Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02021 Sequoiadendron giganteum HOM05D004435 ORTHO05D005103 4.5e-109 397.9 195 100.0
Zm00001eb356500 Zea mays HOM05D004435 ORTHO05D005103 6.8e-49 198.0 136 69.9
Os01g0551900 Oryza sativa ssp. japonica HOM05D004435 ORTHO05D005103 7.5e-48 194.5 123 74.8
Thecc.01G340200 Theobroma cacao HOM05D004435 ORTHO05D005103 1.7e-47 193.4 136 70.6
Sabra02G0140000 Salix brachista HOM05D004435 ORTHO05D005103 3.7e-47 192.2 121 73.6
COL.COLO4_06228 Corchorus olitorius HOM05D004435 ORTHO05D005103 4.9e-47 191.8 136 70.6
Lsat_1_v5_gn_4_33701 Lactuca sativa HOM05D004435 ORTHO05D005103 8.3e-47 191.0 121 76.0
Potri.002G173300 Populus trichocarpa HOM05D004435 ORTHO05D005103 1.1e-46 190.7 121 73.6
Eucgr.E00041 Eucalyptus grandis HOM05D004435 ORTHO05D005103 1.9e-46 189.9 121 72.7
GSVIVG01027171001 Vitis vinifera HOM05D004435 ORTHO05D005103 1.9e-46 189.9 121 74.4
Rhsim07G0003000 Rhododendron simsii HOM05D004435 ORTHO05D005103 3.2e-46 189.1 121 74.4
CSS0028718 Camellia sinensis var. sinensis HOM05D004435 ORTHO05D005103 4.1e-46 188.7 121 74.4
Gohir.D11G102800 Gossypium hirsutum HOM05D004435 ORTHO05D005103 9.2e-46 187.6 136 68.4
Gorai.007G109900 Gossypium raimondii HOM05D004435 ORTHO05D005103 9.2e-46 187.6 136 68.4
vmacro04283 Vaccinium macrocarpon HOM05D004435 ORTHO05D005103 9.2e-46 187.6 121 75.2
HanXRQChr17g0563351 Helianthus annuus HOM05D004435 ORTHO05D005103 1.2e-45 187.2 121 74.4
QL08p045721 Quercus lobata HOM05D004435 ORTHO05D005103 1.2e-45 187.2 121 72.7
Cfa003785 Carpinus fangiana HOM05D004435 ORTHO05D005103 1.6e-45 186.8 121 75.2
ECA234G2843 Erigeron canadensis HOM05D004435 ORTHO05D005103 1.6e-45 186.8 121 74.4
PSO135G0708 Papaver somniferum HOM05D004435 ORTHO05D005103 1.6e-45 186.8 121 73.6
FAN06G0620 Fragaria x ananassa HOM05D004435 ORTHO05D005103 2.1e-45 186.4 121 72.7
FAN06G2443 Fragaria x ananassa HOM05D004435 ORTHO05D005103 2.1e-45 186.4 121 72.7
Gohir.A11G098100 Gossypium hirsutum HOM05D004435 ORTHO05D005103 2.1e-45 186.4 136 67.6
Actinidia20252 Actinidia chinensis HOM05D004435 ORTHO05D005103 2.7e-45 186.0 121 74.4
Duzib133G0905 Durio zibethinus HOM05D004435 ORTHO05D005103 2.7e-45 186.0 136 68.4
FAN10G0386 Fragaria x ananassa HOM05D004435 ORTHO05D005103 2.7e-45 186.0 121 71.9
FAN10G3841 Fragaria x ananassa HOM05D004435 ORTHO05D005103 2.7e-45 186.0 121 71.9
RcHm_v2.0_Chr1g0360111 Rosa chinensis HOM05D004435 ORTHO05D005103 2.7e-45 186.0 121 71.9
DCAR_008666 Daucus carota HOM05D004435 ORTHO05D005103 6.0e-45 184.9 145 66.9
DCAR_008667 Daucus carota HOM05D004435 ORTHO05D005103 6.0e-45 184.9 145 66.9
FAN03G2945 Fragaria x ananassa HOM05D004435 ORTHO05D005103 6.0e-45 184.9 121 71.9
Glyma.07G054500 Glycine max HOM05D004435 ORTHO05D005103 6.0e-45 184.9 121 71.9
Atru.chr5.694 Acer truncatum HOM05D004435 ORTHO05D005103 7.8e-45 184.5 121 70.2
FvH4_7g16880 Fragaria vesca HOM05D004435 ORTHO05D005103 7.8e-45 184.5 121 71.9
Lj7A498G38 Lonicera japonica HOM05D004435 ORTHO05D005103 7.8e-45 184.5 121 73.6
MBI06_g44136_MAGBIO Magnolia biondii HOM05D004435 ORTHO05D005103 7.8e-45 184.5 121 71.9
MBI06_g46370_MAGBIO Magnolia biondii HOM05D004435 ORTHO05D005103 7.8e-45 184.5 121 71.9
Nitab4.5_0001763g0010 Nicotiana tabacum HOM05D004435 ORTHO05D005103 7.8e-45 184.5 121 74.4
Solyc01g096110.3 Solanum lycopersicum HOM05D004435 ORTHO05D005103 7.8e-45 184.5 121 74.4
Sopen01g039830 Solanum pennellii HOM05D004435 ORTHO05D005103 7.8e-45 184.5 121 74.4
TPR.G20238 Trifolium pratense HOM05D004435 ORTHO05D005103 7.8e-45 184.5 121 71.9
Manes.01G244500 Manihot esculenta HOM05D004435 ORTHO05D005103 1.3e-44 183.7 121 69.4
Prupe.2G190800 Prunus persica HOM05D004435 ORTHO05D005103 1.3e-44 183.7 121 71.9
MD01G1083800 Malus domestica HOM05D004435 ORTHO05D005103 1.7e-44 183.3 121 71.9
PSO384G1989 Papaver somniferum HOM05D004435 ORTHO05D005103 1.7e-44 183.3 121 71.9
Nn1g00298 Nelumbo nucifera HOM05D004435 ORTHO05D005103 2.3e-44 183.0 138 66.7
Phvul.010G115000 Phaseolus vulgaris HOM05D004435 ORTHO05D005103 2.3e-44 183.0 142 64.1
Lalb_Chr10g0100641 Lupinus albus HOM05D004435 ORTHO05D005103 3.0e-44 182.6 121 71.1
Medtr8g027425 Medicago truncatula HOM05D004435 ORTHO05D005103 3.0e-44 182.6 121 71.1
VMungo0331G1532 Vigna mungo HOM05D004435 ORTHO05D005103 3.0e-44 182.6 142 63.4
CANSAT56G0169 Cannabis sativa HOM05D004435 ORTHO05D005103 3.9e-44 182.2 136 65.4
Ciclev10018429m.g Citrus clementina HOM05D004435 ORTHO05D005103 3.9e-44 182.2 138 63.8
Lj3g0005802 Lotus japonicus HOM05D004435 ORTHO05D005103 3.9e-44 182.2 121 71.9
Migut.B01890 Erythranthe guttata HOM05D004435 ORTHO05D005103 6.6e-44 181.4 121 70.2
Psat4g214760 Pisum sativum HOM05D004435 ORTHO05D005103 6.6e-44 181.4 121 69.4
arahy.Tifrunner.gnm1.ann1.VXNL4X Arachis hypogaea HOM05D004435 ORTHO05D005103 8.6e-44 181.0 121 70.2
Peaxi162Scf00345g00125 Petunia axillaris HOM05D004435 ORTHO05D005103 1.1e-43 180.6 129 70.5
CiPaw.01G077800 Carya illinoinensis HOM05D004435 ORTHO05D005103 1.5e-43 180.3 121 71.1
CAN.G1415.18 Capsicum annuum HOM05D004435 ORTHO05D005103 1.9e-43 179.9 121 72.7
Cc02_g39580 Coffea canephora HOM05D004435 ORTHO05D005103 1.9e-43 179.9 136 67.6
SMO203G0146 Selaginella moellendorffii HOM05D004435 ORTHO05D005103 1.9e-43 179.9 138 63.8
Ca_23520_v3 Cicer arietinum L. HOM05D004435 ORTHO05D005103 2.5e-43 179.5 121 70.2
Dinv34221 Davidia involucrata HOM05D004435 ORTHO05D005103 2.5e-43 179.5 121 72.7
Hma1.2p1_0101F.1_g049290 Hydrangea macrophylla HOM05D004435 ORTHO05D005103 3.3e-43 179.1 125 67.2
PGR044G1747 Punica granatum HOM05D004435 ORTHO05D005103 3.3e-43 179.1 121 68.6
Sc01g0002520 Simmondsia chinensis HOM05D004435 ORTHO05D005103 3.3e-43 179.1 136 64.7
THA.LOC104802083 Tarenaya hassleriana HOM05D004435 ORTHO05D005103 3.3e-43 179.1 136 64.0
arahy.Tifrunner.gnm1.ann1.Y0VUSY Arachis hypogaea HOM05D004435 ORTHO05D005103 4.3e-43 178.7 121 69.4
MELO3C006012.2 Cucumis melo HOM05D004435 ORTHO05D005103 4.3e-43 178.7 136 66.2
CsaV3_3G007940 Cucumis sativus L. HOM05D004435 ORTHO05D005103 4.3e-43 178.7 136 66.2
ATR0605G027 Amborella trichopoda HOM05D004435 ORTHO05D005103 5.6e-43 178.3 136 66.9
Aa31LG1G27940 Aethionema arabicum HOM05D004435 ORTHO05D005103 9.5e-43 177.6 136 63.2
Sed0001978 Sechium edule HOM05D004435 ORTHO05D005103 9.5e-43 177.6 136 69.1
Aqoxy1G03073 Aquilegia oxysepala HOM05D004435 ORTHO05D005103 2.1e-42 176.4 121 67.8
ClCG05G000720 Citrullus lanatus HOM05D004435 ORTHO05D005103 2.8e-42 176.0 135 65.9
TWI14G0481 Tripterygium wilfordii HOM05D004435 ORTHO05D005103 3.6e-42 175.6 138 63.8
Hund27186 Selenicereus undatus HOM05D004435 ORTHO05D005103 4.7e-42 175.3 121 66.9
CARHR141900 Cardamine hirsuta HOM05D004435 ORTHO05D005103 6.2e-42 174.9 136 61.8
Ah.05g179380 Amaranthus hybridus HOM05D004435 ORTHO05D005103 8.1e-42 174.5 121 69.4
C04p01360 Brassica napus HOM05D004435 ORTHO05D005103 8.1e-42 174.5 136 63.2
BolC4t21789H Brassica oleracea HOM05D004435 ORTHO05D005103 8.1e-42 174.5 136 63.2
BraA05t19122Z Brassica rapa HOM05D004435 ORTHO05D005103 8.1e-42 174.5 136 63.2
AT2G46560 Arabidopsis thaliana HOM05D004435 ORTHO05D005103 1.4e-41 173.7 136 61.0
EL10Ac1g00244 Beta vulgaris HOM05D004435 ORTHO05D005103 1.4e-41 173.7 136 64.7
Thhalv10001279m.g Eutrema salsugineum HOM05D004435 ORTHO05D005103 1.4e-41 173.7 136 61.8
Carub.0004s2928 Capsella rubella HOM05D004435 ORTHO05D005103 1.8e-41 173.3 136 61.8
AL4G45990 Arabidopsis lyrata HOM05D004435 ORTHO05D005103 2.4e-41 172.9 136 61.8
Sp4g28610 Schrenkiella parvula HOM05D004435 ORTHO05D005103 3.1e-41 172.6 136 61.8
A05p01210 Brassica napus HOM05D004435 ORTHO05D005103 4.0e-41 172.2 136 62.5
Nitab4.5_0007244g0020 Nicotiana tabacum HOM05D004435 ORTHO05D005103 1.2e-40 170.6 145 61.4
BcaC02g12673 Brassica carinata HOM05D004435 ORTHO05D005103 2.0e-40 169.9 131 62.6
CDE10G1324 Ceratophyllum demersum HOM05D004435 ORTHO05D005103 4.4e-40 168.7 138 58.0
AagrBONN_evm.TU.Sc2ySwM_228.2861 Anthoceros agrestis HOM05D004435 ORTHO05D005103 1.4e-38 163.7 138 61.6
Atru.chr5.691 Acer truncatum HOM05D004435 ORTHO05D005103 2.4e-38 162.9 120 63.3
Pp3c3_34200 Physcomitrium patens HOM05D004435 ORTHO05D005103 3.2e-38 162.5 136 56.6
TAR374G0936 Trochodendron aralioides HOM05D004435 ORTHO05D005103 1.6e-37 160.2 138 61.6
HPP92_020189 Vanilla planifolia HOM05D004435 ORTHO05D005103 3.5e-37 159.1 121 61.2
Haze_15676 Corylus avellana HOM05D004435 ORTHO05D005103 4.7e-34 148.7 121 63.6
AUR62004511 Chenopodium quinoa HOM05D004435 ORTHO05D005103 1.3e-31 140.6 124 57.3
unitig_736.g22808 Utricularia gibba HOM05D004435 ORTHO05D005103 2.9e-31 139.4 136 52.2
SGA_v2.0_scaffold5G03029 Striga asiatica HOM05D004435 ORTHO05D005103 3.6e-26 122.5 96 62.5
Actinidia20096 Actinidia chinensis HOM05D004435 ORTHO05D005103 1.3e-23 114.0 119 52.1
Ca_26677_v3 Cicer arietinum L. HOM05D004435 ORTHO05D005103 1.1e-22 110.9 67 76.1
CBR_g19326 Chara braunii HOM05D004435 ORTHO05D005103 1.1e-19 100.9 127 38.6
Cpa.g.sc96.43 Carica papaya HOM05D004435 ORTHO05D005103 4.3e-11 72.4 58 60.3
FAN01G0536 Fragaria x ananassa HOM05D004435 ORTHO05D005103 4.8e-10 68.9 45 68.9
Peaxi162Scf00345g00113 Petunia axillaris HOM05D002646 ORTHO05D002782 7.1e-06 55.1 41 68.3


User provided reference genes

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