Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01979 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 1.1e-200 703.4 443 100.0
Mapoly0001s0121 Marchantia polymorpha HOM05D005514 ORTHO05D006563 5.3e-57 226.1 405 43.7
Thecc.09G107100 Theobroma cacao HOM05D005514 ORTHO05D006563 1.0e-55 221.9 482 39.8
Sabra06G0124000 Salix brachista HOM05D005514 ORTHO05D006563 6.5e-55 219.2 476 38.9
MD02G1042900 Malus domestica HOM05D005514 ORTHO05D006563 1.6e-53 214.5 478 38.5
AUR62010955 Chenopodium quinoa HOM05D005514 ORTHO05D006563 3.6e-53 213.4 461 39.0
ATR0315G038 Amborella trichopoda HOM05D005514 ORTHO05D006563 3.0e-52 210.3 299 47.8
Hma1.2p1_1151F.1_g261950 Hydrangea macrophylla HOM05D005514 ORTHO05D006563 2.6e-51 207.2 461 40.3
Manes.03G023100 Manihot esculenta HOM05D005514 ORTHO05D006563 2.6e-51 207.2 304 46.7
SEGI_18875 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 3.3e-51 206.8 294 45.9
Duzib168G0165 Durio zibethinus HOM05D005514 ORTHO05D006563 4.4e-51 206.5 432 38.4
Oeu002248.1 Olea europaea HOM05D005514 ORTHO05D006563 9.7e-51 205.3 464 37.1
Cc06_g09930 Coffea canephora HOM05D005514 ORTHO05D006563 2.2e-50 204.1 292 47.3
QL02p045925 Quercus lobata HOM05D005514 ORTHO05D006563 3.7e-50 203.4 472 37.1
MBI04_g19180_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 8.2e-50 202.2 312 47.8
EL10Ac8g18440 Beta vulgaris HOM05D005514 ORTHO05D006563 3.1e-49 200.3 460 37.4
Cfa003235 Carpinus fangiana HOM05D005514 ORTHO05D006563 4.1e-49 199.9 306 48.0
CiPaw.04G162600 Carya illinoinensis HOM05D005514 ORTHO05D006563 4.1e-49 199.9 460 37.4
Nn2g11677 Nelumbo nucifera HOM05D005514 ORTHO05D006563 4.1e-49 199.9 302 48.0
CSS0000167 Camellia sinensis var. sinensis HOM05D005514 ORTHO05D006563 5.3e-49 199.5 286 48.3
Dinv41624 Davidia involucrata HOM05D005514 ORTHO05D006563 1.2e-48 198.4 299 46.5
MBI14_g08031_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 1.5e-48 198.0 310 46.8
Pp3c14_23580 Physcomitrium patens HOM05D005514 ORTHO05D006563 3.5e-48 196.8 298 47.0
Eucgr.C01267 Eucalyptus grandis HOM05D005514 ORTHO05D006563 1.3e-47 194.9 297 47.1
TAR383G0343 Trochodendron aralioides HOM05D001777 ORTHO05D001809 2.9e-47 193.7 455 38.0
CANSAT02G0006 Cannabis sativa HOM05D005514 ORTHO05D006563 3.8e-47 193.4 451 36.8
vmacro06229 Vaccinium macrocarpon HOM05D005514 ORTHO05D006563 3.8e-47 193.4 303 45.2
Atru.chr7.1371 Acer truncatum HOM05D005514 ORTHO05D006563 6.5e-47 192.6 490 36.9
Prupe.7G234000 Prunus persica HOM05D005514 ORTHO05D006563 2.5e-46 190.7 302 45.0
Actinidia32673 Actinidia chinensis HOM05D005514 ORTHO05D006563 3.2e-46 190.3 423 39.7
Dinv36656 Davidia involucrata HOM05D005514 ORTHO05D006563 5.5e-46 189.5 305 43.6
Peaxi162Scf00031g00232 Petunia axillaris HOM05D005514 ORTHO05D006563 9.4e-46 188.7 294 43.5
CiPaw.03G229100 Carya illinoinensis HOM05D005514 ORTHO05D006563 1.4e-44 184.9 306 44.1
FAN23G0542 Fragaria x ananassa HOM05D005514 ORTHO05D006563 1.8e-44 184.5 315 45.1
AUR62021464 Chenopodium quinoa HOM05D005514 ORTHO05D006563 2.3e-44 184.1 460 36.3
Ca_25539_v3 Cicer arietinum L. HOM05D005514 ORTHO05D006563 2.3e-44 184.1 309 45.3
RcHm_v2.0_Chr2g0089981 Rosa chinensis HOM05D005514 ORTHO05D006563 4.0e-44 183.3 312 44.9
FvH4_1g04330 Fragaria vesca HOM05D005514 ORTHO05D006563 5.2e-44 183.0 307 45.3
Gohir.D08G262600 Gossypium hirsutum HOM05D005514 ORTHO05D006563 1.1e-43 181.8 315 44.8
CAN.G148.5 Capsicum annuum HOM05D005514 ORTHO05D006563 2.0e-43 181.0 443 35.9
Duzib150G0489 Durio zibethinus HOM05D005514 ORTHO05D006563 2.6e-43 180.6 267 47.2
Nitab4.5_0000010g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 2.6e-43 180.6 457 36.3
FAN26G2817 Fragaria x ananassa HOM05D005514 ORTHO05D006563 3.3e-43 180.3 437 36.6
Ciclev10008655m.g Citrus clementina HOM05D005514 ORTHO05D006563 5.7e-43 179.5 485 35.9
Phvul.004G165700 Phaseolus vulgaris HOM05D005514 ORTHO05D006563 5.7e-43 179.5 304 44.7
arahy.Tifrunner.gnm1.ann1.LW2ZPS Arachis hypogaea HOM05D005514 ORTHO05D006563 7.4e-43 179.1 294 44.2
Gorai.004G280600 Gossypium raimondii HOM05D005514 ORTHO05D006563 9.7e-43 178.7 317 43.8
PSO782G4531 Papaver somniferum HOM05D005514 ORTHO05D006563 1.7e-42 177.9 324 42.6
Nitab4.5_0000952g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 2.2e-42 177.6 459 35.5
arahy.Tifrunner.gnm1.ann1.7WD3SA Arachis hypogaea HOM05D005514 ORTHO05D006563 3.7e-42 176.8 294 43.9
PSO566G0157 Papaver somniferum HOM05D005514 ORTHO05D006563 6.3e-42 176.0 319 43.6
VMungo0464G0467 Vigna mungo HOM05D005514 ORTHO05D006563 1.4e-41 174.9 305 45.6
FAN19G0406 Fragaria x ananassa HOM05D005514 ORTHO05D006563 1.8e-41 174.5 436 36.2
Cpa.g.sc23.79 Carica papaya HOM05D005514 ORTHO05D006563 4.1e-41 173.3 264 45.5
Hund09218 Selenicereus undatus HOM05D005514 ORTHO05D006563 4.1e-41 173.3 470 36.8
MD15G1181700 Malus domestica HOM05D005514 ORTHO05D006563 7.0e-41 172.6 300 45.3
Gohir.A08G241800 Gossypium hirsutum HOM05D005514 ORTHO05D006563 1.6e-40 171.4 318 43.1
Glyma.09G192400 Glycine max HOM05D005514 ORTHO05D006563 3.5e-40 170.2 304 44.1
TAR624G0612 Trochodendron aralioides HOM05D005514 ORTHO05D006563 5.9e-40 169.5 265 46.0
CsaV3_1G045730 Cucumis sativus L. HOM05D005514 ORTHO05D006563 7.7e-40 169.1 311 41.8
HanXRQChr10g0318661 Helianthus annuus HOM05D005514 ORTHO05D006563 2.2e-39 167.5 450 36.4
ClCG06G008760 Citrullus lanatus HOM05D005514 ORTHO05D006563 5.0e-39 166.4 311 41.2
Oeu064593.1 Olea europaea HOM05D005514 ORTHO05D006563 5.0e-39 166.4 321 39.9
Aqoxy7G01583 Aquilegia oxysepala HOM05D005514 ORTHO05D006563 6.5e-39 166.0 280 43.9
MELO3C024688.2 Cucumis melo HOM05D005514 ORTHO05D006563 8.5e-39 165.6 312 41.3
Ah.07g205470 Amaranthus hybridus HOM05D005514 ORTHO05D006563 1.1e-38 165.2 454 36.3
Actinidia07405 Actinidia chinensis HOM05D005514 ORTHO05D006563 4.2e-38 163.3 302 42.4
Potri.006G160500 Populus trichocarpa HOM05D005514 ORTHO05D006563 4.7e-37 159.8 261 42.5
Lalb_Chr24g0397401 Lupinus albus HOM05D005514 ORTHO05D006563 6.1e-37 159.5 298 43.0
Solyc05g018340.4 Solanum lycopersicum HOM05D005514 ORTHO05D006563 6.1e-37 159.5 446 34.8
Sopen05g015140 Solanum pennellii HOM05D005514 ORTHO05D006563 6.1e-37 159.5 446 34.8
MSTRG.10624 Avicennia marina HOM05D005514 ORTHO05D006563 1.0e-36 158.7 459 36.4
Medtr6g087890 Medicago truncatula HOM05D005514 ORTHO05D006563 1.4e-36 158.3 461 35.8
Potri.018G083100 Populus trichocarpa HOM05D005514 ORTHO05D006563 1.8e-36 157.9 295 41.0
Sc18g0001310 Simmondsia chinensis HOM05D005514 ORTHO05D006563 5.2e-36 156.4 464 35.3
Glyma.07G084500 Glycine max HOM05D005514 ORTHO05D006563 6.8e-36 156.0 307 41.4
ECA234G0189 Erigeron canadensis HOM05D005514 ORTHO05D006563 1.5e-35 154.8 314 38.9
Psat1g044240 Pisum sativum HOM05D005514 ORTHO05D006563 2.0e-35 154.5 322 40.7
Haze_25771 Corylus avellana HOM05D005514 ORTHO05D006563 2.6e-35 154.1 258 44.6
Lalb_Chr22g0352701 Lupinus albus HOM05D005514 ORTHO05D006563 3.4e-35 153.7 296 42.9
Lj2g0026530 Lotus japonicus HOM05D005514 ORTHO05D006563 2.8e-34 150.6 355 38.9
PGR142G2557 Punica granatum HOM05D005514 ORTHO05D006563 5.4e-33 146.4 295 41.0
PGSC0003DMG400027426 Solanum tuberosum HOM05D005514 ORTHO05D006563 7.0e-33 146.0 283 40.3
COL.COLO4_34823 Corchorus olitorius HOM05D005514 ORTHO05D006563 9.1e-33 145.6 295 39.3
CDE05G1480 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 1.2e-32 145.2 279 45.5
TPR.G10049 Trifolium pratense HOM05D005514 ORTHO05D006563 1.6e-32 144.8 488 32.2
Lalb_Chr14g0371621 Lupinus albus HOM05D005514 ORTHO05D006563 9.4e-30 135.6 301 40.5
Sed0015833 Sechium edule HOM05D005514 ORTHO05D006563 2.1e-29 134.4 307 37.5
Sed0026603 Sechium edule HOM05D005514 ORTHO05D006563 1.8e-28 131.3 374 34.5
THA.LOC104804022 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 3.0e-28 130.6 291 39.5
CDE05G2615 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 2.0e-27 127.9 276 42.0
TWI23G1143 Tripterygium wilfordii HOM05D005514 ORTHO05D006563 2.6e-27 127.5 276 39.9
Migut.K00501 Erythranthe guttata HOM05D005514 ORTHO05D006563 9.8e-27 125.6 433 32.6
GSVIVG01015362001 Vitis vinifera HOM05D005514 ORTHO05D006563 9.8e-27 125.6 159 51.6
DCAR_028696 Daucus carota HOM05D005514 ORTHO05D006563 1.3e-26 125.2 484 30.6
MSTRG.26360 Avicennia marina HOM05D005514 ORTHO05D006563 1.7e-26 124.8 296 37.5
Lj7A655G38 Lonicera japonica HOM05D005514 ORTHO05D006563 3.7e-26 123.6 130 53.1
Zm00001eb147430 Zea mays HOM05D005514 ORTHO05D006563 3.7e-26 123.6 274 37.6
Nn3g18098 Nelumbo nucifera HOM05D005514 ORTHO05D006563 6.3e-26 122.9 94 68.1
Os06g0332900 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 1.0e-23 115.5 291 38.5
Sabra18G0070900 Salix brachista HOM05D005514 ORTHO05D006563 5.0e-23 113.2 218 37.2
AagrBONN_evm.TU.Sc2ySwM_344.197 Anthoceros agrestis HOM05D005514 ORTHO05D006563 8.6e-23 112.5 146 50.7
Aa31LG8G17060 Aethionema arabicum HOM05D005514 ORTHO05D006563 1.5e-22 111.7 309 36.9
Rhsim03G0240000 Rhododendron simsii HOM05D005514 ORTHO05D006563 1.9e-22 111.3 233 40.3
THA.LOC104820053 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 8.0e-21 105.9 298 36.2
BcaNung00443 Brassica carinata HOM05D005514 ORTHO05D006563 1.8e-20 104.8 296 36.1
SMO169G0168 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 1.8e-20 104.8 124 52.4
Os02g0274700 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 4.0e-20 103.6 278 35.3
CARHR236720 Cardamine hirsuta HOM05D005514 ORTHO05D006563 2.0e-19 101.3 304 35.5
Carub.0007s1165 Capsella rubella HOM05D005514 ORTHO05D006563 9.8e-19 99.0 320 39.7
Thhalv10025603m.g Eutrema salsugineum HOM05D005514 ORTHO05D006563 2.9e-18 97.4 314 35.7
Lsat_1_v5_gn_5_102941 Lactuca sativa HOM05D005514 ORTHO05D006563 3.7e-18 97.1 242 34.7
AL7G23470 Arabidopsis lyrata HOM05D005514 ORTHO05D006563 1.4e-17 95.1 317 36.3
CBR_g44542 Chara braunii HOM05D005514 ORTHO05D006563 2.4e-17 94.4 244 37.3
Sp7g26930 Schrenkiella parvula HOM05D005514 ORTHO05D006563 2.4e-17 94.4 312 35.3
BolC1t01016H Brassica oleracea HOM05D001777 ORTHO05D006510 5.4e-17 93.2 285 34.4
AT4G28990 Arabidopsis thaliana HOM05D005514 ORTHO05D006563 1.2e-16 92.0 312 36.2
BcaNung01339 Brassica carinata HOM05D005514 ORTHO05D006563 1.2e-16 92.0 314 35.4
SMO116G0230 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 2.0e-16 91.3 45 80.0
BcaC09g51675 Brassica carinata HOM05D005514 ORTHO05D006563 2.7e-16 90.9 136 44.9
C01p10530 Brassica napus HOM05D001777 ORTHO05D006510 1.3e-15 88.6 286 34.3
HPP92_000517 Vanilla planifolia HOM05D005514 ORTHO05D006563 3.0e-15 87.4 274 34.7
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 1.4e-12 78.6 302 33.8
BolC7t46134H Brassica oleracea HOM05D005514 ORTHO05D006563 4.0e-12 77.0 146 40.4
SGA_v2.0_scaffold92G28280 Striga asiatica HOM05D005514 ORTHO05D006563 1.2e-11 75.5 164 37.8
BcaNung00440 Brassica carinata HOM05D005514 ORTHO05D006563 4.9e-10 70.1 265 34.3
SEGI_26024 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 1.1e-09 68.9 85 40.0
BraA03t14917Z Brassica rapa HOM05D005514 ORTHO05D006563 9.2e-09 65.9 278 32.7
BcaNung02893 Brassica carinata HOM05D005514 ORTHO05D006563 1.3e-07 62.0 291 33.7
C07p56560 Brassica napus HOM05D005514 ORTHO05D006563 1.3e-07 62.0 291 33.7
Gohir.D03G142100 Gossypium hirsutum HOM05D002034 ORTHO05D006399 2.5e-06 57.8 47 51.1
Gorai.003G149100 Gossypium raimondii HOM05D002034 ORTHO05D006399 2.5e-06 57.8 47 51.1
Sc21g0005190 Simmondsia chinensis HOM05D002034 ORTHO05D006399 3.3e-06 57.4 49 57.1
Gohir.A03G026400 Gossypium hirsutum HOM05D002034 ORTHO05D006399 7.3e-06 56.2 46 50.0
SEGI_19079 Sequoiadendron giganteum HOM05D002034 ORTHO05D006399 9.5e-06 55.8 39 51.3


User provided reference genes

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