Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 7.2e-98 360.5 176 100.0
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 1.2e-49 200.3 151 63.6
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 1.8e-48 196.4 172 57.0
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 1.8e-48 196.4 170 59.4
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 7.5e-47 191.0 151 62.3
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 7.5e-47 191.0 162 58.6
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 2.9e-46 189.1 174 55.2
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 3.7e-46 188.7 149 63.8
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 4.9e-46 188.3 152 58.6
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 4.9e-46 188.3 155 61.9
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 6.4e-46 188.0 149 61.1
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 8.3e-46 187.6 151 58.3
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 8.3e-46 187.6 174 56.3
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 8.3e-46 187.6 157 55.4
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 8.3e-46 187.6 173 56.1
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 1.4e-45 186.8 160 58.8
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.4e-45 186.8 173 57.2
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 1.4e-45 186.8 149 62.4
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 3.2e-45 185.7 173 52.6
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 4.1e-45 185.3 160 55.0
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 4.1e-45 185.3 173 56.1
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 4.1e-45 185.3 162 58.0
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 4.1e-45 185.3 152 59.9
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 5.4e-45 184.9 161 58.4
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 5.4e-45 184.9 173 55.5
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 9.2e-45 184.1 173 56.1
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 9.2e-45 184.1 161 55.9
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 1.2e-44 183.7 169 55.0
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 1.6e-44 183.3 161 54.7
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 2.0e-44 183.0 172 54.7
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 2.0e-44 183.0 162 56.8
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 2.7e-44 182.6 170 58.2
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 2.7e-44 182.6 172 55.8
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 2.7e-44 182.6 161 55.3
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 3.5e-44 182.2 161 57.8
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 3.5e-44 182.2 172 55.8
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 3.5e-44 182.2 173 52.6
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 3.5e-44 182.2 173 54.9
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 6.0e-44 181.4 173 54.9
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 1.0e-43 180.6 161 55.3
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 1.0e-43 180.6 149 57.0
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 1.3e-43 180.3 162 58.6
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 1.7e-43 179.9 154 56.5
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 2.3e-43 179.5 170 53.5
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 2.3e-43 179.5 180 53.9
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 2.3e-43 179.5 165 55.8
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 2.3e-43 179.5 172 52.9
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 3.0e-43 179.1 175 52.0
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 3.9e-43 178.7 163 55.2
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 5.0e-43 178.3 153 56.9
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 5.0e-43 178.3 163 52.1
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 1.5e-42 176.8 170 51.2
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 1.9e-42 176.4 173 53.2
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 2.5e-42 176.0 164 54.3
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 2.5e-42 176.0 175 54.3
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 3.3e-42 175.6 159 57.9
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 3.3e-42 175.6 161 52.8
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 3.3e-42 175.6 169 51.5
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 4.3e-42 175.3 165 53.3
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 7.3e-42 174.5 164 54.9
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 1.2e-41 173.7 172 51.2
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 1.6e-41 173.3 169 50.9
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 2.1e-41 172.9 148 58.8
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 3.6e-41 172.2 153 55.6
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 8.1e-41 171.0 164 54.3
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 1.1e-40 170.6 207 46.9
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 3.1e-40 169.1 162 54.3
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 4.0e-40 168.7 148 54.7
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 5.2e-40 168.3 152 55.3
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 8.9e-40 167.5 152 53.3
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.0e-39 166.4 148 57.4
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 2.6e-39 166.0 162 51.9
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 9.9e-39 164.1 160 51.2
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 1.7e-38 163.3 166 52.4
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 3.7e-38 162.2 166 50.6
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 6.4e-38 161.4 149 53.0
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 6.4e-38 161.4 149 53.0
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 4.1e-37 158.7 158 53.2
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 4.1e-37 158.7 162 51.2
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 7.1e-37 157.9 165 47.9
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 9.2e-37 157.5 166 48.8
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 1.5e-34 150.2 157 48.4
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 1.9e-34 149.8 212 41.5
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 4.3e-34 148.7 157 52.2
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 8.1e-33 144.4 139 49.6
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 1.4e-32 143.7 183 47.0
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 1.6e-28 130.2 128 53.9
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 3.1e-24 115.9 126 45.2
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 1.3e-22 110.5 138 42.8
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 3.2e-21 105.9 59 76.3
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 3.3e-18 95.9 78 59.0
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 1.1e-16 90.9 103 47.6
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 3.8e-14 82.4 67 53.7
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 1.6e-12 77.0 60 58.3
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 6.0e-12 75.1 113 35.4
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 5.6e-10 68.6 91 44.0
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 5.6e-10 68.6 91 44.0


User provided reference genes

Program Settings