Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 0.0e+00 1351.3 698 100.0
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 2.2e-57 228.0 583 32.9
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 9.3e-56 222.6 590 33.2
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 3.0e-54 217.6 589 33.4
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 1.1e-53 215.7 588 32.3
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 5.6e-53 213.4 587 31.2
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 1.6e-52 211.8 585 31.8
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 4.8e-52 210.3 586 31.4
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 4.8e-52 210.3 589 32.3
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 1.1e-51 209.1 598 31.6
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 1.4e-51 208.8 589 32.3
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 3.1e-51 207.6 588 29.8
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 1.2e-50 205.7 584 31.2
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 1.5e-50 205.3 589 31.7
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 2.0e-50 204.9 582 31.4
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 2.6e-50 204.5 625 31.4
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 2.6e-50 204.5 625 31.4
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 2.6e-50 204.5 590 30.7
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 2.6e-50 204.5 577 31.2
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 2.6e-50 204.5 593 31.2
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 4.5e-50 203.8 589 31.2
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 5.8e-50 203.4 604 30.8
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 7.6e-50 203.0 591 32.1
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 7.6e-50 203.0 582 31.4
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 9.9e-50 202.6 593 31.9
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 1.7e-49 201.8 576 31.8
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 1.7e-49 201.8 594 32.0
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 1.7e-49 201.8 580 30.3
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 3.8e-49 200.7 586 31.2
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 4.9e-49 200.3 589 30.9
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 6.4e-49 199.9 575 29.2
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 6.4e-49 199.9 579 30.6
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 6.4e-49 199.9 579 30.9
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 1.1e-48 199.1 581 31.2
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 1.1e-48 199.1 585 30.8
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 1.4e-48 198.7 579 30.7
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 1.4e-48 198.7 553 30.4
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 1.9e-48 198.4 578 30.6
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 1.9e-48 198.4 574 31.5
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 1.9e-48 198.4 587 30.3
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 2.4e-48 198.0 580 31.2
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 2.4e-48 198.0 581 30.5
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 3.2e-48 197.6 585 30.8
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 3.2e-48 197.6 584 31.3
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 5.4e-48 196.8 594 30.1
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 7.1e-48 196.4 589 32.1
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 1.6e-47 195.3 585 32.8
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 2.7e-47 194.5 582 29.9
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 2.7e-47 194.5 584 29.6
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 2.7e-47 194.5 587 30.5
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 2.7e-47 194.5 586 30.9
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 3.5e-47 194.1 581 31.5
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 4.6e-47 193.7 584 29.8
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 4.6e-47 193.7 591 29.9
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 4.6e-47 193.7 594 30.6
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 4.6e-47 193.7 582 30.1
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 6.0e-47 193.4 579 31.3
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 6.0e-47 193.4 580 31.2
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 7.9e-47 193.0 586 29.9
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 1.0e-46 192.6 580 30.0
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 5.1e-46 190.3 584 29.5
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 1.5e-45 188.7 586 28.8
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 2.5e-45 188.0 584 30.3
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 4.3e-45 187.2 604 29.0
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 7.4e-45 186.4 581 31.5
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 9.6e-45 186.0 586 29.4
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 1.3e-44 185.7 579 29.0
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 1.6e-44 185.3 586 28.8
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 2.1e-44 184.9 566 30.2
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 3.6e-44 184.1 583 29.0
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 4.8e-44 183.7 587 31.0
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 1.1e-43 182.6 588 29.3
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 1.4e-43 182.2 582 28.9
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.8e-43 181.8 582 29.6
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 2.4e-43 181.4 580 29.8
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 2.4e-43 181.4 559 30.9
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 3.1e-43 181.0 557 30.2
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 4.0e-43 180.6 511 31.1
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 4.0e-43 180.6 580 29.3
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 5.3e-43 180.3 583 29.3
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 6.9e-43 179.9 582 28.9
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 6.9e-43 179.9 593 29.7
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 6.9e-43 179.9 597 29.3
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 2.0e-42 178.3 583 28.6
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 3.4e-42 177.6 587 28.8
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 9.9e-42 176.0 581 28.9
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 4.2e-40 170.6 579 29.0
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 7.1e-40 169.9 583 29.7
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 9.3e-40 169.5 589 28.9
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 2.3e-38 164.9 591 28.8
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 2.3e-38 164.9 584 29.5
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 3.9e-38 164.1 503 31.4
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 5.1e-38 163.7 559 29.5
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 8.7e-38 162.9 519 29.3
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 1.6e-36 158.7 572 28.7
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 1.0e-33 149.4 589 29.2
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 2.2e-33 148.3 564 28.2
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 1.9e-32 145.2 660 25.3
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 2.5e-32 144.8 594 28.1
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 3.2e-32 144.4 594 27.6
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 1.0e-30 139.4 615 26.0
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 9.6e-29 132.9 390 29.2
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 2.2e-25 121.7 570 26.8
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 1.1e-24 119.4 550 26.7
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 1.2e-23 115.9 234 31.2
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 9.1e-19 99.8 229 29.3
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 6.5e-17 93.6 511 27.2
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 3.3e-13 81.3 150 33.3


User provided reference genes

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