Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01647 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 2.2e-188 662.1 335 100.0
SEGI_26559 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 2.5e-144 515.8 382 72.0
Glyma.17G167200 Glycine max HOM05D005694 ORTHO05D007402 1.2e-96 357.5 378 51.3
Duzib264G0643 Durio zibethinus HOM05D005694 ORTHO05D007402 3.4e-96 355.9 372 51.1
AL8G44040 Arabidopsis lyrata HOM05D005694 ORTHO05D007402 7.5e-96 354.8 366 51.9
BcaC05g29844 Brassica carinata HOM05D005694 ORTHO05D007402 9.8e-96 354.4 368 51.4
BolC5t34672H Brassica oleracea HOM05D005694 ORTHO05D007402 9.8e-96 354.4 368 51.4
FAN23G2399 Fragaria x ananassa HOM05D005694 ORTHO05D007402 2.2e-95 353.2 388 51.8
FvH4_1g16760 Fragaria vesca HOM05D005694 ORTHO05D007402 2.8e-95 352.8 385 51.9
COL.COLO4_11482 Corchorus olitorius HOM05D005694 ORTHO05D007402 3.7e-95 352.4 372 50.3
Prupe.6G229100 Prunus persica HOM05D005694 ORTHO05D007402 4.9e-95 352.1 379 50.9
ATR1098G030 Amborella trichopoda HOM05D005694 ORTHO05D007402 8.3e-95 351.3 365 51.8
AagrBONN_evm.TU.Sc2ySwM_117.3787 Anthoceros agrestis HOM05D005694 ORTHO05D007402 3.1e-94 349.4 383 50.7
AUR62003938 Chenopodium quinoa HOM05D005694 ORTHO05D007402 4.1e-94 349.0 368 51.9
EL10Ac6g15690 Beta vulgaris HOM05D005694 ORTHO05D007402 5.4e-94 348.6 394 49.7
A05p41050 Brassica napus HOM05D005694 ORTHO05D007402 5.4e-94 348.6 370 51.4
BcaB06g28844 Brassica carinata HOM05D005694 ORTHO05D007402 9.2e-94 347.8 374 50.8
Gorai.007G218000 Gossypium raimondii HOM05D005694 ORTHO05D007402 9.2e-94 347.8 387 49.6
Hund16366 Selenicereus undatus HOM05D005694 ORTHO05D007402 9.2e-94 347.8 368 51.1
RcHm_v2.0_Chr2g0106661 Rosa chinensis HOM05D005694 ORTHO05D007402 1.2e-93 347.4 387 50.6
Carub.0008s2721 Capsella rubella HOM05D005694 ORTHO05D007402 1.6e-93 347.1 368 50.0
Lj4g0009127 Lotus japonicus HOM05D005694 ORTHO05D007402 2.0e-93 346.7 370 50.3
Thecc.01G063300 Theobroma cacao HOM05D005694 ORTHO05D007402 2.7e-93 346.3 367 50.1
Gohir.D11G203300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 3.5e-93 345.9 370 50.3
BraA05t22832Z Brassica rapa HOM05D005694 ORTHO05D007402 5.9e-93 345.1 378 50.5
QL06p040237 Quercus lobata HOM05D005694 ORTHO05D007402 7.8e-93 344.7 383 50.7
FAN19G0282 Fragaria x ananassa HOM05D005694 ORTHO05D007402 1.3e-92 344.0 385 51.2
Sopen03g008170 Solanum pennellii HOM05D005694 ORTHO05D007402 1.3e-92 344.0 385 48.8
MSTRG.2849 Avicennia marina HOM05D005694 ORTHO05D007402 1.7e-92 343.6 381 48.8
CARHR280330 Cardamine hirsuta HOM05D005694 ORTHO05D007402 2.3e-92 343.2 382 49.7
AT5G67290 Arabidopsis thaliana HOM05D005694 ORTHO05D007402 2.9e-92 342.8 382 50.3
Thhalv10004317m.g Eutrema salsugineum HOM05D005694 ORTHO05D007402 2.9e-92 342.8 368 50.5
FAN26G1197 Fragaria x ananassa HOM05D005694 ORTHO05D007402 2.9e-92 342.8 385 50.9
Sp2g29370 Schrenkiella parvula HOM05D005694 ORTHO05D007402 3.8e-92 342.4 366 51.1
MELO3C007585.2 Cucumis melo HOM05D005694 ORTHO05D007402 5.0e-92 342.0 386 49.2
Cfa004061 Carpinus fangiana HOM05D005694 ORTHO05D007402 6.6e-92 341.7 384 49.7
AUR62038254 Chenopodium quinoa HOM05D005694 ORTHO05D007402 6.6e-92 341.7 386 49.0
ClCG01G017080 Citrullus lanatus HOM05D005694 ORTHO05D007402 8.6e-92 341.3 386 49.0
Ca_22124_v3 Cicer arietinum L. HOM05D005694 ORTHO05D007402 1.1e-91 340.9 374 50.3
VMungo0251G0564 Vigna mungo HOM05D005694 ORTHO05D007402 1.1e-91 340.9 365 50.4
Mapoly0178s0017 Marchantia polymorpha HOM05D005694 ORTHO05D007402 1.9e-91 340.1 383 47.8
C05p60220 Brassica napus HOM05D005694 ORTHO05D007402 2.5e-91 339.7 398 47.7
Oeu037163.1 Olea europaea HOM05D005694 ORTHO05D007402 2.5e-91 339.7 374 48.7
unitig_46.g18707 Utricularia gibba HOM05D005694 ORTHO05D007402 2.5e-91 339.7 374 47.9
Ciclev10025664m.g Citrus clementina HOM05D005694 ORTHO05D007402 3.3e-91 339.3 394 47.7
CsaV3_6G043550 Cucumis sativus L. HOM05D005694 ORTHO05D007402 4.3e-91 339.0 385 48.8
Solyc03g044190.3 Solanum lycopersicum HOM05D005694 ORTHO05D007402 4.3e-91 339.0 385 48.1
Haze_15351 Corylus avellana HOM05D005694 ORTHO05D007402 5.6e-91 338.6 384 49.0
HanXRQChr12g0377261 Helianthus annuus HOM05D005694 ORTHO05D007402 9.5e-91 337.8 383 48.0
arahy.Tifrunner.gnm1.ann1.ZT89Y7 Arachis hypogaea HOM05D005694 ORTHO05D007402 1.2e-90 337.4 372 49.5
Potri.005G060500 Populus trichocarpa HOM05D005694 ORTHO05D007402 1.2e-90 337.4 368 50.5
Nn1g04704 Nelumbo nucifera HOM05D005694 ORTHO05D007402 1.6e-90 337.0 364 51.1
SGA_v2.0_scaffold143G35788 Striga asiatica HOM05D005694 ORTHO05D007402 2.1e-90 336.7 378 48.9
CANSAT25G2140 Cannabis sativa HOM05D005694 ORTHO05D007402 2.8e-90 336.3 379 48.5
PGR004G1079 Punica granatum HOM05D005694 ORTHO05D007402 2.8e-90 336.3 392 48.7
Sabra05G0051000 Salix brachista HOM05D005694 ORTHO05D007402 2.8e-90 336.3 370 49.5
Psat4g084360 Pisum sativum HOM05D005694 ORTHO05D007402 3.6e-90 335.9 381 47.8
TPR.G23863 Trifolium pratense HOM05D005694 ORTHO05D007402 3.6e-90 335.9 371 49.3
PGSC0003DMG400014873 Solanum tuberosum HOM05D005694 ORTHO05D007402 6.1e-90 335.1 381 47.5
CANSAT25G0291 Cannabis sativa HOM05D005694 ORTHO05D007402 8.0e-90 334.7 381 48.8
Medtr4g094962 Medicago truncatula HOM05D005694 ORTHO05D007402 1.0e-89 334.3 379 48.0
Phvul.003G240300 Phaseolus vulgaris HOM05D005694 ORTHO05D007402 1.4e-89 334.0 365 50.4
Sed0004561 Sechium edule HOM05D005694 ORTHO05D007402 2.3e-89 333.2 388 48.5
Lsat_1_v5_gn_3_88661 Lactuca sativa HOM05D005694 ORTHO05D007402 4.0e-89 332.4 369 48.5
MD02G1178800 Malus domestica HOM05D005694 ORTHO05D007402 4.0e-89 332.4 357 51.0
Cpa.g.sc6.99 Carica papaya HOM05D005694 ORTHO05D007402 5.2e-89 332.0 383 47.8
Nitab4.5_0003962g0030 Nicotiana tabacum HOM05D005694 ORTHO05D007402 1.2e-88 330.9 388 46.9
Manes.12G108400 Manihot esculenta HOM05D005694 ORTHO05D007402 2.0e-88 330.1 382 48.7
Nitab4.5_0002657g0010 Nicotiana tabacum HOM05D005694 ORTHO05D007402 2.6e-88 329.7 389 46.3
Aa31LG1G15820 Aethionema arabicum HOM05D005694 ORTHO05D007402 9.8e-88 327.8 368 48.1
PSO541G0377 Papaver somniferum HOM05D005694 ORTHO05D007402 1.7e-87 327.0 370 48.1
Peaxi162Scf00365g00618 Petunia axillaris HOM05D005694 ORTHO05D007402 2.9e-87 326.2 382 46.9
Pp3c14_12180 Physcomitrium patens HOM05D005694 ORTHO05D007402 2.9e-87 326.2 371 49.3
CiPaw.01G012900 Carya illinoinensis HOM05D005694 ORTHO05D007402 8.3e-87 324.7 372 48.4
Aqoxy6G02871 Aquilegia oxysepala HOM05D005694 ORTHO05D007402 1.4e-86 323.9 384 47.1
Atru.chr3.251 Acer truncatum HOM05D005694 ORTHO05D007402 1.8e-86 323.6 376 48.4
THA.LOC104819246 Tarenaya hassleriana HOM05D005694 ORTHO05D007402 1.8e-86 323.6 368 48.9
PSO675G2151 Papaver somniferum HOM05D005694 ORTHO05D007402 5.4e-86 322.0 387 47.3
TAR381G0027 Trochodendron aralioides HOM05D005694 ORTHO05D007402 5.4e-86 322.0 369 50.1
TAR381G0285 Trochodendron aralioides HOM05D005694 ORTHO05D007402 5.4e-86 322.0 369 50.1
Migut.H00394 Erythranthe guttata HOM05D005694 ORTHO05D007402 7.0e-86 321.6 385 46.5
Rhsim10G0112600 Rhododendron simsii HOM05D005694 ORTHO05D007402 7.0e-86 321.6 368 47.8
Actinidia12019 Actinidia chinensis HOM05D005694 ORTHO05D007402 1.2e-85 320.9 357 49.9
ECA246G1807 Erigeron canadensis HOM05D005694 ORTHO05D007402 1.6e-85 320.5 376 46.8
TAR625G0317 Trochodendron aralioides HOM05D005694 ORTHO05D007402 2.0e-85 320.1 372 47.3
SMO351G0208 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 2.7e-85 319.7 380 44.5
Lalb_Chr16g0388811 Lupinus albus HOM05D005694 ORTHO05D007402 3.0e-84 316.2 371 47.7
Cc11_g04760 Coffea canephora HOM05D005694 ORTHO05D007402 5.0e-84 315.5 353 48.7
Sc16g0005230 Simmondsia chinensis HOM05D005694 ORTHO05D007402 5.0e-84 315.5 390 46.7
Lj4g0018653 Lotus japonicus HOM05D005694 ORTHO05D007402 1.1e-83 314.3 375 47.7
Gohir.A11G220300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 1.9e-83 313.5 386 45.9
HPP92_017733 Vanilla planifolia HOM05D005694 ORTHO05D007402 3.3e-83 312.8 364 50.0
CDE06G0326 Ceratophyllum demersum HOM05D005694 ORTHO05D007402 1.2e-82 310.8 362 47.0
DCAR_025759 Daucus carota HOM05D005694 ORTHO05D007402 1.6e-82 310.5 346 49.4
Eucgr.I00761 Eucalyptus grandis HOM05D005694 ORTHO05D007402 2.1e-82 310.1 378 46.6
arahy.Tifrunner.gnm1.ann1.MA1EVV Arachis hypogaea HOM05D005694 ORTHO05D007402 4.7e-82 308.9 440 42.0
Eucgr.I00787 Eucalyptus grandis HOM05D005694 ORTHO05D007402 6.2e-82 308.5 378 46.6
CSS0006569 Camellia sinensis var. sinensis HOM05D005694 ORTHO05D007402 8.0e-82 308.1 367 47.1
TAR625G0863 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.4e-81 307.4 363 47.1
SMO367G0384 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 1.8e-81 307.0 378 46.3
Duzib147G1433 Durio zibethinus HOM05D005694 ORTHO05D007402 4.0e-81 305.8 374 46.3
Zm00001eb300250 Zea mays HOM05D005694 ORTHO05D007402 7.5e-80 301.6 376 48.4
Os07g0155100 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 6.4e-79 298.5 399 46.9
Mapoly0178s0018 Marchantia polymorpha HOM05D005694 ORTHO05D007402 8.3e-79 298.1 277 54.9
Dinv26866 Davidia involucrata HOM05D005694 ORTHO05D007402 7.0e-78 295.0 361 47.1
Glyma.05G097800 Glycine max HOM05D005694 ORTHO05D007402 1.1e-75 287.7 279 53.8
Sc16g0005220 Simmondsia chinensis HOM05D005694 ORTHO05D007402 8.9e-73 278.1 390 43.3
Lj7C77T1 Lonicera japonica HOM05D005694 ORTHO05D007402 8.3e-71 271.6 263 55.1
vmacro05254 Vaccinium macrocarpon HOM05D005694 ORTHO05D007402 3.2e-70 269.6 400 42.2
HPP92_017700 Vanilla planifolia HOM05D005694 ORTHO05D007402 2.7e-69 266.5 268 55.2
HanXRQChr02g0044351 Helianthus annuus HOM05D005694 ORTHO05D007402 3.3e-67 259.6 365 40.5
ECA238G4251 Erigeron canadensis HOM05D005694 ORTHO05D007402 2.2e-63 246.9 365 40.8
Dinv30033 Davidia involucrata HOM05D005694 ORTHO05D007402 7.1e-62 241.9 356 41.0
Cre16.g671450 Chlamydomonas reinhardtii HOM05D005694 ORTHO05D007402 1.9e-59 233.8 389 39.8
MCO03G407 Micromonas commoda HOM05D005694 ORTHO05D007402 7.1e-46 188.7 389 36.0
CAN.G572.58 Capsicum annuum HOM05D005694 ORTHO05D007402 2.3e-44 183.7 278 40.3
Aa31LG1G15830 Aethionema arabicum HOM05D005694 ORTHO05D007402 3.1e-41 173.3 226 42.0
MCO09G374 Micromonas commoda HOM05D005694 ORTHO05D007402 1.2e-37 161.4 403 33.7
Actinidia36463 Actinidia chinensis HOM05D005694 ORTHO05D007402 5.6e-35 152.5 136 56.6
FAN28G1711 Fragaria x ananassa HOM05D005694 ORTHO05D007402 5.8e-32 142.5 178 44.9
FAN28G1889 Fragaria x ananassa HOM05D005694 ORTHO05D007402 5.8e-32 142.5 178 44.9
Aa31LG1G15840 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.3e-26 124.8 110 60.0
Aa31LG1G18440 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.4e-25 121.3 143 48.3
Aa31sc2295G20 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.3e-23 114.8 127 46.5
PRCOL_00002834 Prasinoderma coloniale HOM05D005694 ORTHO05D007402 8.5e-23 112.1 335 31.6
Cfa023451 Carpinus fangiana HOM05D000115 ORTHO05D005317 6.1e-21 105.9 389 28.5
Lj7A77T5 Lonicera japonica HOM05D005694 ORTHO05D007402 1.2e-08 65.1 40 65.0


User provided reference genes

Program Settings