Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 2.5e-132 475.3 220 100.0
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 6.5e-56 221.5 165 62.4
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.4e-55 220.3 164 62.2
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 3.2e-55 219.2 165 61.8
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 9.4e-55 217.6 164 57.9
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 1.6e-54 216.9 163 60.7
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 4.7e-54 215.3 164 58.5
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 7.9e-54 214.5 164 58.5
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 1.4e-53 213.8 167 56.3
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 1.8e-53 213.4 161 56.5
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 2.3e-53 213.0 164 58.5
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 2.3e-53 213.0 164 58.5
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 3.9e-53 212.2 158 59.5
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 5.2e-53 211.8 161 56.5
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 5.2e-53 211.8 185 55.1
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 8.8e-53 211.1 167 56.9
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 2.0e-52 209.9 164 56.7
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 3.3e-52 209.1 164 56.1
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 7.4e-52 208.0 159 57.9
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 7.4e-52 208.0 164 53.7
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 7.4e-52 208.0 164 56.1
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 9.7e-52 207.6 166 55.4
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 9.7e-52 207.6 158 57.0
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 1.3e-51 207.2 158 57.0
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 1.7e-51 206.8 163 54.0
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 2.2e-51 206.5 165 56.4
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 3.7e-51 205.7 166 55.4
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 4.8e-51 205.3 157 58.0
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 4.8e-51 205.3 165 57.6
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 6.3e-51 204.9 198 49.0
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 6.3e-51 204.9 161 55.3
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 1.1e-50 204.1 165 57.0
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 1.4e-50 203.8 163 56.4
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 3.1e-50 202.6 161 55.9
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 5.3e-50 201.8 160 56.2
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 7.0e-50 201.4 157 58.0
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 7.0e-50 201.4 157 57.3
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 9.1e-50 201.1 158 55.7
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 2.6e-49 199.5 164 54.3
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 2.6e-49 199.5 161 54.7
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 7.7e-49 198.0 158 55.1
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 7.7e-49 198.0 139 64.0
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 1.0e-48 197.6 168 51.2
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 1.7e-48 196.8 158 55.1
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 1.7e-48 196.8 164 53.7
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 2.2e-48 196.4 159 55.3
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 2.2e-48 196.4 161 52.8
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 2.9e-48 196.1 158 55.1
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 3.8e-48 195.7 158 55.1
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 6.5e-48 194.9 168 51.2
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 6.5e-48 194.9 168 51.2
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 6.5e-48 194.9 165 55.2
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 6.5e-48 194.9 158 55.7
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 8.5e-48 194.5 159 55.3
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 8.5e-48 194.5 161 54.7
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 1.5e-47 193.7 164 55.5
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 2.5e-47 193.0 157 54.1
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 4.2e-47 192.2 166 55.4
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 9.4e-47 191.0 161 52.2
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 9.4e-47 191.0 167 52.1
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 2.1e-46 189.9 158 53.2
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 3.6e-46 189.1 161 52.8
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 4.7e-46 188.7 155 54.2
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 4.7e-46 188.7 164 54.3
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 1.0e-45 187.6 159 54.1
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 1.8e-45 186.8 161 52.8
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 2.3e-45 186.4 163 52.8
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 2.3e-45 186.4 157 52.9
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 4.0e-45 185.7 159 55.3
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 5.2e-45 185.3 199 48.2
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 5.2e-45 185.3 159 52.2
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 6.7e-45 184.9 163 52.1
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 6.7e-45 184.9 161 52.8
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 8.8e-45 184.5 162 53.1
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 1.2e-44 184.1 159 53.5
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 1.2e-44 184.1 171 52.6
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 4.4e-44 182.2 163 51.5
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 4.4e-44 182.2 159 52.2
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 4.4e-44 182.2 161 52.2
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 4.4e-44 182.2 159 51.6
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 7.5e-44 181.4 161 50.3
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 9.7e-44 181.0 159 52.8
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 2.2e-43 179.9 163 50.9
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 2.8e-43 179.5 155 52.9
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 8.2e-43 177.9 155 52.3
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 4.1e-42 175.6 145 53.1
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 2.0e-41 173.3 158 50.0
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 2.7e-41 172.9 158 50.0
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 1.7e-40 170.2 146 56.8
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.7e-40 170.2 176 47.7
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 2.9e-40 169.5 164 48.8
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 1.1e-39 167.5 142 54.2
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 1.1e-39 167.5 138 54.3
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 1.9e-39 166.8 168 47.0
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 7.2e-39 164.9 165 46.7
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 7.2e-39 164.9 159 49.1
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 9.4e-39 164.5 142 53.5
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 1.2e-38 164.1 165 46.1
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 2.3e-37 159.8 159 46.5
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 2.0e-36 156.8 163 46.0
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 7.5e-36 154.8 126 53.2
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 9.8e-36 154.5 166 45.2
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 1.1e-34 151.0 162 45.1
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 1.2e-33 147.5 125 52.8
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 1.2e-33 147.5 154 46.1
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 2.2e-32 143.3 169 42.0
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 2.9e-32 142.9 165 44.8
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 5.0e-32 142.1 166 43.4
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 9.5e-31 137.9 113 52.2
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 2.8e-30 136.3 170 42.9
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 1.2e-28 131.0 155 41.3
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 8.0e-22 108.2 130 43.8
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 1.4e-18 97.4 103 44.7
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.8e-18 97.1 163 33.7
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 4.1e-18 95.9 53 75.5
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 6.6e-16 88.6 85 47.1
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 3.3e-15 86.3 79 49.4
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 2.8e-14 83.2 154 32.5
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 3.5e-09 66.2 54 51.9
Gohir.A05G166400 Gossypium hirsutum HOM05D000543 ORTHO05D000396 2.8e-06 56.6 149 26.2
CAN.G424.30 Capsicum annuum HOM05D000543 ORTHO05D000396 3.6e-06 56.2 108 32.4


User provided reference genes

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