Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01785 Sequoiadendron giganteum HOM05D004019 ORTHO05D005136 1.3e-299 1032.3 526 100.0
ATR1120G055 Amborella trichopoda HOM05D004019 ORTHO05D005136 2.8e-137 493.0 517 50.9
Aqoxy7G01749 Aquilegia oxysepala HOM05D004019 ORTHO05D005136 2.9e-134 483.0 513 50.3
FvH4_2g30330 Fragaria vesca HOM05D004019 ORTHO05D005136 3.5e-132 476.1 514 48.6
Dinv14207 Davidia involucrata HOM05D004019 ORTHO05D005136 1.3e-131 474.2 513 49.1
TAR624G1332 Trochodendron aralioides HOM05D004019 ORTHO05D005136 1.7e-131 473.8 521 49.7
RcHm_v2.0_Chr6g0312581 Rosa chinensis HOM05D004019 ORTHO05D005136 1.5e-130 470.7 514 48.4
Prupe.1G464500 Prunus persica HOM05D004019 ORTHO05D005136 3.3e-130 469.5 513 48.5
CSS0034867 Camellia sinensis var. sinensis HOM05D004019 ORTHO05D005136 7.3e-130 468.4 517 50.1
Ca_15687_v3 Cicer arietinum L. HOM05D004019 ORTHO05D005136 1.2e-129 467.6 517 48.7
FAN20G0521 Fragaria x ananassa HOM05D004019 ORTHO05D005136 1.2e-129 467.6 514 47.7
MD15G1113500 Malus domestica HOM05D004019 ORTHO05D005136 3.6e-129 466.1 517 48.5
Lj1g0020850 Lotus japonicus HOM05D004019 ORTHO05D005136 6.2e-129 465.3 516 48.1
Nn8g39221 Nelumbo nucifera HOM05D004019 ORTHO05D005136 1.1e-128 464.5 515 48.9
Atru.chr7.2305 Acer truncatum HOM05D004019 ORTHO05D005136 4.0e-128 462.6 518 50.0
PSO782G0289 Papaver somniferum HOM05D004019 ORTHO05D005136 5.2e-128 462.2 494 51.0
MBI03_g19627_MAGBIO Magnolia biondii HOM05D004019 ORTHO05D005136 2.0e-127 460.3 514 50.0
Ciclev10007225m.g Citrus clementina HOM05D004019 ORTHO05D005136 3.4e-127 459.5 513 48.9
Dinv30236 Davidia involucrata HOM05D004019 ORTHO05D005136 9.9e-127 458.0 513 48.5
Psat5g025600 Pisum sativum HOM05D004019 ORTHO05D005136 1.3e-126 457.6 520 48.8
TPR.G12417 Trifolium pratense HOM05D004019 ORTHO05D005136 1.3e-126 457.6 525 48.6
Lalb_Chr11g0064021 Lupinus albus HOM05D004019 ORTHO05D005136 1.7e-126 457.2 513 47.6
Rhsim02G0185100 Rhododendron simsii HOM05D004019 ORTHO05D005136 2.2e-126 456.8 516 47.7
Medtr3g108360 Medicago truncatula HOM05D004019 ORTHO05D005136 4.9e-126 455.7 513 48.7
PSO063G5962 Papaver somniferum HOM05D004019 ORTHO05D005136 6.4e-126 455.3 513 50.1
CiPaw.07G216600 Carya illinoinensis HOM05D004019 ORTHO05D005136 2.4e-125 453.4 513 48.3
FAN24G2881 Fragaria x ananassa HOM05D004019 ORTHO05D005136 2.4e-125 453.4 530 46.0
PGR031G1071 Punica granatum HOM05D004019 ORTHO05D005136 4.1e-125 452.6 513 47.0
TWI63G0705 Tripterygium wilfordii HOM05D004019 ORTHO05D005136 3.5e-124 449.5 517 48.0
arahy.Tifrunner.gnm1.ann1.P4KF2E Arachis hypogaea HOM05D004019 ORTHO05D005136 1.7e-123 447.2 513 46.6
Sopen08g021930 Solanum pennellii HOM05D004019 ORTHO05D005136 2.3e-123 446.8 513 47.0
arahy.Tifrunner.gnm1.ann1.WYF2AC Arachis hypogaea HOM05D004019 ORTHO05D005136 3.9e-123 446.0 513 46.6
HanXRQChr17g0539391 Helianthus annuus HOM05D004019 ORTHO05D005136 8.6e-123 444.9 514 48.4
Phvul.009G099400 Phaseolus vulgaris HOM05D004019 ORTHO05D005136 1.1e-122 444.5 512 45.7
Lsat_1_v5_gn_3_27801 Lactuca sativa HOM05D004019 ORTHO05D005136 2.8e-121 439.9 516 47.5
Glyma.06G074700 Glycine max HOM05D004019 ORTHO05D005136 6.2e-121 438.7 514 46.5
CANSAT25G1365 Cannabis sativa HOM05D004019 ORTHO05D005136 8.9e-120 434.9 517 45.5
Potri.006G244900 Populus trichocarpa HOM05D004019 ORTHO05D005136 8.9e-120 434.9 520 46.7
ECA246G1280 Erigeron canadensis HOM05D004019 ORTHO05D005136 2.0e-119 433.7 517 46.8
GSVIVG01035749001 Vitis vinifera HOM05D004019 ORTHO05D005136 2.6e-119 433.3 517 45.6
Cc08_g08140 Coffea canephora HOM05D004019 ORTHO05D005136 4.4e-119 432.6 513 45.4
CANSAT56G4370 Cannabis sativa HOM05D004019 ORTHO05D005136 1.7e-118 430.6 520 45.4
Actinidia13300 Actinidia chinensis HOM05D004019 ORTHO05D005136 1.4e-117 427.6 517 44.7
Manes.03G064200 Manihot esculenta HOM05D004019 ORTHO05D005136 1.9e-117 427.2 493 47.3
COL.COLO4_18737 Corchorus olitorius HOM05D004019 ORTHO05D005136 7.1e-117 425.2 517 45.1
Migut.A00257 Erythranthe guttata HOM05D004019 ORTHO05D005136 3.9e-115 419.5 513 44.6
DCAR_006255 Daucus carota HOM05D004019 ORTHO05D005136 7.3e-114 415.2 514 46.7
Thecc.09G037700 Theobroma cacao HOM05D004019 ORTHO05D005136 9.6e-114 414.8 516 45.3
Sc09g0008920 Simmondsia chinensis HOM05D004019 ORTHO05D005136 4.8e-113 412.5 513 44.4
Eucgr.C01572 Eucalyptus grandis HOM05D004019 ORTHO05D005136 1.4e-112 411.0 515 44.9
Gorai.009G053000 Gossypium raimondii HOM05D004019 ORTHO05D005136 1.4e-112 411.0 513 44.1
Gohir.A05G049400 Gossypium hirsutum HOM05D004019 ORTHO05D005136 1.8e-112 410.6 513 43.5
vmacro11102 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 3.1e-112 409.8 583 41.2
AT2G25730 Arabidopsis thaliana HOM05D004019 ORTHO05D005136 5.3e-112 409.1 513 44.1
Thhalv10000005m.g Eutrema salsugineum HOM05D004019 ORTHO05D005136 3.8e-110 402.9 513 43.3
Sp4g05330 Schrenkiella parvula HOM05D004019 ORTHO05D005136 8.4e-110 401.7 515 43.3
AL4G17350 Arabidopsis lyrata HOM05D004019 ORTHO05D005136 1.9e-109 400.6 513 43.1
EL10Ac2g02527 Beta vulgaris HOM05D004019 ORTHO05D005136 1.9e-109 400.6 513 43.9
Haze_21656 Corylus avellana HOM05D004019 ORTHO05D005136 1.9e-109 400.6 611 38.3
Sabra06G0191800 Salix brachista HOM05D004019 ORTHO05D005136 3.2e-109 399.8 539 42.9
THA.LOC104803772 Tarenaya hassleriana HOM05D004019 ORTHO05D005136 4.2e-109 399.4 514 42.8
Carub.0004s0550 Capsella rubella HOM05D004019 ORTHO05D005136 9.3e-109 398.3 513 43.3
Sed0026885 Sechium edule HOM05D004019 ORTHO05D005136 2.1e-108 397.1 522 43.3
HPP92_006442 Vanilla planifolia HOM05D004019 ORTHO05D005136 4.6e-108 396.0 512 42.8
MSTRG.25887 Avicennia marina HOM05D004019 ORTHO05D005136 6.0e-108 395.6 514 42.8
Aa31LG5G9950 Aethionema arabicum HOM05D004019 ORTHO05D005136 1.3e-107 394.4 512 42.8
CsaV3_3G046830 Cucumis sativus L. HOM05D004019 ORTHO05D005136 2.3e-107 393.7 518 44.2
AUR62032391 Chenopodium quinoa HOM05D004019 ORTHO05D005136 6.6e-107 392.1 486 44.9
C03p32450 Brassica napus HOM05D004019 ORTHO05D005136 1.5e-106 391.0 512 43.2
BolC3t15586H Brassica oleracea HOM05D004019 ORTHO05D005136 1.5e-106 391.0 512 43.2
A03p27040 Brassica napus HOM05D004019 ORTHO05D005136 1.9e-106 390.6 518 43.1
BraA03t11915Z Brassica rapa HOM05D004019 ORTHO05D005136 1.9e-106 390.6 518 43.1
Cpa.g.sc205.19 Carica papaya HOM05D004019 ORTHO05D005136 9.6e-106 388.3 503 44.5
AUR62024824 Chenopodium quinoa HOM05D004019 ORTHO05D005136 4.8e-105 386.0 485 43.9
CARHR115530 Cardamine hirsuta HOM05D004019 ORTHO05D005136 6.2e-105 385.6 513 42.5
Zm00001eb161040 Zea mays HOM05D004019 ORTHO05D005136 1.8e-104 384.0 511 43.6
Pp3c19_2530 Physcomitrium patens HOM05D004019 ORTHO05D005136 3.2e-101 373.2 498 43.6
Ah.12g060350 Amaranthus hybridus HOM05D004019 ORTHO05D005136 7.1e-101 372.1 515 42.5
Mapoly0049s0060 Marchantia polymorpha HOM05D004019 ORTHO05D005136 2.3e-99 367.1 500 41.2
SGA_v2.0_scaffold280G46835 Striga asiatica HOM05D004019 ORTHO05D005136 4.3e-98 362.8 552 39.7
QL12p030952 Quercus lobata HOM05D004019 ORTHO05D005136 1.8e-96 357.5 367 50.7
Peaxi162Scf00105g00812 Petunia axillaris HOM05D004019 ORTHO05D005136 2.2e-94 350.5 369 49.1
Solyc08g068040.3 Solanum lycopersicum HOM05D004019 ORTHO05D005136 4.9e-94 349.4 369 49.1
CDE10G0881 Ceratophyllum demersum HOM05D004019 ORTHO05D005136 2.5e-90 337.0 466 42.1
Nitab4.5_0000250g0110 Nicotiana tabacum HOM05D004019 ORTHO05D005136 1.3e-89 334.7 389 47.0
ClCG05G017320 Citrullus lanatus HOM05D004019 ORTHO05D005136 1.4e-85 321.2 372 46.8
SHI11647 Sapria himalayana HOM05D004019 ORTHO05D005136 3.3e-82 310.1 515 37.3
SalBow4G2655 Salvia bowleyana HOM05D004019 ORTHO05D005136 1.3e-81 308.1 388 43.0
Hma1.2p1_0140F.1_g063760 Hydrangea macrophylla HOM05D004019 ORTHO05D005136 1.2e-76 291.6 311 49.5
unitig_747.g21874 Utricularia gibba HOM05D004019 ORTHO05D005136 6.1e-60 236.1 337 43.3
Nitab4.5_0002393g0030 Nicotiana tabacum HOM05D004019 ORTHO05D005136 4.0e-59 233.4 299 44.8
CBR_g31401 Chara braunii HOM05D004019 ORTHO05D005136 4.8e-57 226.5 510 33.7
SMO172G0089 Selaginella moellendorffii HOM05D004019 ORTHO05D005136 3.2e-53 213.8 507 31.6
AagrBONN_evm.TU.Sc2ySwM_340.130 Anthoceros agrestis HOM05D004019 ORTHO05D005136 1.1e-45 188.7 526 28.3
MELO3C003655.2 Cucumis melo HOM05D004019 ORTHO05D005136 7.5e-42 176.0 241 42.7
QL12p030977 Quercus lobata HOM05D004019 ORTHO05D005136 6.2e-20 103.2 143 42.7
Solyc08g068030.1 Solanum lycopersicum HOM05D004019 ORTHO05D005136 8.1e-20 102.8 147 41.5
Lj8C607G10 Lonicera japonica HOM05D004019 ORTHO05D005136 1.4e-19 102.1 143 42.7
PGR042G0250 Punica granatum HOM05D004019 ORTHO05D005136 4.9e-17 93.6 145 35.9
Oeu022768.1 Olea europaea HOM05D004019 ORTHO05D005136 1.2e-12 79.0 127 37.0
Prupe.5G112400 Prunus persica HOM05D004019 ORTHO05D005136 2.2e-09 68.2 123 38.2
Prupe.5G099400 Prunus persica HOM05D004019 ORTHO05D005136 1.1e-08 65.9 72 47.2


User provided reference genes

Program Settings