Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02022 Sequoiadendron giganteum HOM05D004355 ORTHO05D005228 1.5e-304 1048.9 622 100.0
SEGI_31737 Sequoiadendron giganteum HOM05D004355 ORTHO05D005228 8.5e-61 239.2 580 31.9
TAR369G0267 Trochodendron aralioides HOM05D004355 ORTHO05D005228 3.0e-29 134.4 197 36.0
TAR636G0816 Trochodendron aralioides HOM05D004355 ORTHO05D005228 3.3e-28 131.0 181 37.0
ATR0048G009 Amborella trichopoda HOM05D004355 ORTHO05D005228 5.6e-28 130.2 181 37.0
CANSAT80G0576 Cannabis sativa HOM05D004355 ORTHO05D005228 3.6e-27 127.5 192 34.9
Aqoxy1G01202 Aquilegia oxysepala HOM05D004355 ORTHO05D005228 4.7e-27 127.1 192 35.9
TAR633G2000 Trochodendron aralioides HOM05D004355 ORTHO05D005228 2.3e-26 124.8 192 35.9
PSO339G4715 Papaver somniferum HOM05D004355 ORTHO05D005228 5.2e-26 123.6 181 35.4
CiPaw.10G132700 Carya illinoinensis HOM05D004355 ORTHO05D005228 6.8e-26 123.2 192 34.9
Duzib128G1889 Durio zibethinus HOM05D004355 ORTHO05D005228 2.0e-25 121.7 192 34.4
Manes.08G008600 Manihot esculenta HOM05D004355 ORTHO05D005228 5.8e-25 120.2 192 34.4
Potri.016G091400 Populus trichocarpa HOM05D004355 ORTHO05D005228 7.5e-25 119.8 192 33.3
QL07p044062 Quercus lobata HOM05D004355 ORTHO05D005228 2.2e-24 118.2 192 33.9
Eucgr.A01137 Eucalyptus grandis HOM05D004355 ORTHO05D005228 3.7e-24 117.5 192 33.3
Aa31LG5G22300 Aethionema arabicum HOM05D004355 ORTHO05D005228 4.9e-24 117.1 188 34.0
Duzib106G0643 Durio zibethinus HOM05D004355 ORTHO05D005228 6.4e-24 116.7 192 32.8
Sabra06G0099700 Salix brachista HOM05D004355 ORTHO05D005228 6.4e-24 116.7 192 32.3
Thecc.05G062900 Theobroma cacao HOM05D004355 ORTHO05D005228 6.4e-24 116.7 192 32.8
Manes.09G063900 Manihot esculenta HOM05D004355 ORTHO05D005228 8.3e-24 116.3 192 32.8
Nn2g13729 Nelumbo nucifera HOM05D004355 ORTHO05D005228 8.3e-24 116.3 192 33.3
Potri.006G126600 Populus trichocarpa HOM05D004355 ORTHO05D005228 8.3e-24 116.3 192 32.3
Sabra16G0096600 Salix brachista HOM05D004355 ORTHO05D005228 1.1e-23 115.9 192 32.3
Atru.chr8.1850 Acer truncatum HOM05D004355 ORTHO05D005228 1.4e-23 115.5 192 33.9
Lj1g0007988 Lotus japonicus HOM05D004355 ORTHO05D005228 1.4e-23 115.5 189 33.9
Lalb_Chr25g0289061 Lupinus albus HOM05D004355 ORTHO05D005228 1.4e-23 115.5 195 33.8
Sed0019590 Sechium edule HOM05D004355 ORTHO05D005228 1.4e-23 115.5 192 33.9
Cfa017577 Carpinus fangiana HOM05D004355 ORTHO05D005228 1.9e-23 115.2 192 33.3
Haze_20575 Corylus avellana HOM05D004355 ORTHO05D005228 1.9e-23 115.2 192 33.3
TWI74G0762 Tripterygium wilfordii HOM05D004355 ORTHO05D005228 1.9e-23 115.2 192 32.3
MELO3C009345.2 Cucumis melo HOM05D004355 ORTHO05D005228 3.2e-23 114.4 192 33.9
EL10Ac7g16576 Beta vulgaris HOM05D004355 ORTHO05D005228 4.1e-23 114.0 193 34.7
Duzib093G1016 Durio zibethinus HOM05D004355 ORTHO05D005228 5.4e-23 113.6 191 31.4
Glyma.03G182000 Glycine max HOM05D004355 ORTHO05D005228 5.4e-23 113.6 189 33.3
CsaV3_3G035850 Cucumis sativus L. HOM05D004355 ORTHO05D005228 7.0e-23 113.2 192 33.3
Gohir.A09G148600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 7.0e-23 113.2 192 32.3
Phvul.001G178100 Phaseolus vulgaris HOM05D004355 ORTHO05D005228 7.0e-23 113.2 192 32.3
Gohir.D09G144400 Gossypium hirsutum HOM05D004355 ORTHO05D005228 9.2e-23 112.8 192 32.3
Gorai.006G165700 Gossypium raimondii HOM05D004355 ORTHO05D005228 9.2e-23 112.8 192 32.3
Ciclev10011674m.g Citrus clementina HOM05D004355 ORTHO05D005228 1.2e-22 112.5 192 32.3
AL4G33360 Arabidopsis lyrata HOM05D004355 ORTHO05D005228 1.6e-22 112.1 188 31.4
COL.COLO4_26990 Corchorus olitorius HOM05D004355 ORTHO05D005228 1.6e-22 112.1 192 32.3
Sp4g19340 Schrenkiella parvula HOM05D004355 ORTHO05D005228 1.6e-22 112.1 191 32.5
Glyma.19G182500 Glycine max HOM05D004355 ORTHO05D005228 2.1e-22 111.7 189 32.3
Sc02g0001740 Simmondsia chinensis HOM05D004355 ORTHO05D005228 2.1e-22 111.7 192 33.3
TWI77G0715 Tripterygium wilfordii HOM05D004355 ORTHO05D005228 2.7e-22 111.3 192 31.8
PGR004G0459 Punica granatum HOM05D004355 ORTHO05D005228 3.5e-22 110.9 185 33.0
CSS0012498 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 4.6e-22 110.5 188 34.0
Cpa.g.sc92.114 Carica papaya HOM05D004355 ORTHO05D005228 4.6e-22 110.5 181 32.0
VMungo1383G3555 Vigna mungo HOM05D004355 ORTHO05D005228 4.6e-22 110.5 189 31.7
Hma1.2p1_1099F.1_g256870 Hydrangea macrophylla HOM05D004355 ORTHO05D005228 1.0e-21 109.4 193 32.1
Prupe.6G235000 Prunus persica HOM05D004355 ORTHO05D005228 1.0e-21 109.4 170 35.3
A05p08800 Brassica napus HOM05D004355 ORTHO05D005228 1.3e-21 109.0 188 30.3
DCAR_009301 Daucus carota HOM05D004355 ORTHO05D005228 1.3e-21 109.0 192 33.3
MD04G1095900 Malus domestica HOM05D004355 ORTHO05D005228 1.7e-21 108.6 170 35.9
CSS0033330 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 2.3e-21 108.2 181 32.0
CSS0041806 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 2.3e-21 108.2 181 32.0
BolC4t22685H Brassica oleracea HOM05D004355 ORTHO05D005228 3.0e-21 107.8 188 31.9
AUR62039881 Chenopodium quinoa HOM05D004355 ORTHO05D005228 3.0e-21 107.8 193 33.2
BraA05t19847Z Brassica rapa HOM05D004355 ORTHO05D005228 3.9e-21 107.5 188 30.3
Dinv35767 Davidia involucrata HOM05D004355 ORTHO05D003235 3.9e-21 107.5 193 33.2
AUR62040465 Chenopodium quinoa HOM05D004355 ORTHO05D005228 5.1e-21 107.1 193 33.2
ClCG10G020240 Citrullus lanatus HOM05D004355 ORTHO05D005228 5.1e-21 107.1 171 35.7
RcHm_v2.0_Chr3g0469941 Rosa chinensis HOM05D004355 ORTHO05D005228 5.1e-21 107.1 170 34.7
THA.LOC104823460 Tarenaya hassleriana HOM05D004355 ORTHO05D005228 5.1e-21 107.1 181 32.6
Ah.08g211740 Amaranthus hybridus HOM05D004355 ORTHO05D005228 6.6e-21 106.7 193 32.1
BcaC02g11829 Brassica carinata HOM05D004355 ORTHO05D005228 6.6e-21 106.7 188 31.4
MELO3C014220.2 Cucumis melo HOM05D004355 ORTHO05D005228 8.6e-21 106.3 192 31.8
unitig_746.g26764 Utricularia gibba HOM05D004355 ORTHO05D005228 8.6e-21 106.3 189 34.9
ClCG04G009160 Citrullus lanatus HOM05D004355 ORTHO05D005228 1.1e-20 105.9 192 31.8
Dinv37299 Davidia involucrata HOM05D004355 ORTHO05D005228 1.1e-20 105.9 193 34.2
ECA248G2910 Erigeron canadensis HOM05D004355 ORTHO05D005228 1.1e-20 105.9 192 30.7
C04p10920 Brassica napus HOM05D004355 ORTHO05D005228 1.5e-20 105.5 188 31.4
FAN05G2251 Fragaria x ananassa HOM05D004355 ORTHO05D005228 1.5e-20 105.5 170 33.5
Lalb_Chr01g0018741 Lupinus albus HOM05D004355 ORTHO05D005228 1.9e-20 105.1 190 32.6
SGA_v2.0_scaffold75G24855 Striga asiatica HOM05D004355 ORTHO05D005228 1.9e-20 105.1 192 32.8
MD12G1115900 Malus domestica HOM05D004355 ORTHO05D005228 2.5e-20 104.8 164 36.0
THA.LOC104806491 Tarenaya hassleriana HOM05D004355 ORTHO05D005228 3.3e-20 104.4 176 33.5
CsaV3_6G039740 Cucumis sativus L. HOM05D004355 ORTHO05D005228 4.3e-20 104.0 192 31.2
Pp3c13_8770 Physcomitrium patens HOM05D004355 ORTHO05D005228 4.3e-20 104.0 124 41.9
PGR004G2422 Punica granatum HOM05D004355 ORTHO05D005228 4.3e-20 104.0 168 33.9
Gohir.A01G139600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 5.6e-20 103.6 193 31.6
FAN02G3539 Fragaria x ananassa HOM05D004355 ORTHO05D005228 7.3e-20 103.2 170 32.9
FvH4_6g16100 Fragaria vesca HOM05D004355 ORTHO05D005228 9.5e-20 102.8 170 32.9
FAN14G0897 Fragaria x ananassa HOM05D004355 ORTHO05D005228 9.5e-20 102.8 170 32.9
FAN14G5907 Fragaria x ananassa HOM05D004355 ORTHO05D005228 9.5e-20 102.8 170 32.9
Actinidia19660 Actinidia chinensis HOM05D004355 ORTHO05D005228 1.2e-19 102.4 177 31.1
Migut.L01688 Erythranthe guttata HOM05D004355 ORTHO05D005228 1.2e-19 102.4 192 31.8
HanXRQChr11g0350251 Helianthus annuus HOM05D004355 ORTHO05D005228 1.2e-19 102.4 192 29.7
Ca_08851_v3 Cicer arietinum L. HOM05D004355 ORTHO05D005228 1.6e-19 102.1 178 29.8
Medtr7g101730 Medicago truncatula HOM05D004355 ORTHO05D005228 1.6e-19 102.1 178 29.8
Gohir.D01G128600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 2.1e-19 101.7 192 31.2
Gohir.D04G112100 Gossypium hirsutum HOM05D004355 ORTHO05D005228 2.1e-19 101.7 191 29.8
Gohir.A04G073200 Gossypium hirsutum HOM05D004355 ORTHO05D005228 2.8e-19 101.3 191 29.8
Gorai.009G416200 Gossypium raimondii HOM05D004355 ORTHO05D005228 2.8e-19 101.3 191 29.8
Zm00001eb221710 Zea mays HOM05D004355 ORTHO05D005228 4.7e-19 100.5 195 33.3
Rhsim04G0145100 Rhododendron simsii HOM05D004355 ORTHO05D005228 8.1e-19 99.8 188 30.9
Psat3g043400 Pisum sativum HOM05D004355 ORTHO05D005228 1.4e-18 99.0 178 29.8
SalBow5G3882 Salvia bowleyana HOM05D004355 ORTHO05D005228 1.4e-18 99.0 189 30.2
unitig_899.g15220 Utricularia gibba HOM05D002910 ORTHO05D003235 1.4e-18 99.0 202 30.2
Rhsim05G0179400 Rhododendron simsii HOM05D004355 ORTHO05D005228 1.8e-18 98.6 188 29.8
SalBow5G3919 Salvia bowleyana HOM05D004355 ORTHO05D005228 1.8e-18 98.6 189 30.2
vmacro08776 Vaccinium macrocarpon HOM05D004355 ORTHO05D005228 1.8e-18 98.6 188 30.9
MSTRG.26701 Avicennia marina HOM05D004355 ORTHO05D005228 5.2e-18 97.1 192 30.2
TPR.G9373 Trifolium pratense HOM05D004355 ORTHO05D005228 6.8e-18 96.7 178 29.2
Os10g0478400 Oryza sativa ssp. japonica HOM05D004355 ORTHO05D005228 1.5e-17 95.5 195 33.8
GSVIVG01025706001 Vitis vinifera HOM05D004355 ORTHO05D005228 1.5e-17 95.5 192 30.2
Cc06_g04030 Coffea canephora HOM05D004355 ORTHO05D005228 2.6e-17 94.7 192 28.6
vmacro20020 Vaccinium macrocarpon HOM05D004355 ORTHO05D005228 1.3e-16 92.4 188 28.2
HanXRQChr13g0399881 Helianthus annuus HOM05D004355 ORTHO05D005228 2.9e-16 91.3 188 28.7
PGSC0003DMG400035240 Solanum tuberosum HOM05D004355 ORTHO05D005228 4.9e-16 90.5 192 29.7
Nitab4.5_0002963g0100 Nicotiana tabacum HOM05D004355 ORTHO05D005228 6.4e-16 90.1 192 29.2
ECA233G2716 Erigeron canadensis HOM05D004355 ORTHO05D005228 8.3e-16 89.7 189 25.9
Solyc09g007950.3 Solanum lycopersicum HOM05D004355 ORTHO05D005228 2.4e-15 88.2 192 29.2
Sopen09g002770 Solanum pennellii HOM05D004355 ORTHO05D005228 2.4e-15 88.2 192 29.2
Zm00001eb045770 Zea mays HOM05D004355 ORTHO05D005228 2.4e-15 88.2 192 31.8
Migut.J00528 Erythranthe guttata HOM05D004355 ORTHO05D005228 4.1e-15 87.4 192 27.6
Nitab4.5_0000101g0300 Nicotiana tabacum HOM05D004355 ORTHO05D005228 9.2e-15 86.3 171 29.8
Peaxi162Scf00123g01123 Petunia axillaris HOM05D004355 ORTHO05D005228 2.1e-14 85.1 191 28.3
Lsat_1_v5_gn_6_31300 Lactuca sativa HOM05D004355 ORTHO05D005228 1.3e-13 82.4 169 26.0
CiPaw.09G174200 Carya illinoinensis HOM05D004355 ORTHO05D005228 1.1e-12 79.3 184 27.2
Sed0012541 Sechium edule HOM05D004355 ORTHO05D005228 1.9e-12 78.6 167 31.7
Actinidia31337 Actinidia chinensis HOM05D004355 ORTHO05D005228 3.3e-12 77.8 130 38.5
Lsat_1_v5_gn_6_31260 Lactuca sativa HOM05D004355 ORTHO05D005228 3.3e-12 77.8 192 24.0
FAN09G2758 Fragaria x ananassa HOM05D004355 ORTHO05D005228 5.6e-12 77.0 94 37.2
Lj2P114T36 Lonicera japonica HOM05D004355 ORTHO05D005228 6.2e-11 73.6 192 27.6
ECA233G2161 Erigeron canadensis HOM05D004355 ORTHO05D005228 2.4e-10 71.6 176 29.0
CARHR131530 Cardamine hirsuta HOM05D004355 ORTHO05D005228 3.1e-10 71.2 188 26.6
AT2G37035 Arabidopsis thaliana HOM05D004355 ORTHO05D005228 8.9e-10 69.7 188 25.0
Carub.0004s1891 Capsella rubella HOM05D004355 ORTHO05D005228 2.6e-09 68.2 188 25.0
Gorai.002G162400 Gossypium raimondii HOM05D004355 ORTHO05D005228 4.9e-08 63.9 140 28.6
Lsat_1_v5_gn_1_53141 Lactuca sativa HOM05D004355 ORTHO05D005228 6.0e-06 57.0 124 29.0


User provided reference genes

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