Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01818 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 6.1e-191 670.6 329 100.0
SEGI_17223 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 1.1e-62 244.6 229 62.4
SEGI_37289 Sequoiadendron giganteum HOM05D000058 ORTHO05D000255 2.8e-18 97.1 54 81.5
SEGI_11315 Sequoiadendron giganteum HOM05D000190 ORTHO05D000113 5.2e-17 92.8 98 52.0
SEGI_40030 Sequoiadendron giganteum HOM05D023718 ORTHO05D009378 3.4e-16 90.1 80 61.2
TWI09G0039 Tripterygium wilfordii HOM05D006144 ORTHO05D006357 2.8e-10 70.5 90 45.6
MSTRG.2895 Avicennia marina HOM05D006144 ORTHO05D006357 4.7e-10 69.7 134 35.8
PSO541G4136 Papaver somniferum HOM05D006144 ORTHO05D006357 1.1e-09 68.6 90 40.0
SEGI_04958 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 2.3e-09 67.4 35 80.0
PSO675G0817 Papaver somniferum HOM05D006144 ORTHO05D006357 5.2e-09 66.2 90 38.9
Gohir.A11G046100 Gossypium hirsutum HOM05D006144 ORTHO05D006357 6.8e-09 65.9 105 41.9
Thecc.01G052700 Theobroma cacao HOM05D006144 ORTHO05D006357 6.8e-09 65.9 90 44.4
Cfa003998 Carpinus fangiana HOM05D006144 ORTHO05D006357 8.9e-09 65.5 90 44.4
Gohir.D11G049700 Gossypium hirsutum HOM05D006144 ORTHO05D006357 8.9e-09 65.5 105 41.0
Gorai.007G053500 Gossypium raimondii HOM05D006144 ORTHO05D006357 8.9e-09 65.5 105 41.0
Haze_15426 Corylus avellana HOM05D006144 ORTHO05D006357 1.2e-08 65.1 90 44.4
FvH4_1g15710 Fragaria vesca HOM05D006144 ORTHO05D006357 2.0e-08 64.3 93 40.9
FAN19G3143 Fragaria x ananassa HOM05D006144 ORTHO05D006357 2.0e-08 64.3 93 40.9
FAN26G0177 Fragaria x ananassa HOM05D006144 ORTHO05D006357 2.6e-08 63.9 93 39.8
TAR381G1042 Trochodendron aralioides HOM05D006144 ORTHO05D006357 3.4e-08 63.5 90 42.2
CiPaw.01G021400 Carya illinoinensis HOM05D006144 ORTHO05D006357 4.4e-08 63.2 90 42.2
FAN28G0789 Fragaria x ananassa HOM05D006144 ORTHO05D006357 4.4e-08 63.2 90 42.2
Lalb_Chr16g0388301 Lupinus albus HOM05D006144 ORTHO05D006357 4.4e-08 63.2 93 38.7
MBI18_g39491_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000001 4.4e-08 63.2 73 42.5
COL.COLO4_22183 Corchorus olitorius HOM05D006144 ORTHO05D006357 5.8e-08 62.8 90 38.9
Sabra07G0036900 Salix brachista HOM05D006144 ORTHO05D006357 5.8e-08 62.8 93 40.9
Atru.chr3.396 Acer truncatum HOM05D006144 ORTHO05D006357 7.5e-08 62.4 93 39.8
FAN23G0857 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.7e-07 61.2 93 38.7
TPR.G640 Trifolium pratense HOM05D006144 ORTHO05D006357 1.7e-07 61.2 90 40.0
Lj2g0024358 Lotus japonicus HOM05D006144 ORTHO05D006357 2.9e-07 60.5 90 41.1
MD03G1286700 Malus domestica HOM05D000002 ORTHO05D000001 2.9e-07 60.5 43 58.1
MD04G1193900 Malus domestica HOM05D000002 ORTHO05D000001 2.9e-07 60.5 43 58.1
RcHm_v2.0_Chr2g0105021 Rosa chinensis HOM05D006144 ORTHO05D006357 2.9e-07 60.5 93 38.7
SEGI_22991 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 2.9e-07 60.5 67 44.8
MBI13_g13247_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000001 3.7e-07 60.1 48 50.0
MD15G1281500 Malus domestica HOM05D006144 ORTHO05D006357 6.4e-07 59.3 90 36.7
Duzib147G1467 Durio zibethinus HOM05D006144 ORTHO05D006357 8.3e-07 58.9 90 40.0
MBI08_g22293_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000001 8.3e-07 58.9 73 39.7
MBI09_g47645_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000001 8.3e-07 58.9 73 39.7
SEGI_21749 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 8.3e-07 58.9 36 63.9
MBI12_g41013_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000001 1.1e-06 58.5 49 46.9
SEGI_12845 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.1e-06 58.5 78 46.2
SEGI_34605 Sequoiadendron giganteum HOM05D000110 ORTHO05D000024 1.1e-06 58.5 36 61.1
CANSAT01G0270 Cannabis sativa HOM05D006144 ORTHO05D006357 1.4e-06 58.2 90 40.0
Potri.007G041300 Populus trichocarpa HOM05D006144 ORTHO05D006357 1.4e-06 58.2 93 38.7
SEGI_14033 Sequoiadendron giganteum HOM05D000359 ORTHO05D000251 1.4e-06 58.2 55 47.3
CSS0009151 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 1.9e-06 57.8 90 36.7
CSS0011451 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 1.9e-06 57.8 90 36.7
ClCG01G016710 Citrullus lanatus HOM05D006144 ORTHO05D006357 1.9e-06 57.8 92 39.1
MBI11_g16092_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000001 1.9e-06 57.8 73 39.7
Manes.12G100500 Manihot esculenta HOM05D006144 ORTHO05D006357 1.9e-06 57.8 90 40.0
Nn5g30196 Nelumbo nucifera HOM05D006144 ORTHO05D006357 1.9e-06 57.8 90 37.8
Prupe.7G136200 Prunus persica HOM05D006144 ORTHO05D006357 1.9e-06 57.8 90 38.9
TAR588G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.9e-06 57.8 75 41.3
ATR0104G015 Amborella trichopoda HOM05D006144 ORTHO05D006357 2.4e-06 57.4 90 37.8
Migut.H00451 Erythranthe guttata HOM05D006144 ORTHO05D006357 2.4e-06 57.4 91 41.8
MD02G1169100 Malus domestica HOM05D006144 ORTHO05D006357 2.4e-06 57.4 90 37.8
Nn1g05861 Nelumbo nucifera HOM05D006144 ORTHO05D006357 2.4e-06 57.4 93 39.8
Oeu049306.1 Olea europaea HOM05D006144 ORTHO05D006357 2.4e-06 57.4 136 33.1
QL06p042250 Quercus lobata HOM05D006144 ORTHO05D006357 2.4e-06 57.4 92 41.3
vmacro05326 Vaccinium macrocarpon HOM05D006144 ORTHO05D006357 2.4e-06 57.4 90 38.9
GSVIVG01002633001 Vitis vinifera HOM05D006144 ORTHO05D006357 2.4e-06 57.4 92 39.1
EL10Ac6g15152 Beta vulgaris HOM05D006144 ORTHO05D006357 3.2e-06 57.0 90 38.9
Cc07_g05860 Coffea canephora HOM05D006144 ORTHO05D006357 3.2e-06 57.0 93 38.7
Rhsim10G0119800 Rhododendron simsii HOM05D006144 ORTHO05D006357 4.1e-06 56.6 90 40.0
Ciclev10024721m.g Citrus clementina HOM05D006144 ORTHO05D006357 5.4e-06 56.2 93 36.6
MBI03_g40381_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000001 5.4e-06 56.2 42 52.4
Potri.005G136600 Populus trichocarpa HOM05D006144 ORTHO05D006357 5.4e-06 56.2 96 38.5
SEGI_08378 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.4e-06 56.2 37 54.1
THA.LOC104804508 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 5.4e-06 56.2 137 30.7
THA.LOC104826201 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 5.4e-06 56.2 137 30.7
arahy.Tifrunner.gnm1.ann1.AH11HU Arachis hypogaea HOM05D006144 ORTHO05D006357 7.1e-06 55.8 90 38.9
CSS0044544 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 7.1e-06 55.8 93 40.9
SEGI_23220 Sequoiadendron giganteum HOM05D000038 ORTHO05D000612 7.1e-06 55.8 36 58.3
arahy.Tifrunner.gnm1.ann1.IY5EPV Arachis hypogaea HOM05D006144 ORTHO05D006357 9.2e-06 55.5 90 38.9
Hma1.2p1_0200F.1_g086100 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 9.2e-06 55.5 97 40.2
SHI29459 Sapria himalayana HOM05D005355 ORTHO05D006591 9.2e-06 55.5 118 32.2
SEGI_34057 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 9.2e-06 55.5 37 56.8


User provided reference genes

Program Settings