Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01875 Sequoiadendron giganteum HOM05D003422 ORTHO05D004263 1.0e-81 306.6 146 100.0
SEGI_07600 Sequoiadendron giganteum HOM05D003422 ORTHO05D004263 2.0e-69 265.8 129 98.4
ATR0824G091 Amborella trichopoda HOM05D003422 ORTHO05D004263 3.5e-66 255.0 129 94.6
Nn2g13933 Nelumbo nucifera HOM05D003422 ORTHO05D004263 6.4e-60 234.2 128 85.9
Nn8g40815 Nelumbo nucifera HOM05D003422 ORTHO05D004263 6.4e-60 234.2 128 85.9
Cc11_g15770 Coffea canephora HOM05D003422 ORTHO05D004263 1.4e-59 233.0 128 85.2
TWI39G0719 Tripterygium wilfordii HOM05D003422 ORTHO05D004263 2.4e-59 232.3 128 85.2
Rhsim02G0001300 Rhododendron simsii HOM05D003422 ORTHO05D004263 3.2e-59 231.9 131 83.2
Sabra12G0061400 Salix brachista HOM05D003422 ORTHO05D004263 4.2e-59 231.5 133 81.2
Cfa009213 Carpinus fangiana HOM05D003422 ORTHO05D004263 5.4e-59 231.1 128 84.4
Cfa012129 Carpinus fangiana HOM05D003422 ORTHO05D004263 5.4e-59 231.1 128 84.4
Haze_08919 Corylus avellana HOM05D003422 ORTHO05D004263 5.4e-59 231.1 128 84.4
Haze_12250 Corylus avellana HOM05D003422 ORTHO05D004263 5.4e-59 231.1 128 84.4
Actinidia15098 Actinidia chinensis HOM05D003422 ORTHO05D004263 7.1e-59 230.7 128 84.4
Nn8g39875 Nelumbo nucifera HOM05D003422 ORTHO05D004263 7.1e-59 230.7 128 85.2
CiPaw.05G181800 Carya illinoinensis HOM05D003422 ORTHO05D004263 9.3e-59 230.3 128 83.6
FvH4_4g25580 Fragaria vesca HOM05D003422 ORTHO05D004263 1.2e-58 229.9 128 83.6
CiPaw.05G159400 Carya illinoinensis HOM05D003422 ORTHO05D004263 2.1e-58 229.2 128 82.8
Hma1.2p1_3343F.1_g335440 Hydrangea macrophylla HOM05D003422 ORTHO05D004263 2.1e-58 229.2 128 83.6
Mapoly0061s0104 Marchantia polymorpha HOM05D003422 ORTHO05D004263 2.1e-58 229.2 129 83.7
CSS0036067 Camellia sinensis var. sinensis HOM05D003422 ORTHO05D004263 2.7e-58 228.8 128 82.8
CAN.G158.25 Capsicum annuum HOM05D003422 ORTHO05D004263 2.7e-58 228.8 128 83.6
CBR_g32274 Chara braunii HOM05D003422 ORTHO05D004263 2.7e-58 228.8 129 82.2
FAN07G0682 Fragaria x ananassa HOM05D003422 ORTHO05D004263 2.7e-58 228.8 128 83.6
FAN17G2514 Fragaria x ananassa HOM05D003422 ORTHO05D004263 2.7e-58 228.8 128 83.6
QL03p058012 Quercus lobata HOM05D003422 ORTHO05D004263 2.7e-58 228.8 128 83.6
Sc14g0008740 Simmondsia chinensis HOM05D003422 ORTHO05D004263 2.7e-58 228.8 128 83.6
Solyc01g005810.3 Solanum lycopersicum HOM05D003422 ORTHO05D004263 2.7e-58 228.8 128 84.4
Sopen01g001810 Solanum pennellii HOM05D003422 ORTHO05D004263 2.7e-58 228.8 128 84.4
PGSC0003DMG400032131 Solanum tuberosum HOM05D003422 ORTHO05D004263 2.7e-58 228.8 128 84.4
unitig_21.g20608 Utricularia gibba HOM05D003422 ORTHO05D004263 2.7e-58 228.8 128 84.4
Rhsim06G0078600 Rhododendron simsii HOM05D003422 ORTHO05D004263 3.5e-58 228.4 131 80.9
RcHm_v2.0_Chr4g0433011 Rosa chinensis HOM05D003422 ORTHO05D004263 3.5e-58 228.4 128 83.6
Atru.chr2.1587 Acer truncatum HOM05D003422 ORTHO05D004263 4.6e-58 228.0 128 82.8
Atru.chr3.1581 Acer truncatum HOM05D003422 ORTHO05D004263 4.6e-58 228.0 128 82.8
Potri.012G085300 Populus trichocarpa HOM05D003422 ORTHO05D004263 4.6e-58 228.0 128 83.6
Sabra15G0107000 Salix brachista HOM05D003422 ORTHO05D004263 6.0e-58 227.6 128 82.8
Dinv15231 Davidia involucrata HOM05D003422 ORTHO05D004263 7.9e-58 227.3 128 83.6
FAN22G1899 Fragaria x ananassa HOM05D003422 ORTHO05D004263 7.9e-58 227.3 128 82.8
MD03G1198200 Malus domestica HOM05D003422 ORTHO05D004263 7.9e-58 227.3 128 82.8
Nitab4.5_0009109g0040 Nicotiana tabacum HOM05D003422 ORTHO05D004263 7.9e-58 227.3 128 83.6
Nitab4.5_0016963g0010 Nicotiana tabacum HOM05D003422 ORTHO05D004263 7.9e-58 227.3 128 83.6
Oeu041425.1 Olea europaea HOM05D003422 ORTHO05D004263 7.9e-58 227.3 128 83.6
Peaxi162Scf00128g00219 Petunia axillaris HOM05D003422 ORTHO05D004263 7.9e-58 227.3 128 83.6
Rhsim12G0110100 Rhododendron simsii HOM05D003422 ORTHO05D004263 7.9e-58 227.3 131 80.9
Ciclev10032237m.g Citrus clementina HOM05D003422 ORTHO05D004263 1.0e-57 226.9 128 82.8
Lalb_Chr10g0099861 Lupinus albus HOM05D003422 ORTHO05D004263 1.0e-57 226.9 128 84.4
Potri.015G083700 Populus trichocarpa HOM05D003422 ORTHO05D004263 1.0e-57 226.9 128 82.8
CANSAT64G0467 Cannabis sativa HOM05D003422 ORTHO05D004263 1.3e-57 226.5 128 82.8
arahy.Tifrunner.gnm1.ann1.G4VR7T Arachis hypogaea HOM05D003422 ORTHO05D004263 1.8e-57 226.1 128 83.6
arahy.Tifrunner.gnm1.ann1.I3QT17 Arachis hypogaea HOM05D003422 ORTHO05D004263 1.8e-57 226.1 128 83.6
Dinv38208 Davidia involucrata HOM05D003422 ORTHO05D004263 1.8e-57 226.1 128 82.8
TWI23G0208 Tripterygium wilfordii HOM05D003422 ORTHO05D004263 1.8e-57 226.1 128 82.8
TAR622G0502 Trochodendron aralioides HOM05D003422 ORTHO05D004263 1.8e-57 226.1 128 83.6
Eucgr.B00992 Eucalyptus grandis HOM05D003422 ORTHO05D004263 2.3e-57 225.7 128 83.6
Prupe.1G244800 Prunus persica HOM05D003422 ORTHO05D004263 2.3e-57 225.7 128 82.8
Prupe.8G016700 Prunus persica HOM05D003422 ORTHO05D004263 2.3e-57 225.7 128 82.8
Migut.E00204 Erythranthe guttata HOM05D003422 ORTHO05D004263 3.0e-57 225.3 128 84.4
MD11G1214400 Malus domestica HOM05D003422 ORTHO05D004263 3.0e-57 225.3 128 82.0
Lalb_Chr04g0254851 Lupinus albus HOM05D003422 ORTHO05D004263 3.9e-57 224.9 128 83.6
Nitab4.5_0001565g0060 Nicotiana tabacum HOM05D003422 ORTHO05D004263 3.9e-57 224.9 128 82.8
QL03p061510 Quercus lobata HOM05D003422 ORTHO05D004263 3.9e-57 224.9 128 82.8
THA.LOC104822989 Tarenaya hassleriana HOM05D003422 ORTHO05D004263 3.9e-57 224.9 128 82.8
Manes.13G024200 Manihot esculenta HOM05D003422 ORTHO05D004263 5.1e-57 224.6 128 82.8
Pp3c2_4220 Physcomitrium patens HOM05D003422 ORTHO05D004263 6.7e-57 224.2 128 83.6
Hund06028 Selenicereus undatus HOM05D003422 ORTHO05D004263 6.7e-57 224.2 128 82.8
GSVIVG01007655001 Vitis vinifera HOM05D003422 ORTHO05D004263 6.7e-57 224.2 128 82.0
GSVIVG01021879001 Vitis vinifera HOM05D003422 ORTHO05D004263 6.7e-57 224.2 128 82.0
MELO3C017744.2 Cucumis melo HOM05D003422 ORTHO05D004263 8.7e-57 223.8 128 82.0
Eucgr.K01009 Eucalyptus grandis HOM05D003422 ORTHO05D004263 8.7e-57 223.8 128 82.0
Sed0010066 Sechium edule HOM05D003422 ORTHO05D004263 8.7e-57 223.8 128 82.0
Sed0026406 Sechium edule HOM05D003422 ORTHO05D004263 8.7e-57 223.8 128 82.0
ClCG07G015410 Citrullus lanatus HOM05D003422 ORTHO05D004263 1.1e-56 223.4 128 82.0
Aqoxy5G03760 Aquilegia oxysepala HOM05D003422 ORTHO05D004263 1.5e-56 223.0 128 80.5
Cpa.g.sc33.23 Carica papaya HOM05D003422 ORTHO05D004263 1.5e-56 223.0 128 82.0
CsaV3_4G003000 Cucumis sativus L. HOM05D003422 ORTHO05D004263 1.9e-56 222.6 128 81.2
RcHm_v2.0_Chr7g0190541 Rosa chinensis HOM05D003422 ORTHO05D004263 1.9e-56 222.6 128 82.0
SMO331G0073 Selaginella moellendorffii HOM05D003422 ORTHO05D004263 1.9e-56 222.6 148 73.6
BcaB05g24600 Brassica carinata HOM05D003422 ORTHO05D004263 5.6e-56 221.1 128 82.0
BraA02t06729Z Brassica rapa HOM05D003422 ORTHO05D004263 7.4e-56 220.7 128 82.0
PGR102G0689 Punica granatum HOM05D003422 ORTHO05D004263 9.6e-56 220.3 128 82.0
AT1G23280 Arabidopsis thaliana HOM05D003422 ORTHO05D004263 1.3e-55 219.9 128 81.2
BcaC03g15214 Brassica carinata HOM05D003422 ORTHO05D004263 1.3e-55 219.9 128 82.0
BcaC08g45809 Brassica carinata HOM05D003422 ORTHO05D004263 1.3e-55 219.9 128 81.2
A02p16750 Brassica napus HOM05D003422 ORTHO05D004263 1.3e-55 219.9 128 82.0
A07p31020 Brassica napus HOM05D003422 ORTHO05D004263 1.3e-55 219.9 128 81.2
C02p28010 Brassica napus HOM05D003422 ORTHO05D004263 1.3e-55 219.9 128 82.0
C06p36020 Brassica napus HOM05D003422 ORTHO05D004263 1.3e-55 219.9 128 81.2
BolC2t08844H Brassica oleracea HOM05D003422 ORTHO05D004263 1.3e-55 219.9 128 82.0
BolC6t38723H Brassica oleracea HOM05D003422 ORTHO05D004263 1.3e-55 219.9 128 81.2
COL.COLO4_05559 Corchorus olitorius HOM05D003422 ORTHO05D004263 1.6e-55 219.5 128 81.2
Lsat_1_v5_gn_8_152261 Lactuca sativa HOM05D003422 ORTHO05D004263 1.6e-55 219.5 128 80.5
Sp5g25830 Schrenkiella parvula HOM05D003422 ORTHO05D004263 1.6e-55 219.5 128 80.5
TPR.G28314 Trifolium pratense HOM05D003422 ORTHO05D004263 1.6e-55 219.5 128 80.5
HPP92_014432 Vanilla planifolia HOM05D003422 ORTHO05D004263 1.6e-55 219.5 129 79.1
Gohir.A12G199400 Gossypium hirsutum HOM05D003422 ORTHO05D004263 2.1e-55 219.2 128 81.2
Gohir.D12G202200 Gossypium hirsutum HOM05D003422 ORTHO05D004263 2.1e-55 219.2 128 81.2
Gorai.008G217200 Gossypium raimondii HOM05D003422 ORTHO05D004263 2.1e-55 219.2 128 81.2
BcaB03g15550 Brassica carinata HOM05D003422 ORTHO05D004263 3.7e-55 218.4 128 80.5
HanXRQChr06g0172831 Helianthus annuus HOM05D003422 ORTHO05D004263 3.7e-55 218.4 128 79.7
Phvul.010G035100 Phaseolus vulgaris HOM05D003422 ORTHO05D004263 3.7e-55 218.4 128 80.5
Phvul.011G000100 Phaseolus vulgaris HOM05D003422 ORTHO05D004263 3.7e-55 218.4 128 80.5
CARHR023720 Cardamine hirsuta HOM05D003422 ORTHO05D004263 4.8e-55 218.0 129 79.1
Glyma.12G119800 Glycine max HOM05D003422 ORTHO05D004263 4.8e-55 218.0 128 80.5
TPR.G37166 Trifolium pratense HOM05D003422 ORTHO05D004263 4.8e-55 218.0 128 81.2
PSO478G1628 Papaver somniferum HOM05D003422 ORTHO05D004263 6.2e-55 217.6 128 78.1
VMungo1127G0899 Vigna mungo HOM05D003422 ORTHO05D004263 6.2e-55 217.6 128 80.5
Duzib068G0444 Durio zibethinus HOM05D003422 ORTHO05D004263 8.1e-55 217.2 128 79.7
PSO017G4826 Papaver somniferum HOM05D003422 ORTHO05D004263 8.1e-55 217.2 128 78.1
PSO017G5618 Papaver somniferum HOM05D003422 ORTHO05D004263 8.1e-55 217.2 128 78.1
Thecc.03G025100 Theobroma cacao HOM05D003422 ORTHO05D004263 8.1e-55 217.2 128 80.5
Carub.0001s2287 Capsella rubella HOM05D003422 ORTHO05D004263 1.1e-54 216.9 128 78.9
ECA233G3049 Erigeron canadensis HOM05D003422 ORTHO05D004263 1.1e-54 216.9 128 78.9
FAN06G1621 Fragaria x ananassa HOM05D003422 ORTHO05D004263 1.1e-54 216.9 128 79.7
Aa31LG7G7310 Aethionema arabicum HOM05D003422 ORTHO05D004263 1.4e-54 216.5 128 80.5
Glyma.06G286100 Glycine max HOM05D003422 ORTHO05D004263 1.4e-54 216.5 128 79.7
Lj1g0018398 Lotus japonicus HOM05D003422 ORTHO05D004263 1.4e-54 216.5 128 80.5
DCAR_026512 Daucus carota HOM05D003422 ORTHO05D004263 1.8e-54 216.1 128 78.1
Ca_20120_v3 Cicer arietinum L. HOM05D003422 ORTHO05D004263 2.4e-54 215.7 128 78.9
Thhalv10008312m.g Eutrema salsugineum HOM05D003422 ORTHO05D004263 2.4e-54 215.7 128 78.9
Medtr2g103560 Medicago truncatula HOM05D003422 ORTHO05D004263 9.0e-54 213.8 128 79.7
AL1G31870 Arabidopsis lyrata HOM05D003422 ORTHO05D004263 1.2e-53 213.4 128 78.9
Nitab4.5_0000979g0040 Nicotiana tabacum HOM05D003422 ORTHO05D004263 1.2e-53 213.4 153 69.9
Lsat_1_v5_gn_5_166341 Lactuca sativa HOM05D003422 ORTHO05D004263 2.0e-53 212.6 127 78.0
Psat7g167080 Pisum sativum HOM05D003422 ORTHO05D004263 2.6e-53 212.2 128 78.9
BraA03t13450Z Brassica rapa HOM05D003422 ORTHO05D004263 5.8e-53 211.1 128 77.3
BcaC01g03409 Brassica carinata HOM05D003422 ORTHO05D004263 9.9e-53 210.3 128 77.3
C03p52870 Brassica napus HOM05D003422 ORTHO05D004263 9.9e-53 210.3 128 77.3
BolC3t17554H Brassica oleracea HOM05D003422 ORTHO05D004263 9.9e-53 210.3 128 77.3
CDE05G1364 Ceratophyllum demersum HOM05D003422 ORTHO05D004263 1.7e-52 209.5 130 73.8
Os07g0270900 Oryza sativa ssp. japonica HOM05D003422 ORTHO05D004263 2.2e-52 209.1 126 77.0
TAR374G1409 Trochodendron aralioides HOM05D003422 ORTHO05D004263 2.9e-52 208.8 131 77.1
Zm00001eb364260 Zea mays HOM05D003422 ORTHO05D004263 6.4e-52 207.6 126 75.4
Eucgr.K00985 Eucalyptus grandis HOM05D003422 ORTHO05D004263 3.2e-51 205.3 117 82.9
ATR0996G003 Amborella trichopoda HOM05D003422 ORTHO05D004263 4.2e-51 204.9 109 90.8
vmacro17129 Vaccinium macrocarpon HOM05D003422 ORTHO05D004263 4.2e-51 204.9 107 85.0
AL1G37060 Arabidopsis lyrata HOM05D003422 ORTHO05D004263 7.9e-50 200.7 128 74.2
Cre02.g145231 Chlamydomonas reinhardtii HOM05D003422 ORTHO05D004263 1.3e-49 199.9 128 71.9
PRCOL_00004566 Prasinoderma coloniale HOM05D003422 ORTHO05D004263 2.3e-49 199.1 128 73.4
EL10Ac6g13812 Beta vulgaris HOM05D003422 ORTHO05D004263 5.1e-49 198.0 104 85.6
A03p43080 Brassica napus HOM05D003422 ORTHO05D004263 1.5e-48 196.4 155 63.9
BcaC09g49229 Brassica carinata HOM05D003422 ORTHO05D004263 3.1e-46 188.7 128 69.5
AUR62003555 Chenopodium quinoa HOM05D003422 ORTHO05D004263 3.1e-46 188.7 111 77.5
AUR62017869 Chenopodium quinoa HOM05D003422 ORTHO05D004263 3.1e-46 188.7 111 77.5
A01p32170 Brassica napus HOM05D003422 ORTHO05D004263 2.0e-45 186.0 128 68.8
arahy.Tifrunner.gnm1.ann1.FFB06F Arachis hypogaea HOM05D003422 ORTHO05D004263 3.4e-45 185.3 108 82.4
SGA_v2.0_scaffold63G21735 Striga asiatica HOM05D003637 ORTHO05D004175 7.6e-45 184.1 106 83.0
Atru.chr3.1559 Acer truncatum HOM05D003422 ORTHO05D004263 1.0e-44 183.7 106 81.1
BraA01t03342Z Brassica rapa HOM05D003422 ORTHO05D004263 1.3e-44 183.3 134 65.7
CDE02G2608 Ceratophyllum demersum HOM05D003422 ORTHO05D004263 2.9e-44 182.2 111 76.6
Pp3c1_36430 Physcomitrium patens HOM05D003422 ORTHO05D004263 9.3e-43 177.2 100 81.0
SpUn0343_0020 Schrenkiella parvula HOM05D003422 ORTHO05D004263 6.0e-42 174.5 108 75.9
vmacro16194 Vaccinium macrocarpon HOM05D003422 ORTHO05D004263 5.1e-41 171.4 97 80.4
Actinidia27808 Actinidia chinensis HOM05D003422 ORTHO05D004263 6.7e-41 171.0 131 66.4
Medtr4g079190 Medicago truncatula HOM05D003422 ORTHO05D004263 1.9e-40 169.5 97 79.4
MCO01G280 Micromonas commoda HOM05D003422 ORTHO05D004263 1.9e-40 169.5 125 63.2
FvH4_7g31100 Fragaria vesca HOM05D003422 ORTHO05D004263 9.7e-40 167.2 94 79.8
Cfa026988 Carpinus fangiana HOM05D003422 ORTHO05D004263 3.7e-39 165.2 132 59.1
Haze_26253 Corylus avellana HOM05D003422 ORTHO05D004263 9.4e-35 150.6 129 53.5
Actinidia01349 Actinidia chinensis HOM05D003422 ORTHO05D004263 5.7e-32 141.4 73 84.9
C01p41190 Brassica napus HOM05D003422 ORTHO05D004263 3.0e-25 119.0 71 73.2
BolC1t04073H Brassica oleracea HOM05D003422 ORTHO05D004263 5.1e-25 118.2 71 71.8
SGA_v2.0_scaffold87G27078 Striga asiatica HOM05D003637 ORTHO05D004175 6.7e-25 117.9 70 81.4
Eucgr.K00976 Eucalyptus grandis HOM05D003422 ORTHO05D004263 1.5e-24 116.7 69 75.4
Eucgr.B00881 Eucalyptus grandis HOM05D003422 ORTHO05D004263 1.7e-23 113.2 68 82.4
Prupe.8G011700 Prunus persica HOM05D003422 ORTHO05D004263 3.7e-23 112.1 65 84.6
Os07g0271600 Oryza sativa ssp. japonica HOM05D003422 ORTHO05D004263 1.0e-20 104.0 77 63.6
BolC4t24676H Brassica oleracea HOM05D003422 ORTHO05D004263 4.2e-19 98.6 111 52.3
FAN06G3710 Fragaria x ananassa HOM05D003422 ORTHO05D004263 2.6e-16 89.4 46 82.6
AagrBONN_evm.TU.Sc2ySwM_344.1527 Anthoceros agrestis HOM05D003422 ORTHO05D004263 2.8e-15 85.9 73 58.9
BcaB07g33435 Brassica carinata HOM05D003422 ORTHO05D004263 4.8e-15 85.1 64 68.8
BcaB01g03637 Brassica carinata HOM05D003422 ORTHO05D004263 8.2e-15 84.3 62 74.2
BcaB04g17046 Brassica carinata HOM05D003422 ORTHO05D004263 3.1e-14 82.4 57 73.7
BcaC02g10230 Brassica carinata HOM05D003422 ORTHO05D004263 6.5e-12 74.7 71 57.7
BcaB01g02833 Brassica carinata HOM05D003422 ORTHO05D004263 1.8e-09 66.6 60 61.7
Oeu036040.1 Olea europaea HOM05D003422 ORTHO05D004263 5.7e-08 61.6 131 33.6


User provided reference genes

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