Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02034 Sequoiadendron giganteum HOM05D003519 ORTHO05D021294 8.6e-81 303.5 146 100.0
AagrBONN_evm.TU.Sc2ySwM_117.2589 Anthoceros agrestis HOM05D026239 ORTHO05D021294 2.0e-21 106.3 97 47.4
Actinidia06577 Actinidia chinensis HOM05D003519 ORTHO05D004443 8.8e-09 64.3 85 44.7
CSS0008781 Camellia sinensis var. sinensis HOM05D003519 ORTHO05D004443 3.3e-08 62.4 83 42.2
CSS0040411 Camellia sinensis var. sinensis HOM05D003519 ORTHO05D004443 3.3e-08 62.4 83 42.2
Ah.04g157880 Amaranthus hybridus HOM05D003519 ORTHO05D004443 1.3e-07 60.5 84 41.7
Rhsim08G0000500 Rhododendron simsii HOM05D003519 ORTHO05D004443 1.7e-07 60.1 84 41.7
Lsat_1_v5_gn_2_36940 Lactuca sativa HOM05D003519 ORTHO05D004443 2.2e-07 59.7 84 39.3
Hund21800 Selenicereus undatus HOM05D003519 ORTHO05D004443 6.3e-07 58.2 83 38.6
AagrBONN_evm.TU.Sc2ySwM_368.1512 Anthoceros agrestis HOM05D003519 ORTHO05D021294 1.4e-06 57.0 111 33.3
Hma1.2p1_0310F.1_g121010 Hydrangea macrophylla HOM05D003519 ORTHO05D004443 1.8e-06 56.6 84 39.3
Nitab4.5_0003068g0020 Nicotiana tabacum HOM05D003519 ORTHO05D004443 1.8e-06 56.6 84 36.9
Potri.005G067300 Populus trichocarpa HOM05D003519 ORTHO05D004443 2.4e-06 56.2 91 35.2
RcHm_v2.0_Chr2g0122451 Rosa chinensis HOM05D003519 ORTHO05D004443 2.4e-06 56.2 95 36.8
Potri.007G102000 Populus trichocarpa HOM05D003519 ORTHO05D004443 3.1e-06 55.8 84 38.1
TAR625G0887 Trochodendron aralioides HOM05D003519 ORTHO05D004443 3.1e-06 55.8 83 34.9
AUR62000513 Chenopodium quinoa HOM05D003519 ORTHO05D004443 4.1e-06 55.5 84 38.1
ECA238G3965 Erigeron canadensis HOM05D003519 ORTHO05D004443 4.1e-06 55.5 84 36.9
CAN.G475.7 Capsicum annuum HOM05D003519 ORTHO05D004443 5.3e-06 55.1 84 36.9
Sabra05G0055300 Salix brachista HOM05D003519 ORTHO05D004443 5.3e-06 55.1 84 35.7
Sabra07G0084100 Salix brachista HOM05D003519 ORTHO05D004443 5.3e-06 55.1 84 36.9
arahy.Tifrunner.gnm1.ann1.CM19QL Arachis hypogaea HOM05D003519 ORTHO05D004443 7.0e-06 54.7 91 36.3
Sed0005441 Sechium edule HOM05D003519 ORTHO05D004443 7.0e-06 54.7 83 32.5
PGSC0003DMG400009336 Solanum tuberosum HOM05D003519 ORTHO05D004443 7.0e-06 54.7 84 35.7
Cpa.g.sc37.5 Carica papaya HOM05D003519 ORTHO05D004443 9.1e-06 54.3 84 35.7


User provided reference genes

Program Settings