Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01794 Sequoiadendron giganteum HOM05D004553 ORTHO05D005426 7.9e-86 320.5 169 100.0
Solyc08g077830.1 Solanum lycopersicum HOM05D004553 ORTHO05D005426 2.5e-31 139.4 94 72.3
Ah.02g111810 Amaranthus hybridus HOM05D004553 ORTHO05D005426 4.3e-31 138.7 92 73.9
CAN.G572.12 Capsicum annuum HOM05D004553 ORTHO05D005426 7.3e-31 137.9 92 73.9
Nitab4.5_0009451g0050 Nicotiana tabacum HOM05D004553 ORTHO05D005426 1.2e-30 137.1 92 73.9
Hund09587 Selenicereus undatus HOM05D004553 ORTHO05D005426 1.2e-30 137.1 92 73.9
Sopen08g026340 Solanum pennellii HOM05D004553 ORTHO05D005426 1.6e-30 136.7 94 71.3
AUR62024744 Chenopodium quinoa HOM05D004553 ORTHO05D005426 2.1e-30 136.3 92 72.8
Nitab4.5_0000500g0290 Nicotiana tabacum HOM05D004553 ORTHO05D005426 2.1e-30 136.3 101 70.3
Aqoxy5G00280 Aquilegia oxysepala HOM05D004553 ORTHO05D005426 2.8e-30 136.0 91 75.8
EL10Ac5g10427 Beta vulgaris HOM05D004553 ORTHO05D005426 2.8e-30 136.0 92 73.9
AUR62011903 Chenopodium quinoa HOM05D004553 ORTHO05D005426 2.8e-30 136.0 92 72.8
FAN15G2654 Fragaria x ananassa HOM05D004553 ORTHO05D005426 3.6e-30 135.6 104 69.2
FAN24G1077 Fragaria x ananassa HOM05D004553 ORTHO05D005426 3.6e-30 135.6 105 67.6
MD10G1187900 Malus domestica HOM05D004553 ORTHO05D005426 4.7e-30 135.2 97 71.1
PGSC0003DMG400026216 Solanum tuberosum HOM05D004553 ORTHO05D005426 4.7e-30 135.2 100 69.0
MBI17_g17502_MAGBIO Magnolia biondii HOM05D004553 ORTHO05D005426 6.1e-30 134.8 91 74.7
Nitab4.5_0001839g0070 Nicotiana tabacum HOM05D004553 ORTHO05D005426 1.0e-29 134.0 92 72.8
ATR0794G102 Amborella trichopoda HOM05D004553 ORTHO05D005426 1.4e-29 133.7 90 75.6
FvH4_2g22010 Fragaria vesca HOM05D004553 ORTHO05D005426 1.8e-29 133.3 101 68.3
DCAR_012530 Daucus carota HOM05D004553 ORTHO05D005426 2.3e-29 132.9 90 73.3
RcHm_v2.0_Chr6g0288871 Rosa chinensis HOM05D004553 ORTHO05D005426 2.3e-29 132.9 101 68.3
FAN27G3448 Fragaria x ananassa HOM05D004553 ORTHO05D005426 3.1e-29 132.5 100 69.0
Manes.05G087500 Manihot esculenta HOM05D004553 ORTHO05D005426 3.1e-29 132.5 90 75.6
PSO832G2284 Papaver somniferum HOM05D004553 ORTHO05D005426 4.0e-29 132.1 90 74.4
FAN20G1146 Fragaria x ananassa HOM05D004553 ORTHO05D005426 5.2e-29 131.7 100 69.0
BcaC07g40188 Brassica carinata HOM05D004553 ORTHO05D005426 6.8e-29 131.3 88 76.1
Peaxi162Scf00324g00032 Petunia axillaris HOM05D004553 ORTHO05D005426 6.8e-29 131.3 99 66.7
Haze_24589 Corylus avellana HOM05D004553 ORTHO05D005426 8.9e-29 131.0 98 69.4
Haze_24593 Corylus avellana HOM05D004553 ORTHO05D005426 8.9e-29 131.0 98 69.4
Os12g0626100 Oryza sativa ssp. japonica HOM05D004553 ORTHO05D005426 1.2e-28 130.6 100 70.0
GSVIVG01028297001 Vitis vinifera HOM05D004553 ORTHO05D005426 1.2e-28 130.6 97 69.1
Oeu025823.1 Olea europaea HOM05D004553 ORTHO05D005426 1.5e-28 130.2 92 70.7
THA.LOC104802841 Tarenaya hassleriana HOM05D004553 ORTHO05D005426 1.5e-28 130.2 89 75.3
BolC6t37683H Brassica oleracea HOM05D004553 ORTHO05D005426 2.0e-28 129.8 98 68.4
Cpa.g.sc50.47 Carica papaya HOM05D004553 ORTHO05D005426 2.0e-28 129.8 89 71.9
Cfa002394 Carpinus fangiana HOM05D004553 ORTHO05D005426 2.0e-28 129.8 99 68.7
Eucgr.K03287 Eucalyptus grandis HOM05D004553 ORTHO05D005426 2.0e-28 129.8 89 75.3
PGR044G0761 Punica granatum HOM05D004553 ORTHO05D005426 2.0e-28 129.8 91 72.5
Zm00001eb259150 Zea mays HOM05D004553 ORTHO05D005426 2.0e-28 129.8 93 69.9
Actinidia23392 Actinidia chinensis HOM05D004553 ORTHO05D005426 2.6e-28 129.4 91 72.5
MSTRG.3646 Avicennia marina HOM05D004553 ORTHO05D005426 2.6e-28 129.4 90 73.3
BolC8t50975H Brassica oleracea HOM05D004553 ORTHO05D005426 2.6e-28 129.4 88 75.0
Ciclev10021217m.g Citrus clementina HOM05D004553 ORTHO05D005426 2.6e-28 129.4 101 66.3
MELO3C012740.2 Cucumis melo HOM05D004553 ORTHO05D005426 2.6e-28 129.4 91 71.4
Potri.005G221700 Populus trichocarpa HOM05D004553 ORTHO05D005426 2.6e-28 129.4 90 74.4
Atru.chr5.1915 Acer truncatum HOM05D004553 ORTHO05D005426 3.4e-28 129.0 92 72.8
Actinidia21228 Actinidia chinensis HOM05D004553 ORTHO05D005426 3.4e-28 129.0 91 72.5
ClCG09G008080 Citrullus lanatus HOM05D004553 ORTHO05D005426 3.4e-28 129.0 94 69.1
Sp5g04540 Schrenkiella parvula HOM05D004553 ORTHO05D005426 3.4e-28 129.0 87 74.7
Sed0015397 Sechium edule HOM05D004553 ORTHO05D005426 3.4e-28 129.0 94 68.1
Aa31LG10G12900 Aethionema arabicum HOM05D004553 ORTHO05D005426 4.4e-28 128.6 88 72.7
BcaC07g40268 Brassica carinata HOM05D004553 ORTHO05D005426 4.4e-28 128.6 103 68.0
BcaC08g44904 Brassica carinata HOM05D004553 ORTHO05D005426 4.4e-28 128.6 98 67.3
CsaV3_7G026990 Cucumis sativus L. HOM05D004553 ORTHO05D005426 4.4e-28 128.6 92 70.7
DCAR_009311 Daucus carota HOM05D004553 ORTHO05D005426 4.4e-28 128.6 90 72.2
Gohir.A07G211100 Gossypium hirsutum HOM05D004553 ORTHO05D005426 4.4e-28 128.6 89 74.2
Gohir.D07G217100 Gossypium hirsutum HOM05D004553 ORTHO05D005426 4.4e-28 128.6 89 74.2
PSO541G5588 Papaver somniferum HOM05D004553 ORTHO05D005426 4.4e-28 128.6 90 73.3
Prupe.8G227700 Prunus persica HOM05D004553 ORTHO05D005426 4.4e-28 128.6 92 72.8
Rhsim01G0266400 Rhododendron simsii HOM05D004553 ORTHO05D005426 4.4e-28 128.6 92 70.7
A09p50940 Brassica napus HOM05D004553 ORTHO05D005426 5.8e-28 128.3 102 68.6
BraA09t40540Z Brassica rapa HOM05D004553 ORTHO05D005426 5.8e-28 128.3 102 68.6
TAR636G3311 Trochodendron aralioides HOM05D004553 ORTHO05D005426 5.8e-28 128.3 91 68.1
HanXRQChr10g0281111 Helianthus annuus HOM05D004553 ORTHO05D005426 7.5e-28 127.9 92 69.6
MD05G1201100 Malus domestica HOM05D004553 ORTHO05D005426 7.5e-28 127.9 97 69.1
COL.COLO4_05596 Corchorus olitorius HOM05D004553 ORTHO05D005426 9.8e-28 127.5 87 73.6
Migut.D00406 Erythranthe guttata HOM05D004553 ORTHO05D005426 9.8e-28 127.5 92 69.6
Hma1.2p1_0273F.1_g109950 Hydrangea macrophylla HOM05D004553 ORTHO05D005426 9.8e-28 127.5 92 70.7
Nn3g19599 Nelumbo nucifera HOM05D004553 ORTHO05D005426 9.8e-28 127.5 92 70.7
PSO675G7515 Papaver somniferum HOM05D004553 ORTHO05D005426 9.8e-28 127.5 90 72.2
Carub.0005s2503 Capsella rubella HOM05D004553 ORTHO05D005426 1.3e-27 127.1 87 72.4
AT3G58180 Arabidopsis thaliana HOM05D004553 ORTHO05D005426 1.7e-27 126.7 86 73.3
CANSAT21G2336 Cannabis sativa HOM05D004553 ORTHO05D005426 1.7e-27 126.7 92 72.8
TWI12G0019 Tripterygium wilfordii HOM05D004553 ORTHO05D005426 1.7e-27 126.7 101 67.3
Dinv34597 Davidia involucrata HOM05D004553 ORTHO05D005426 2.2e-27 126.3 92 70.7
Duzib138G1605 Durio zibethinus HOM05D004553 ORTHO05D005426 2.2e-27 126.3 85 76.5
CiPaw.03G261300 Carya illinoinensis HOM05D004553 ORTHO05D005426 2.9e-27 125.9 85 75.3
SalBow6G2244 Salvia bowleyana HOM05D004553 ORTHO05D005426 2.9e-27 125.9 92 68.5
Gorai.001G251500 Gossypium raimondii HOM05D004553 ORTHO05D005426 3.7e-27 125.6 89 73.0
Sc05g0000780 Simmondsia chinensis HOM05D004553 ORTHO05D005426 3.7e-27 125.6 91 71.4
Lj1A269G34 Lonicera japonica HOM05D004553 ORTHO05D005426 6.4e-27 124.8 90 68.9
Ca_02526_v3 Cicer arietinum L. HOM05D004553 ORTHO05D005426 8.3e-27 124.4 88 71.6
Phvul.001G159000 Phaseolus vulgaris HOM05D004553 ORTHO05D005426 8.3e-27 124.4 88 71.6
unitig_8.g3887 Utricularia gibba HOM05D004553 ORTHO05D005426 8.3e-27 124.4 90 72.2
VMungo1383G1775 Vigna mungo HOM05D004553 ORTHO05D005426 8.3e-27 124.4 88 71.6
Potri.002G041400 Populus trichocarpa HOM05D004553 ORTHO05D005426 1.1e-26 124.0 87 73.6
vmacro06125 Vaccinium macrocarpon HOM05D004553 ORTHO05D005426 1.1e-26 124.0 94 69.1
Glyma.03G161100 Glycine max HOM05D004553 ORTHO05D005426 1.4e-26 123.6 85 72.9
Medtr7g096510 Medicago truncatula HOM05D004553 ORTHO05D005426 1.4e-26 123.6 96 67.7
Nn1g02691 Nelumbo nucifera HOM05D004553 ORTHO05D005426 1.4e-26 123.6 90 71.1
Sed0016387 Sechium edule HOM05D004553 ORTHO05D005426 1.4e-26 123.6 94 66.0
TPR.G5760 Trifolium pratense HOM05D004553 ORTHO05D005426 1.4e-26 123.6 88 72.7
TAR365G0062 Trochodendron aralioides HOM05D004553 ORTHO05D005426 1.4e-26 123.6 92 66.3
BcaB02g07544 Brassica carinata HOM05D004553 ORTHO05D005426 1.9e-26 123.2 85 74.1
TPR.G18834 Trifolium pratense HOM05D004553 ORTHO05D005426 1.9e-26 123.2 89 71.9
QL09p037745 Quercus lobata HOM05D004553 ORTHO05D005426 2.4e-26 122.9 99 67.7
Lsat_1_v5_gn_9_9101 Lactuca sativa HOM05D004553 ORTHO05D005426 3.2e-26 122.5 90 68.9
arahy.Tifrunner.gnm1.ann1.9FA7V6 Arachis hypogaea HOM05D004553 ORTHO05D005426 4.1e-26 122.1 91 68.1
HPP92_007745 Vanilla planifolia HOM05D004553 ORTHO05D005426 4.1e-26 122.1 89 70.8
Psat3g059120 Pisum sativum HOM05D004553 ORTHO05D005426 5.4e-26 121.7 96 66.7
A07p23970 Brassica napus HOM05D004553 ORTHO05D005426 7.0e-26 121.3 83 74.7
BraA07t30048Z Brassica rapa HOM05D004553 ORTHO05D005426 7.0e-26 121.3 83 74.7
C06p25240 Brassica napus HOM05D004553 ORTHO05D005426 1.2e-25 120.6 93 67.7
C08p33760 Brassica napus HOM05D004553 ORTHO05D005426 2.7e-25 119.4 98 67.3
Thhalv10006107m.g Eutrema salsugineum HOM05D004553 ORTHO05D005426 3.5e-25 119.0 83 72.3
arahy.Tifrunner.gnm1.ann1.6P10V3 Arachis hypogaea HOM05D004553 ORTHO05D005426 7.8e-25 117.9 89 67.4
Sabra02G0033000 Salix brachista HOM05D004553 ORTHO05D005426 7.8e-25 117.9 85 72.9
SGA_v2.0_scaffold31G12652 Striga asiatica HOM05D004553 ORTHO05D005426 1.0e-24 117.5 102 60.8
arahy.Tifrunner.gnm1.ann1.1I5KFR Arachis hypogaea HOM05D004553 ORTHO05D005426 1.3e-24 117.1 89 67.4
vmacro02641 Vaccinium macrocarpon HOM05D004553 ORTHO05D005426 1.3e-24 117.1 94 66.0
AL5G39880 Arabidopsis lyrata HOM05D004553 ORTHO05D005426 1.7e-24 116.7 106 60.4
arahy.Tifrunner.gnm1.ann1.59X69N Arachis hypogaea HOM05D004553 ORTHO05D005426 1.7e-24 116.7 89 67.4
Lalb_Chr20g0107851 Lupinus albus HOM05D004553 ORTHO05D005426 2.3e-24 116.3 85 69.4
Cc03_g10870 Coffea canephora HOM05D004553 ORTHO05D005426 3.9e-24 115.5 88 68.2
Glyma.19G162800 Glycine max HOM05D001448 ORTHO05D005781 6.6e-24 114.8 88 67.0
Psat0s2295g0120 Pisum sativum HOM05D004553 ORTHO05D005426 6.6e-24 114.8 96 63.5
Os12g0163300 Oryza sativa ssp. japonica HOM05D004553 ORTHO05D005426 1.1e-23 114.0 96 63.5
HPP92_007825 Vanilla planifolia HOM05D004553 ORTHO05D005426 1.5e-20 103.6 89 61.8
CDE04G0333 Ceratophyllum demersum HOM05D004553 ORTHO05D005426 2.0e-20 103.2 77 70.1
SMO304G0012 Selaginella moellendorffii HOM05D004553 ORTHO05D005426 4.9e-19 98.6 80 66.2
TWI18G0975 Tripterygium wilfordii HOM05D004553 ORTHO05D005426 4.1e-18 95.5 95 56.8
SHI26037 Sapria himalayana HOM05D004553 ORTHO05D000023 4.6e-17 92.0 163 38.0
CBR_g46193 Chara braunii HOM05D004553 ORTHO05D005426 7.8e-17 91.3 88 54.5
vmacro03822 Vaccinium macrocarpon HOM05D004553 ORTHO05D005426 1.0e-16 90.9 116 48.3
CARHR168550 Cardamine hirsuta HOM05D004553 ORTHO05D005426 1.7e-16 90.1 60 76.7
AagrBONN_evm.TU.Sc2ySwM_117.1472 Anthoceros agrestis HOM05D004553 ORTHO05D005426 1.5e-15 87.0 83 62.7
AagrBONN_evm.TU.Sc2ySwM_228.3863 Anthoceros agrestis HOM05D004553 ORTHO05D005426 4.3e-15 85.5 74 64.9
Pp3c11_17490 Physcomitrium patens HOM05D004553 ORTHO05D005426 2.8e-14 82.8 99 53.5
Cre10.g435550 Chlamydomonas reinhardtii HOM05D004553 ORTHO05D005426 4.4e-12 75.5 90 44.4
MCO15G119 Micromonas commoda HOM05D004553 ORTHO05D005426 8.3e-11 71.2 78 53.8
FvH4_2g19410 Fragaria vesca HOM05D004553 ORTHO05D005426 1.1e-10 70.9 46 71.7
Oeu016862.1 Olea europaea HOM05D004553 ORTHO05D005426 2.4e-10 69.7 88 50.0
Oeu058648.1 Olea europaea HOM05D004553 ORTHO05D005426 5.4e-10 68.6 108 46.3
Thecc.01G262600 Theobroma cacao HOM05D004553 ORTHO05D005426 1.7e-08 63.5 97 44.3
CDE04G1470 Ceratophyllum demersum HOM05D004553 ORTHO05D005426 3.9e-08 62.4 68 48.5
ECA247G2484 Erigeron canadensis HOM05D004553 ORTHO05D005426 8.6e-08 61.2 96 40.6
Psat0s2088g0080 Pisum sativum HOM05D004553 ORTHO05D005426 1.5e-07 60.5 68 47.1
Psat0s2087g0120 Pisum sativum HOM05D004553 ORTHO05D005426 1.9e-07 60.1 68 47.1
BcaC01g01031 Brassica carinata HOM05D004553 ORTHO05D005426 2.5e-07 59.7 94 40.4
C03p87400 Brassica napus HOM05D004553 ORTHO05D005426 2.5e-07 59.7 94 40.4
BolC3t21049H Brassica oleracea HOM05D004553 ORTHO05D005426 2.5e-07 59.7 94 40.4
PRCOL_00005471 Prasinoderma coloniale HOM05D004553 ORTHO05D005426 5.6e-07 58.5 90 40.0
Haze_27369 Corylus avellana HOM05D004553 ORTHO05D005426 1.2e-06 57.4 73 46.6
Mapoly0065s0014 Marchantia polymorpha HOM05D004553 ORTHO05D005426 3.6e-06 55.8 74 41.9


User provided reference genes

Program Settings