Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02165 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 4.8e-54 214.2 102 100.0
SEGI_21352 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 1.3e-35 152.9 97 75.3
SEGI_30314 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 6.5e-35 150.6 76 90.8
SEGI_28596 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 6.8e-24 114.0 59 88.1
SEGI_21411 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 4.1e-21 104.8 48 97.9
Pp3c5_19100 Physcomitrium patens HOM05D003482 ORTHO05D004194 2.9e-19 98.6 57 71.9
SEGI_11287 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 5.0e-19 97.8 59 81.4
AagrBONN_evm.TU.Sc2ySwM_228.3219 Anthoceros agrestis HOM05D003482 ORTHO05D004194 8.6e-19 97.1 57 73.7
Pp3c16_18060 Physcomitrium patens HOM05D003482 ORTHO05D004194 8.6e-19 97.1 63 65.1
Eucgr.C03989 Eucalyptus grandis HOM05D003482 ORTHO05D004194 1.1e-18 96.7 89 52.8
MBI13_g31548_MAGBIO Magnolia biondii HOM05D003482 ORTHO05D004194 4.3e-18 94.7 57 70.2
DCAR_004550 Daucus carota HOM05D003482 ORTHO05D004194 7.3e-18 94.0 57 70.2
CDE05G0655 Ceratophyllum demersum HOM05D003482 ORTHO05D004194 1.6e-17 92.8 57 68.4
HPP92_015810 Vanilla planifolia HOM05D003482 ORTHO05D004194 1.6e-17 92.8 58 67.2
Lsat_1_v5_gn_6_15541 Lactuca sativa HOM05D003482 ORTHO05D004194 2.1e-17 92.4 57 68.4
SMO353G0165 Selaginella moellendorffii HOM05D003482 ORTHO05D004194 2.1e-17 92.4 57 66.7
MSTRG.11822 Avicennia marina HOM05D003482 ORTHO05D004194 2.8e-17 92.0 57 66.7
Ciclev10007354m.g Citrus clementina HOM05D003482 ORTHO05D004194 2.8e-17 92.0 57 66.7
COL.COLO4_18624 Corchorus olitorius HOM05D003482 ORTHO05D004194 2.8e-17 92.0 57 68.4
Oeu059294.1 Olea europaea HOM05D003482 ORTHO05D004194 2.8e-17 92.0 57 68.4
PSO423G0073 Papaver somniferum HOM05D003482 ORTHO05D004194 3.6e-17 91.7 57 68.4
PSO596G0002 Papaver somniferum HOM05D003482 ORTHO05D004194 3.6e-17 91.7 57 68.4
PSO755G0001 Papaver somniferum HOM05D003482 ORTHO05D004194 3.6e-17 91.7 57 68.4
Hund19390 Selenicereus undatus HOM05D003482 ORTHO05D004194 3.6e-17 91.7 64 62.5
Aqoxy7G02727 Aquilegia oxysepala HOM05D003482 ORTHO05D004194 4.7e-17 91.3 57 68.4
CSS0039275 Camellia sinensis var. sinensis HOM05D003482 ORTHO05D004194 4.7e-17 91.3 57 66.7
Dinv11875 Davidia involucrata HOM05D003482 ORTHO05D004194 4.7e-17 91.3 57 66.7
ECA240G1915 Erigeron canadensis HOM05D003482 ORTHO05D004194 4.7e-17 91.3 57 66.7
HanXRQChr13g0411821 Helianthus annuus HOM05D003482 ORTHO05D004194 4.7e-17 91.3 57 66.7
Lj7C753G1 Lonicera japonica HOM05D003482 ORTHO05D004194 4.7e-17 91.3 57 66.7
Nn8g40986 Nelumbo nucifera HOM05D003482 ORTHO05D004194 4.7e-17 91.3 57 66.7
Os06g0701300 Oryza sativa ssp. japonica HOM05D003482 ORTHO05D004194 4.7e-17 91.3 57 64.9
Actinidia14155 Actinidia chinensis HOM05D003482 ORTHO05D004194 6.1e-17 90.9 57 63.2
ClCG11G013930 Citrullus lanatus HOM05D003482 ORTHO05D004194 6.1e-17 90.9 57 66.7
CsaV3_3G047320 Cucumis sativus L. HOM05D003482 ORTHO05D004194 6.1e-17 90.9 57 66.7
Lsat_1_v5_gn_5_60380 Lactuca sativa HOM05D003482 ORTHO05D004194 6.1e-17 90.9 57 66.7
Mapoly0007s0194 Marchantia polymorpha HOM05D003482 ORTHO05D004194 6.1e-17 90.9 57 70.2
PGR044G0156 Punica granatum HOM05D003482 ORTHO05D004194 6.1e-17 90.9 57 68.4
QL12p026010 Quercus lobata HOM05D003482 ORTHO05D004194 6.1e-17 90.9 57 66.7
SalBow4G3081 Salvia bowleyana HOM05D003482 ORTHO05D004194 6.1e-17 90.9 57 66.7
Zm00001eb272880 Zea mays HOM05D003482 ORTHO05D004194 6.1e-17 90.9 57 61.4
Atru.chr7.2677 Acer truncatum HOM05D003482 ORTHO05D004194 8.0e-17 90.5 57 66.7
CANSAT25G1343 Cannabis sativa HOM05D003482 ORTHO05D004194 8.0e-17 90.5 57 66.7
MELO3C003597.2 Cucumis melo HOM05D003482 ORTHO05D004194 8.0e-17 90.5 57 66.7
Duzib168G0916 Durio zibethinus HOM05D003482 ORTHO05D004194 8.0e-17 90.5 57 64.9
Rhsim07G0170800 Rhododendron simsii HOM05D003482 ORTHO05D004194 8.0e-17 90.5 57 64.9
Sc14g0002010 Simmondsia chinensis HOM05D003482 ORTHO05D004194 8.0e-17 90.5 57 70.2
vmacro05100 Vaccinium macrocarpon HOM05D003482 ORTHO05D004194 8.0e-17 90.5 57 64.9
HPP92_015798 Vanilla planifolia HOM05D003482 ORTHO05D004194 8.0e-17 90.5 57 66.7
ECA233G2479 Erigeron canadensis HOM05D003482 ORTHO05D004194 1.0e-16 90.1 57 66.7
HanXRQChr03g0081371 Helianthus annuus HOM05D003482 ORTHO05D004194 1.0e-16 90.1 89 48.3
Sed0005804 Sechium edule HOM05D003482 ORTHO05D004194 1.0e-16 90.1 57 68.4
CiPaw.07G208900 Carya illinoinensis HOM05D003482 ORTHO05D004194 1.4e-16 89.7 57 66.7
SGA_v2.0_scaffold27G11648 Striga asiatica HOM05D003482 ORTHO05D004194 1.4e-16 89.7 57 64.9
Thecc.09G004000 Theobroma cacao HOM05D003482 ORTHO05D004194 1.4e-16 89.7 57 64.9
TAR626G0827 Trochodendron aralioides HOM05D003482 ORTHO05D004194 1.4e-16 89.7 57 66.7
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 1.4e-16 89.7 57 66.7
GSVIVG01035556001 Vitis vinifera HOM05D003482 ORTHO05D004194 1.4e-16 89.7 57 66.7
Migut.A00459 Erythranthe guttata HOM05D003482 ORTHO05D004194 1.8e-16 89.4 57 64.9
Manes.16G137200 Manihot esculenta HOM05D003482 ORTHO05D004194 1.8e-16 89.4 57 64.9
Prupe.1G455100 Prunus persica HOM05D003482 ORTHO05D004194 1.8e-16 89.4 57 64.9
Cpa.g.sc328.6 Carica papaya HOM05D003482 ORTHO05D004194 2.3e-16 89.0 57 64.9
Cfa013321 Carpinus fangiana HOM05D003482 ORTHO05D004194 2.3e-16 89.0 57 64.9
Gohir.A05G066000 Gossypium hirsutum HOM05D003482 ORTHO05D004194 2.3e-16 89.0 57 66.7
Gohir.D05G068400 Gossypium hirsutum HOM05D003482 ORTHO05D004194 2.3e-16 89.0 57 66.7
Gorai.009G069300 Gossypium raimondii HOM05D003482 ORTHO05D004194 2.3e-16 89.0 57 66.7
Solyc08g074280.4 Solanum lycopersicum HOM05D003482 ORTHO05D004194 2.3e-16 89.0 57 66.7
TWI32G0788 Tripterygium wilfordii HOM05D003482 ORTHO05D004194 2.3e-16 89.0 57 64.9
TAR506G0002 Trochodendron aralioides HOM05D003482 ORTHO05D004194 2.3e-16 89.0 57 66.7
A06p35580 Brassica napus HOM05D003482 ORTHO05D004194 3.0e-16 88.6 57 64.9
C07p42960 Brassica napus HOM05D003482 ORTHO05D004194 3.0e-16 88.6 57 64.9
BolC7t44825H Brassica oleracea HOM05D003482 ORTHO05D004194 3.0e-16 88.6 57 64.9
BraA06t26483Z Brassica rapa HOM05D003482 ORTHO05D004194 3.0e-16 88.6 57 64.9
Glyma.14G139800 Glycine max HOM05D003482 ORTHO05D004194 3.0e-16 88.6 57 64.9
Glyma.17G188300 Glycine max HOM05D003482 ORTHO05D004194 3.0e-16 88.6 57 64.9
Lalb_Chr14g0362391 Lupinus albus HOM05D003482 ORTHO05D004194 3.0e-16 88.6 57 66.7
MD15G1101900 Malus domestica HOM05D003482 ORTHO05D004194 3.0e-16 88.6 59 61.0
Manes.03G001800 Manihot esculenta HOM05D003482 ORTHO05D004194 3.0e-16 88.6 57 63.2
Sopen08g022930 Solanum pennellii HOM05D003482 ORTHO05D004194 3.0e-16 88.6 57 64.9
EL10Ac2g03705 Beta vulgaris HOM05D003482 ORTHO05D004194 4.0e-16 88.2 57 68.4
BcaB07g29924 Brassica carinata HOM05D003482 ORTHO05D004194 4.0e-16 88.2 57 64.9
BcaC03g17943 Brassica carinata HOM05D003482 ORTHO05D004194 4.0e-16 88.2 57 64.9
A02p40080 Brassica napus HOM05D003482 ORTHO05D004194 4.0e-16 88.2 57 64.9
C02p60040 Brassica napus HOM05D003482 ORTHO05D004194 4.0e-16 88.2 57 64.9
BolC2t12059H Brassica oleracea HOM05D003482 ORTHO05D004194 4.0e-16 88.2 57 64.9
BraA02t08971Z Brassica rapa HOM05D003482 ORTHO05D004194 4.0e-16 88.2 57 64.9
Thhalv10003586m.g Eutrema salsugineum HOM05D003482 ORTHO05D004194 4.0e-16 88.2 57 64.9
MD08G1123100 Malus domestica HOM05D003482 ORTHO05D004194 4.0e-16 88.2 57 63.2
Sp2g22640 Schrenkiella parvula HOM05D003482 ORTHO05D004194 4.0e-16 88.2 57 64.9
THA.LOC104814963 Tarenaya hassleriana HOM05D003482 ORTHO05D004194 4.0e-16 88.2 57 64.9
ATR0626G323 Amborella trichopoda HOM05D003482 ORTHO05D004194 5.2e-16 87.8 63 60.3
Carub.0006s2266 Capsella rubella HOM05D003482 ORTHO05D004194 5.2e-16 87.8 57 64.9
CAN.G195.3 Capsicum annuum HOM05D003482 ORTHO05D004194 5.2e-16 87.8 57 66.7
FvH4_2g36370 Fragaria vesca HOM05D003482 ORTHO05D004194 5.2e-16 87.8 57 63.2
FAN15G0261 Fragaria x ananassa HOM05D003482 ORTHO05D004194 5.2e-16 87.8 57 63.2
FAN20G1504 Fragaria x ananassa HOM05D003482 ORTHO05D004194 5.2e-16 87.8 57 63.2
FAN27G0167 Fragaria x ananassa HOM05D003482 ORTHO05D004194 5.2e-16 87.8 57 63.2
Medtr1g008980 Medicago truncatula HOM05D003482 ORTHO05D004194 5.2e-16 87.8 57 66.7
Nitab4.5_0000970g0010 Nicotiana tabacum HOM05D003482 ORTHO05D004194 5.2e-16 87.8 57 66.7
Peaxi162Scf00213g01025 Petunia axillaris HOM05D003482 ORTHO05D004194 5.2e-16 87.8 57 66.7
Phvul.001G077100 Phaseolus vulgaris HOM05D003482 ORTHO05D004194 5.2e-16 87.8 57 64.9
Psat6g006000 Pisum sativum HOM05D003482 ORTHO05D004194 5.2e-16 87.8 57 66.7
RcHm_v2.0_Chr6g0305511 Rosa chinensis HOM05D003482 ORTHO05D004194 5.2e-16 87.8 57 63.2
HanXRQChr03g0082881 Helianthus annuus HOM05D003482 ORTHO05D004194 6.8e-16 87.4 57 64.9
Nitab4.5_0000919g0060 Nicotiana tabacum HOM05D003482 ORTHO05D004194 6.8e-16 87.4 57 64.9
Hund03269 Selenicereus undatus HOM05D003482 ORTHO05D004194 6.8e-16 87.4 57 66.7
Aa31LG11G4020 Aethionema arabicum HOM05D003482 ORTHO05D004194 8.9e-16 87.0 57 64.9
Ah.10g033820 Amaranthus hybridus HOM05D002718 ORTHO05D003269 8.9e-16 87.0 57 68.4
arahy.Tifrunner.gnm1.ann1.N6E37M Arachis hypogaea HOM05D003482 ORTHO05D004194 8.9e-16 87.0 57 63.2
MD15G1100800 Malus domestica HOM05D003482 ORTHO05D004194 8.9e-16 87.0 57 61.4
BcaNung01256 Brassica carinata HOM05D003482 ORTHO05D004194 1.2e-15 86.7 57 63.2
Ca_12826_v3 Cicer arietinum L. HOM05D003482 ORTHO05D004194 1.5e-15 86.3 57 64.9
Lj1g0006594 Lotus japonicus HOM05D003482 ORTHO05D004194 1.5e-15 86.3 57 63.2
AL6G36450 Arabidopsis lyrata HOM05D003482 ORTHO05D004194 2.0e-15 85.9 57 63.2
AT5G24810 Arabidopsis thaliana HOM05D003482 ORTHO05D004194 2.0e-15 85.9 57 63.2
CARHR188650 Cardamine hirsuta HOM05D003482 ORTHO05D004194 2.0e-15 85.9 57 63.2
Potri.018G003600 Populus trichocarpa HOM05D003482 ORTHO05D004194 2.6e-15 85.5 57 61.4
Sabra06G0214300 Salix brachista HOM05D003482 ORTHO05D004194 2.6e-15 85.5 61 57.4
Lalb_Chr22g0361011 Lupinus albus HOM05D003482 ORTHO05D004194 3.4e-15 85.1 57 64.9
Potri.018G003400 Populus trichocarpa HOM05D003482 ORTHO05D004194 4.4e-15 84.7 57 61.4
Sabra18G0002200 Salix brachista HOM05D003482 ORTHO05D004194 4.4e-15 84.7 57 61.4
Sabra18G0009100 Salix brachista HOM05D003482 ORTHO05D004194 4.4e-15 84.7 57 61.4
CBR_g4189 Chara braunii HOM05D003482 ORTHO05D004194 7.5e-15 84.0 63 57.1
Potri.018G000101 Populus trichocarpa HOM05D003482 ORTHO05D004194 1.7e-14 82.8 56 60.7
SMO353G0164 Selaginella moellendorffii HOM05D003482 ORTHO05D004194 3.7e-14 81.6 74 51.4
Potri.006G276600 Populus trichocarpa HOM05D003482 ORTHO05D004194 4.9e-14 81.3 57 57.9
COL.COLO4_18622 Corchorus olitorius HOM05D003482 ORTHO05D004194 2.4e-13 79.0 57 57.9
arahy.Tifrunner.gnm1.ann1.21Z9DD Arachis hypogaea HOM05D003482 ORTHO05D004194 6.0e-12 74.3 85 44.7
SEGI_31762 Sequoiadendron giganteum HOM05D000379 ORTHO05D000254 2.1e-09 65.9 29 96.6
SEGI_16224 Sequoiadendron giganteum HOM05D001707 ORTHO05D001694 2.8e-09 65.5 28 100.0
SEGI_40124 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 2.8e-09 65.5 28 100.0
SEGI_25823 Sequoiadendron giganteum HOM05D000022 ORTHO05D000306 6.2e-09 64.3 32 84.4
SEGI_25443 Sequoiadendron giganteum HOM05D000031 ORTHO05D050962 1.4e-08 63.2 27 100.0
SEGI_29901 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 1.4e-08 63.2 28 96.4
MELO3C031142.2 Cucumis melo HOM05D003482 ORTHO05D004194 1.8e-08 62.8 34 67.6
SEGI_20010 Sequoiadendron giganteum HOM05D002310 ORTHO05D002326 2.3e-08 62.4 30 90.0
SEGI_25854 Sequoiadendron giganteum HOM05D000093 ORTHO05D009660 5.2e-08 61.2 28 92.9
SEGI_14589 Sequoiadendron giganteum HOM05D000026 ORTHO05D000094 6.8e-08 60.8 27 96.3
SEGI_02366 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 9.8e-07 57.0 27 85.2
SEGI_27392 Sequoiadendron giganteum HOM05D000529 ORTHO05D000472 1.7e-06 56.2 29 79.3


User provided reference genes

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