Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01830 Sequoiadendron giganteum HOM05D006096 ORTHO05D007775 1.1e-68 263.1 128 100.0
Peaxi162Scf00381g01013 Petunia axillaris HOM05D006096 ORTHO05D007775 7.2e-23 110.9 116 48.3
Nitab4.5_0004570g0020 Nicotiana tabacum HOM05D006096 ORTHO05D007775 1.6e-22 109.8 116 47.4
Sc16g0000180 Simmondsia chinensis HOM05D006096 ORTHO05D007775 1.6e-22 109.8 128 47.7
Duzib187G1253 Durio zibethinus HOM05D006096 ORTHO05D007775 6.1e-22 107.8 107 50.5
PSO210G0897 Papaver somniferum HOM05D006096 ORTHO05D007775 6.1e-22 107.8 126 46.8
SGA_v2.0_scaffold111G31503 Striga asiatica HOM05D006096 ORTHO05D007775 6.1e-22 107.8 114 50.0
Glyma.11G241200 Glycine max HOM05D006096 ORTHO05D007775 8.0e-22 107.5 117 48.7
CANSAT01G2346 Cannabis sativa HOM05D006096 ORTHO05D007775 1.0e-21 107.1 115 48.7
PGSC0003DMG400016160 Solanum tuberosum HOM05D006096 ORTHO05D007775 1.0e-21 107.1 114 45.6
Gohir.A10G085100 Gossypium hirsutum HOM05D006096 ORTHO05D007775 1.4e-21 106.7 130 45.4
vmacro18587 Vaccinium macrocarpon HOM05D006096 ORTHO05D007775 1.4e-21 106.7 119 46.2
TAR625G1553 Trochodendron aralioides HOM05D006096 ORTHO05D007775 1.8e-21 106.3 119 47.9
Solyc11g009060.2 Solanum lycopersicum HOM05D006096 ORTHO05D007775 3.0e-21 105.5 117 44.4
Sopen11g004830 Solanum pennellii HOM05D006096 ORTHO05D007775 3.0e-21 105.5 117 44.4
Atru.chr3.1373 Acer truncatum HOM05D006096 ORTHO05D007775 4.0e-21 105.1 127 45.7
Ciclev10026196m.g Citrus clementina HOM05D006096 ORTHO05D007775 5.2e-21 104.8 116 49.1
Glyma.18G015800 Glycine max HOM05D006096 ORTHO05D007775 5.2e-21 104.8 115 47.8
Gohir.D10G103900 Gossypium hirsutum HOM05D006096 ORTHO05D007775 5.2e-21 104.8 128 44.5
Gorai.011G113400 Gossypium raimondii HOM05D006096 ORTHO05D007775 5.2e-21 104.8 128 44.5
Phvul.001G253200 Phaseolus vulgaris HOM05D006096 ORTHO05D007775 6.7e-21 104.4 115 49.6
CARHR202970 Cardamine hirsuta HOM05D006096 ORTHO05D007775 8.8e-21 104.0 114 45.6
CAN.G905.37 Capsicum annuum HOM05D006096 ORTHO05D007775 1.1e-20 103.6 116 46.6
Oeu033049.1 Olea europaea HOM05D006096 ORTHO05D007775 1.1e-20 103.6 115 45.2
Thecc.01G097900 Theobroma cacao HOM05D006096 ORTHO05D007775 1.1e-20 103.6 108 46.3
BcaB08g37116 Brassica carinata HOM05D006096 ORTHO05D007775 1.5e-20 103.2 123 41.5
BcaC04g19315 Brassica carinata HOM05D006096 ORTHO05D007775 1.5e-20 103.2 123 41.5
CSS0046442 Camellia sinensis var. sinensis HOM05D006096 ORTHO05D007775 1.5e-20 103.2 128 45.3
CiPaw.03G143900 Carya illinoinensis HOM05D006096 ORTHO05D007775 1.5e-20 103.2 116 48.3
Cc07_g14840 Coffea canephora HOM05D006096 ORTHO05D007775 2.0e-20 102.8 111 50.5
Medtr3g087010 Medicago truncatula HOM05D006096 ORTHO05D007775 2.0e-20 102.8 115 47.8
Dinv08841 Davidia involucrata HOM05D006096 ORTHO05D007775 2.6e-20 102.4 128 43.8
Psat5g090600 Pisum sativum HOM05D006096 ORTHO05D007775 2.6e-20 102.4 114 44.7
Aa31LG3G16830 Aethionema arabicum HOM05D006096 ORTHO05D007775 3.3e-20 102.1 115 42.6
AUR62001986 Chenopodium quinoa HOM05D006096 ORTHO05D007775 3.3e-20 102.1 116 47.4
VMungo1383G2853 Vigna mungo HOM05D006096 ORTHO05D007775 3.3e-20 102.1 121 47.1
arahy.Tifrunner.gnm1.ann1.DD3ZZY Arachis hypogaea HOM05D006096 ORTHO05D007775 5.7e-20 101.3 116 47.4
DCAR_014211 Daucus carota HOM05D006096 ORTHO05D007775 5.7e-20 101.3 122 44.3
TWI53G1189 Tripterygium wilfordii HOM05D006096 ORTHO05D007775 5.7e-20 101.3 116 47.4
C09p67070 Brassica napus HOM05D006096 ORTHO05D007775 7.4e-20 100.9 116 44.8
Eucgr.H04751 Eucalyptus grandis HOM05D006096 ORTHO05D007775 7.4e-20 100.9 110 46.4
Prupe.6G191000 Prunus persica HOM05D006096 ORTHO05D007775 7.4e-20 100.9 115 47.8
CARHR202980 Cardamine hirsuta HOM05D006096 ORTHO05D007775 9.7e-20 100.5 107 44.9
Lalb_Chr19g0127391 Lupinus albus HOM05D006096 ORTHO05D007775 9.7e-20 100.5 114 46.5
QL06p048506 Quercus lobata HOM05D006096 ORTHO05D007775 1.3e-19 100.1 115 43.5
Cpa.g.sc55.89 Carica papaya HOM05D006096 ORTHO05D007775 1.7e-19 99.8 117 46.2
Thhalv10013818m.g Eutrema salsugineum HOM05D006096 ORTHO05D007775 1.7e-19 99.8 123 41.5
AL6G20820 Arabidopsis lyrata HOM05D006096 ORTHO05D007775 2.2e-19 99.4 123 42.3
BcaC04g19312 Brassica carinata HOM05D006096 ORTHO05D007775 2.2e-19 99.4 116 44.0
BolC9t59480H Brassica oleracea HOM05D006096 ORTHO05D007775 2.2e-19 99.4 116 44.0
Nn1g05418 Nelumbo nucifera HOM05D006096 ORTHO05D007775 2.2e-19 99.4 134 42.5
Aqoxy6G00746 Aquilegia oxysepala HOM05D006096 ORTHO05D007775 2.8e-19 99.0 129 45.0
Carub.0006s0879 Capsella rubella HOM05D006096 ORTHO05D007775 2.8e-19 99.0 124 41.1
Pp3c3_14090 Physcomitrium patens HOM05D006096 ORTHO05D007775 2.8e-19 99.0 114 46.5
TPR.G15994 Trifolium pratense HOM05D006096 ORTHO05D007775 3.7e-19 98.6 115 47.0
PSO447G0355 Papaver somniferum HOM05D006096 ORTHO05D007775 4.8e-19 98.2 127 44.1
arahy.Tifrunner.gnm1.ann1.C4UPUA Arachis hypogaea HOM05D006096 ORTHO05D007775 6.3e-19 97.8 116 45.7
EL10Ac6g15136 Beta vulgaris HOM05D006096 ORTHO05D007775 6.3e-19 97.8 127 46.5
A10p27260 Brassica napus HOM05D006096 ORTHO05D007775 6.3e-19 97.8 116 42.2
BraA10t44776Z Brassica rapa HOM05D006096 ORTHO05D007775 6.3e-19 97.8 116 42.2
MBI02_g02177_MAGBIO Magnolia biondii HOM05D006096 ORTHO05D007775 8.2e-19 97.4 133 45.9
Potri.005G073600 Populus trichocarpa HOM05D006096 ORTHO05D007775 8.2e-19 97.4 128 42.2
QL06p048476 Quercus lobata HOM05D006096 ORTHO05D007775 8.2e-19 97.4 127 40.9
COL.COLO4_27275 Corchorus olitorius HOM05D006096 ORTHO05D007775 1.1e-18 97.1 106 47.2
ECA246G2908 Erigeron canadensis HOM05D006096 ORTHO05D007775 1.1e-18 97.1 111 46.8
MD01G1033500 Malus domestica HOM05D006096 ORTHO05D007775 1.4e-18 96.7 119 42.0
Sp6g33110 Schrenkiella parvula HOM05D006096 ORTHO05D007775 1.4e-18 96.7 127 39.4
Zm00001eb081250 Zea mays HOM05D006096 ORTHO05D007775 1.4e-18 96.7 116 43.1
ClCG07G017370 Citrullus lanatus HOM05D006096 ORTHO05D007775 1.8e-18 96.3 117 43.6
FvH4_1g20510 Fragaria vesca HOM05D006096 ORTHO05D007775 1.8e-18 96.3 123 42.3
FAN23G0863 Fragaria x ananassa HOM05D006096 ORTHO05D007775 1.8e-18 96.3 114 44.7
AT5G10320 Arabidopsis thaliana HOM05D006096 ORTHO05D007775 3.1e-18 95.5 123 40.7
Cfa002624 Carpinus fangiana HOM05D006096 ORTHO05D007775 3.1e-18 95.5 115 44.3
Manes.13G095500 Manihot esculenta HOM05D006096 ORTHO05D007775 4.1e-18 95.1 120 44.2
Pp3c26_3770 Physcomitrium patens HOM05D006096 ORTHO05D007775 4.1e-18 95.1 111 44.1
CARHR202960 Cardamine hirsuta HOM05D006096 ORTHO05D007775 9.1e-18 94.0 123 41.5
Migut.H02345 Erythranthe guttata HOM05D006096 ORTHO05D007775 9.1e-18 94.0 123 43.9
AagrBONN_evm.TU.Sc2ySwM_344.1220 Anthoceros agrestis HOM05D006096 ORTHO05D007775 1.2e-17 93.6 103 49.5
RcHm_v2.0_Chr2g0112761 Rosa chinensis HOM05D006096 ORTHO05D007775 1.2e-17 93.6 111 43.2
Lsat_1_v5_gn_5_34320 Lactuca sativa HOM05D006096 ORTHO05D007775 1.6e-17 93.2 123 39.8
Mapoly0077s0016 Marchantia polymorpha HOM05D006096 ORTHO05D007775 2.0e-17 92.8 161 39.8
Lj6g0005810 Lotus japonicus HOM05D006096 ORTHO05D007775 4.5e-17 91.7 115 44.3
Os04g0451100 Oryza sativa ssp. japonica HOM05D006096 ORTHO05D007775 1.7e-16 89.7 109 43.1
ATR0684G225 Amborella trichopoda HOM05D006096 ORTHO05D007775 2.2e-16 89.4 138 38.4
HPP92_011214 Vanilla planifolia HOM05D006096 ORTHO05D007775 2.2e-16 89.4 111 42.3
Sed0027583 Sechium edule HOM05D006096 ORTHO05D007775 2.5e-15 85.9 108 42.6
unitig_899.g14550 Utricularia gibba HOM05D006096 ORTHO05D007775 2.5e-15 85.9 144 36.8
Hund13600 Selenicereus undatus HOM05D006096 ORTHO05D007775 8.0e-14 80.9 157 35.7
HanXRQChr02g0032011 Helianthus annuus HOM05D006096 ORTHO05D007775 3.0e-13 79.0 115 36.5
CBR_g26374 Chara braunii HOM05D006096 ORTHO05D007775 5.2e-13 78.2 160 31.2
MSTRG.23356 Avicennia marina HOM05D006096 ORTHO05D007775 8.8e-13 77.4 86 48.8
HanXRQChr15g0477621 Helianthus annuus HOM05D006096 ORTHO05D007775 1.5e-12 76.6 114 39.5
CBR_g53530 Chara braunii HOM05D006096 ORTHO05D007775 2.2e-11 72.8 114 32.5
Actinidia28854 Actinidia chinensis HOM05D006096 ORTHO05D007775 4.8e-11 71.6 91 45.1
SalBow3G4176 Salvia bowleyana HOM05D006096 ORTHO05D007775 4.8e-11 71.6 86 47.7
MELO3C017606.2 Cucumis melo HOM05D006096 ORTHO05D007775 8.3e-11 70.9 97 40.2
Cc03_g11790 Coffea canephora HOM05D006096 ORTHO05D007775 2.0e-09 66.2 83 47.0
CsaV3_UNG223570 Cucumis sativus L. HOM05D006096 ORTHO05D007775 7.7e-09 64.3 82 42.7
AUR62003818 Chenopodium quinoa HOM05D006096 ORTHO05D007775 1.0e-08 63.9 98 37.8
Rhsim08G0012600 Rhododendron simsii HOM05D006096 ORTHO05D007775 1.3e-08 63.5 87 39.1
Nitab4.5_0000743g0130 Nicotiana tabacum HOM05D006096 ORTHO05D007775 6.5e-08 61.2 42 64.3
Sabra05G0060100 Salix brachista HOM05D006096 ORTHO05D007775 8.5e-08 60.8 61 49.2
Ca_16518_v3 Cicer arietinum L. HOM05D006096 ORTHO05D007775 1.1e-07 60.5 85 36.5


User provided reference genes

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