carica papaya HOM05D002553 ORTHO05D002767 2.3e-20 102.1 77 61.0
ECA247G0575 Erigeron canadensis HOM05D002553 ORTHO05D002767 2.3e-20 102.1 77 61.0
THA.LOC104802808 Tarenaya hassleriana HOM05D002553 ORTHO05D002767 2.3e-20 102.1 79 58.2
Atru.chr2.475 Acer truncatum HOM05D002553 ORTHO05D002767 3.0e-20 101.7 77 61.0
AT3G05190 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 3.0e-20 101.7 77 58.4
Cc02_g32710 Coffea canephora HOM05D002553 ORTHO05D002767 3.0e-20 101.7 77 61.0
Thhalv10020427m.g Eutrema salsugineum HOM05D002553 ORTHO05D002767 3.0e-20 101.7 77 58.4
Sp3g04040 Schrenkiella parvula HOM05D002553 ORTHO05D002767 3.0e-20 101.7 77 58.4
arahy.Tifrunner.gnm1.ann1.0VD1AP Arachis hypogaea HOM05D002553 ORTHO05D002767 3.9e-20 101.3 77 61.0
arahy.Tifrunner.gnm1.ann1.7PL8A0 Arachis hypogaea HOM05D002553 ORTHO05D002767 3.9e-20 101.3 77 61.0
A09p05260 Brassica napus HOM05D002553 ORTHO05D002767 3.9e-20 101.3 77 54.5
Carub.0003s0444 Capsella rubella HOM05D002553 ORTHO05D002767 3.9e-20 101.3 77 59.7
Dinv23976 Davidia involucrata HOM05D002553 ORTHO05D002767 3.9e-20 101.3 77 59.7
FAN14G0929 Fragaria x ananassa HOM05D002553 ORTHO05D002767 3.9e-20 101.3 79 55.7
Glyma.03G240100 Glycine max HOM05D002553 ORTHO05D002767 3.9e-20 101.3 77 61.0
MELO3C004297.2 Cucumis melo HOM05D002553 ORTHO05D002767 5.1e-20 100.9 77 59.7
Phvul.006G093911 Phaseolus vulgaris HOM05D002553 ORTHO05D002767 5.1e-20 100.9 77 61.0
Rhsim05G0144300 Rhododendron simsii HOM05D002553 ORTHO05D002767 5.1e-20 100.9 77 59.7
Sopen01g042240 Solanum pennellii HOM05D002553 ORTHO05D002767 5.1e-20 100.9 78 59.0
BcaNung02463 Brassica carinata HOM05D002553 ORTHO05D002767 6.6e-20 100.5 77 61.0
CARHR186010 Cardamine hirsuta HOM05D002553 ORTHO05D002767 6.6e-20 100.5 77 61.0
A06p37580 Brassica napus HOM05D002553 ORTHO05D002767 8.6e-20 100.1 77 61.0
C09p05740 Brassica napus HOM05D002553 ORTHO05D002767 8.6e-20 100.1 78 53.8
BolC9t53501H Brassica oleracea HOM05D002553 ORTHO05D002767 8.6e-20 100.1 78 53.8
BraA06t26677Z Brassica rapa HOM05D002553 ORTHO05D002767 8.6e-20 100.1 77 61.0
PSO210G1325 Papaver somniferum HOM05D002553 ORTHO05D002767 8.6e-20 100.1 79 59.5
PGSC0003DMG401028577 Solanum tuberosum HOM05D002553 ORTHO05D002767 8.6e-20 100.1 77 58.4
BcaNung04368 Brassica carinata HOM05D002553 ORTHO05D002767 1.1e-19 99.8 77 61.0
ClCG02G016020 Citrullus lanatus HOM05D002553 ORTHO05D002767 1.1e-19 99.8 77 57.1
Glyma.19G237000 Glycine max HOM05D002553 ORTHO05D002767 1.1e-19 99.8 77 59.7
AT5G27410 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 1.5e-19 99.4 77 59.7
FvH4_6g05350 Fragaria vesca HOM05D002553 ORTHO05D002767 1.5e-19 99.4 77 57.1
MD12G1223700 Malus domestica HOM05D002553 ORTHO05D002767 1.5e-19 99.4 77 58.4
C07p40730 Brassica napus HOM05D002553 ORTHO05D002767 1.9e-19 99.0 77 59.7
BolC7t44601H Brassica oleracea HOM05D002553 ORTHO05D002767 1.9e-19 99.0 77 59.7
Sed0024851 Sechium edule HOM05D002553 ORTHO05D002767 1.9e-19 99.0 77 58.4
Carub.0006s2513 Capsella rubella HOM05D002553 ORTHO05D002767 2.5e-19 98.6 77 59.7
VMungo0540G1597 Vigna mungo HOM05D002553 ORTHO05D002767 3.3e-19 98.2 77 61.0
BcaC04g23681 Brassica carinata HOM05D002553 ORTHO05D002767 4.3e-19 97.8 77 53.2
Aa31LG5G15560 Aethionema arabicum HOM05D002553 ORTHO05D002767 5.6e-19 97.4 77 57.1
Prupe.6G330000 Prunus persica HOM05D002553 ORTHO05D002767 5.6e-19 97.4 77 58.4
FAN14G5684 Fragaria x ananassa HOM05D002553 ORTHO05D002767 9.5e-19 96.7 77 55.8
CANSAT54G1986 Cannabis sativa HOM05D002553 ORTHO05D002767 1.2e-18 96.3 77 59.7
Lsat_1_v5_gn_1_25020 Lactuca sativa HOM05D002553 ORTHO05D002767 2.8e-18 95.1 77 59.7
FAN09G0499 Fragaria x ananassa HOM05D002553 ORTHO05D002767 4.7e-18 94.4 74 56.8
Migut.B01190 Erythranthe guttata HOM05D002553 ORTHO05D002767 8.1e-18 93.6 77 54.5
BcaC04g23682 Brassica carinata HOM05D002553 ORTHO05D002767 1.1e-17 93.2 75 52.0
FAN05G4192 Fragaria x ananassa HOM05D002553 ORTHO05D002767 8.9e-17 90.1 95 47.4
FAN05G5165 Fragaria x ananassa HOM05D002553 ORTHO05D002767 8.9e-17 90.1 95 47.4
RcHm_v2.0_Chr3g0454121 Rosa chinensis HOM05D002553 ORTHO05D002767 8.9e-17 90.1 77 53.2
MSTRG.16977 Avicennia marina HOM05D002553 ORTHO05D002767 1.7e-15 85.9 77 50.6
AagrBONN_evm.TU.Sc2ySwM_344.2814 Anthoceros agrestis HOM05D002553 ORTHO05D002767 6.4e-15 84.0 77 53.2
Pp3c16_17790 Physcomitrium patens HOM05D002553 ORTHO05D002767 1.4e-14 82.8 77 50.6
Mapoly0006s0260 Marchantia polymorpha HOM05D002553 ORTHO05D002767 2.4e-14 82.0 77 51.9
MSTRG.5079 Avicennia marina HOM05D002553 ORTHO05D002767 1.6e-13 79.3 77 49.4
SGA_v2.0_scaffold43G16279 Striga asiatica HOM05D002553 ORTHO05D002767 2.1e-13 79.0 77 46.8
Pp3c6_5420 Physcomitrium patens HOM05D002553 ORTHO05D002767 1.0e-12 76.6 77 46.8
SalBow5G4087 Salvia bowleyana HOM05D002553 ORTHO05D002767 1.3e-12 76.3 77 50.6
SMO356G0084 Selaginella moellendorffii HOM05D002553 ORTHO05D002767 1.5e-11 72.8 67 50.7
TPR.G3038 Trifolium pratense HOM05D002553 ORTHO05D002767 8.1e-10 67.0 82 43.9
HPP92_001399 Vanilla planifolia HOM05D002553 ORTHO05D002767 5.3e-09 64.3 45 64.4
Medtr8g036730 Medicago truncatula HOM05D002553 ORTHO05D002767 6.9e-09 63.9 78 43.6
HPP92_001339 Vanilla planifolia HOM05D002553 ORTHO05D002767 9.0e-09 63.5 45 62.2
Lsat_1_v5_gn_9_20280 Lactuca sativa HOM05D005041 ORTHO05D002973 2.4e-06 55.5 51 52.9


User provided reference genes

Program Settings