Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 1.1e-104 383.3 183 100.0
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 1.2e-47 193.7 145 62.8
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 7.8e-47 191.0 134 62.7
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 1.0e-46 190.7 168 53.0
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 3.9e-46 188.7 155 56.1
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 5.1e-46 188.3 168 52.4
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 6.6e-46 188.0 139 61.2
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 8.7e-46 187.6 139 62.6
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 1.1e-45 187.2 129 62.8
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.1e-45 187.2 113 69.0
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 1.5e-45 186.8 139 58.3
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 1.5e-45 186.8 145 57.9
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 1.9e-45 186.4 183 49.2
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 2.5e-45 186.0 164 56.1
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 4.3e-45 185.3 113 68.1
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 5.6e-45 184.9 159 53.5
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 7.3e-45 184.5 163 55.2
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 9.6e-45 184.1 144 56.9
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 9.6e-45 184.1 140 57.9
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 9.6e-45 184.1 134 59.7
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 9.6e-45 184.1 137 59.9
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 2.1e-44 183.0 134 60.4
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 3.6e-44 182.2 144 59.7
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 3.6e-44 182.2 128 64.1
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 6.2e-44 181.4 156 57.7
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 8.1e-44 181.0 119 63.9
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 8.1e-44 181.0 154 55.8
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 8.1e-44 181.0 163 55.2
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 8.1e-44 181.0 163 55.2
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 8.1e-44 181.0 149 56.4
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 1.1e-43 180.6 160 53.1
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 1.4e-43 180.3 139 58.3
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 1.8e-43 179.9 113 66.4
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 2.4e-43 179.5 165 52.1
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 2.4e-43 179.5 155 53.5
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 3.1e-43 179.1 116 66.4
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 3.1e-43 179.1 113 66.4
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 4.0e-43 178.7 143 54.5
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 5.2e-43 178.3 130 61.5
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 5.2e-43 178.3 134 59.0
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 5.2e-43 178.3 126 62.7
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 5.2e-43 178.3 161 55.3
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 5.2e-43 178.3 147 53.7
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 5.2e-43 178.3 152 53.9
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 6.9e-43 177.9 166 52.4
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 6.9e-43 177.9 140 55.0
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 9.0e-43 177.6 161 52.2
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 9.0e-43 177.6 128 62.5
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 1.2e-42 177.2 169 50.3
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 1.5e-42 176.8 134 58.2
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 2.0e-42 176.4 166 51.8
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 2.0e-42 176.4 146 57.5
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 2.0e-42 176.4 161 54.7
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 2.6e-42 176.0 164 52.4
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 2.6e-42 176.0 136 56.6
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 2.6e-42 176.0 163 52.8
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 3.4e-42 175.6 163 52.8
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 3.4e-42 175.6 164 52.4
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 3.4e-42 175.6 160 52.5
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 3.4e-42 175.6 153 53.6
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 4.4e-42 175.3 140 56.4
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 4.4e-42 175.3 147 54.4
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 5.8e-42 174.9 143 53.8
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 7.6e-42 174.5 163 50.9
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 9.9e-42 174.1 162 51.2
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 1.3e-41 173.7 134 59.0
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 1.1e-40 170.6 131 58.8
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 3.2e-40 169.1 130 61.5
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 4.2e-40 168.7 165 48.5
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 5.4e-40 168.3 160 52.5
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 7.1e-40 167.9 127 56.7
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 7.1e-40 167.9 127 58.3
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 2.1e-39 166.4 157 49.7
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 2.1e-39 166.4 169 49.1
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 1.0e-38 164.1 141 51.8
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 5.1e-38 161.8 156 49.4
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 6.6e-38 161.4 113 55.8
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 1.1e-37 160.6 115 59.1
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 1.9e-37 159.8 140 52.9
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 3.1e-35 152.5 117 56.4
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 6.9e-35 151.4 140 52.1
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 6.9e-35 151.4 118 59.3
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 9.0e-35 151.0 136 50.7
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 2.6e-34 149.4 118 58.5
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 3.8e-33 145.6 137 49.6
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 1.9e-32 143.3 115 54.8
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 3.5e-31 139.0 115 53.9
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 7.9e-31 137.9 109 51.4
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 6.7e-30 134.8 87 64.4
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 8.7e-30 134.4 128 52.3
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 1.1e-29 134.0 63 100.0
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 3.3e-29 132.5 136 49.3
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 1.3e-28 130.6 161 44.7
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 1.8e-27 126.7 136 48.5
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 1.3e-25 120.6 80 63.8
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 2.4e-24 116.3 89 58.4
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 7.6e-18 94.7 85 45.9
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 4.2e-08 62.4 77 41.6
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 5.1e-06 55.5 59 44.1
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 5.1e-06 55.5 53 49.1


User provided reference genes

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