Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01562 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 2.4e-149 532.3 306 100.0
SEGI_07594 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.2e-100 370.5 318 70.4
TAR362G1102 Trochodendron aralioides HOM05D003822 ORTHO05D004484 2.5e-61 240.0 298 57.0
Glyma.15G027800 Glycine max HOM05D003822 ORTHO05D004484 3.5e-60 236.1 298 58.4
RcHm_v2.0_Chr1g0340971 Rosa chinensis HOM05D003822 ORTHO05D004484 4.6e-60 235.7 323 50.8
Nn7g37555 Nelumbo nucifera HOM05D003822 ORTHO05D004484 6.1e-60 235.3 308 54.2
Glyma.13G346400 Glycine max HOM05D003822 ORTHO05D004484 1.0e-59 234.6 303 56.4
Gorai.007G162100 Gossypium raimondii HOM05D003822 ORTHO05D004484 1.0e-59 234.6 317 48.3
COL.COLO4_29926 Corchorus olitorius HOM05D003822 ORTHO05D004484 2.3e-59 233.4 321 53.0
Gohir.D11G153200 Gossypium hirsutum HOM05D003822 ORTHO05D004484 3.0e-59 233.0 317 47.9
TPR.G6564 Trifolium pratense HOM05D003822 ORTHO05D004484 3.0e-59 233.0 310 51.9
vmacro14674 Vaccinium macrocarpon HOM05D003822 ORTHO05D004484 3.0e-59 233.0 298 56.4
VMungo1080G0920 Vigna mungo HOM05D003822 ORTHO05D004484 3.9e-59 232.6 299 54.2
FAN18G3379 Fragaria x ananassa HOM05D003822 ORTHO05D004484 5.1e-59 232.3 318 52.5
FAN04G1289 Fragaria x ananassa HOM05D003822 ORTHO05D004484 1.1e-58 231.1 318 52.5
FAN08G2486 Fragaria x ananassa HOM05D003822 ORTHO05D004484 1.9e-58 230.3 318 49.7
Hma1.2p1_0635F.1_g193140 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 4.3e-58 229.2 309 51.5
Gohir.A11G145000 Gossypium hirsutum HOM05D003822 ORTHO05D004484 5.7e-58 228.8 307 49.8
Glyma.11G125400 Glycine max HOM05D003822 ORTHO05D004484 1.3e-57 227.6 307 51.8
SGA_v2.0_scaffold77G25327 Striga asiatica HOM05D003822 ORTHO05D004484 2.2e-57 226.9 296 50.0
Oeu013421.2 Olea europaea HOM05D003822 ORTHO05D004484 3.7e-57 226.1 299 50.2
Cc02_g30690 Coffea canephora HOM05D003822 ORTHO05D004484 8.2e-57 224.9 306 51.0
Hma1.2p1_2403F.1_g321420 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 1.8e-56 223.8 303 56.4
Manes.13G057600 Manihot esculenta HOM05D003822 ORTHO05D004484 1.8e-56 223.8 299 55.2
Potri.017G018400 Populus trichocarpa HOM05D003822 ORTHO05D004484 3.1e-56 223.0 318 51.9
Eucgr.A00039 Eucalyptus grandis HOM05D003822 ORTHO05D004484 1.2e-55 221.1 308 52.6
Lalb_Chr22g0352031 Lupinus albus HOM05D003822 ORTHO05D004484 1.5e-55 220.7 294 52.7
VMungo1127G1572 Vigna mungo HOM05D003822 ORTHO05D004484 1.5e-55 220.7 301 51.2
Nn1g09539 Nelumbo nucifera HOM05D003822 ORTHO05D004484 3.4e-55 219.5 298 52.3
TWI36G1391 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 3.4e-55 219.5 302 55.3
TWI36G1709 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 3.4e-55 219.5 302 55.3
Peaxi162Scf00995g00322 Petunia axillaris HOM05D003822 ORTHO05D004484 4.5e-55 219.2 302 49.3
ECA248G1190 Erigeron canadensis HOM05D002050 ORTHO05D001949 1.0e-54 218.0 289 47.4
TAR633G2284 Trochodendron aralioides HOM05D003822 ORTHO05D004484 1.0e-54 218.0 294 52.4
Thecc.01G205200 Theobroma cacao HOM05D003822 ORTHO05D004484 5.0e-54 215.7 306 52.0
Eucgr.H00681 Eucalyptus grandis HOM05D003822 ORTHO05D004484 6.5e-54 215.3 331 44.4
MSTRG.17947 Avicennia marina HOM05D003822 ORTHO05D004484 8.5e-54 214.9 305 50.8
Haze_01421 Corylus avellana HOM05D003822 ORTHO05D004484 1.1e-53 214.5 320 47.5
Lalb_Chr24g0396641 Lupinus albus HOM05D003822 ORTHO05D004484 3.2e-53 213.0 333 45.6
Sabra14G0133100 Salix brachista HOM05D003822 ORTHO05D004484 5.5e-53 212.2 304 51.3
Phvul.005G155400 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 7.2e-53 211.8 304 55.3
Medtr2g099360 Medicago truncatula HOM05D003822 ORTHO05D004484 1.2e-52 211.1 319 53.0
RcHm_v2.0_Chr7g0230961 Rosa chinensis HOM05D003822 ORTHO05D004484 1.6e-52 210.7 317 50.8
ATR0752G090 Amborella trichopoda HOM05D003822 ORTHO05D004484 6.1e-52 208.8 307 52.4
Dinv28779 Davidia involucrata HOM05D003822 ORTHO05D004484 6.1e-52 208.8 291 54.3
Ciclev10021425m.g Citrus clementina HOM05D003822 ORTHO05D004484 1.0e-51 208.0 296 53.0
FvH4_5g32960 Fragaria vesca HOM05D003822 ORTHO05D004484 1.0e-51 208.0 318 50.0
QL10p052081 Quercus lobata HOM05D003822 ORTHO05D004484 1.0e-51 208.0 324 44.8
Solyc06g007700.4 Solanum lycopersicum HOM05D003822 ORTHO05D004484 1.4e-51 207.6 295 53.6
Actinidia23132 Actinidia chinensis HOM05D003822 ORTHO05D004484 1.8e-51 207.2 295 45.8
MD04G1046700 Malus domestica HOM05D003822 ORTHO05D004484 2.3e-51 206.8 319 49.2
Aqoxy2G04159 Aquilegia oxysepala HOM05D003822 ORTHO05D004484 6.7e-51 205.3 316 49.1
Duzib211G0255 Durio zibethinus HOM05D003822 ORTHO05D004484 8.8e-51 204.9 301 50.8
ECA236G4570 Erigeron canadensis HOM05D003822 ORTHO05D004484 1.1e-50 204.5 297 52.2
CDE02G4798 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 2.0e-50 203.8 297 50.5
Os03g0786000 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 2.0e-50 203.8 304 48.7
CDE05G3137 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 2.5e-50 203.4 303 48.5
Prupe.1G200400 Prunus persica HOM05D003822 ORTHO05D004484 3.3e-50 203.0 318 45.6
TAR365G1107 Trochodendron aralioides HOM05D003822 ORTHO05D004484 5.7e-50 202.2 297 49.5
arahy.Tifrunner.gnm1.ann1.0NAL6S Arachis hypogaea HOM05D003822 ORTHO05D004484 7.4e-50 201.8 301 50.8
Cpa.g.sc8.23 Carica papaya HOM05D003822 ORTHO05D004484 1.3e-49 201.1 296 56.8
TWI18G0659 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 1.3e-49 201.1 293 51.5
MELO3C017788.2 Cucumis melo HOM05D003822 ORTHO05D004484 2.2e-49 200.3 313 49.2
Nitab4.5_0003952g0050 Nicotiana tabacum HOM05D003822 ORTHO05D004484 2.8e-49 199.9 307 52.4
arahy.Tifrunner.gnm1.ann1.1KAH27 Arachis hypogaea HOM05D003822 ORTHO05D004484 3.7e-49 199.5 301 50.5
Sabra17G0014400 Salix brachista HOM05D000455 ORTHO05D000434 1.1e-48 198.0 305 50.5
CiPaw.02G103400 Carya illinoinensis HOM05D003822 ORTHO05D004484 1.4e-48 197.6 300 53.3
Ciclev10016105m.g Citrus clementina HOM05D003822 ORTHO05D004484 1.4e-48 197.6 305 47.9
Cfa015215 Carpinus fangiana HOM05D003822 ORTHO05D004484 2.4e-48 196.8 310 47.4
HPP92_015668 Vanilla planifolia HOM05D003822 ORTHO05D004484 2.4e-48 196.8 288 50.7
Manes.12G057507 Manihot esculenta HOM05D003822 ORTHO05D004484 3.1e-48 196.4 305 51.5
Manes.12G057905 Manihot esculenta HOM05D003822 ORTHO05D004484 3.1e-48 196.4 305 51.5
Nitab4.5_0002641g0020 Nicotiana tabacum HOM05D003822 ORTHO05D004484 5.3e-48 195.7 304 50.7
Sc19g0002790 Simmondsia chinensis HOM05D003822 ORTHO05D004484 5.3e-48 195.7 313 42.8
Duzib138G1354 Durio zibethinus HOM05D003822 ORTHO05D004484 9.1e-48 194.9 297 55.2
Actinidia34522 Actinidia chinensis HOM05D003822 ORTHO05D004484 1.2e-47 194.5 299 49.2
CiPaw.01G173700 Carya illinoinensis HOM05D003822 ORTHO05D004484 1.2e-47 194.5 305 48.9
HanXRQChr10g0281191 Helianthus annuus HOM05D003822 ORTHO05D004484 1.2e-47 194.5 316 41.8
Duzib133G0954 Durio zibethinus HOM05D003822 ORTHO05D004484 2.0e-47 193.7 293 49.5
Sabra07G0108500 Salix brachista HOM05D003822 ORTHO05D004484 2.6e-47 193.4 315 43.2
Sabra07G0120800 Salix brachista HOM05D003822 ORTHO05D004484 2.6e-47 193.4 315 43.2
Ca_01239_v3 Cicer arietinum L. HOM05D003822 ORTHO05D004484 5.9e-47 192.2 314 44.9
SEGI_02285 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 7.7e-47 191.8 130 85.4
Peaxi162Scf00372g00722 Petunia axillaris HOM05D003822 ORTHO05D004484 1.0e-46 191.4 286 51.4
THA.LOC104822456 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 1.7e-46 190.7 308 43.8
Ah.07g202460 Amaranthus hybridus HOM05D003822 ORTHO05D004484 2.9e-46 189.9 304 46.4
MBI02_g24302_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 3.8e-46 189.5 312 46.8
PGR102G0947 Punica granatum HOM05D003822 ORTHO05D004484 5.0e-46 189.1 321 42.1
PSO837G0022 Papaver somniferum HOM05D003822 ORTHO05D004484 6.5e-46 188.7 312 49.4
Lj3g0024368 Lotus japonicus HOM05D003822 ORTHO05D004484 8.5e-46 188.3 298 45.3
Sopen06g002590 Solanum pennellii HOM05D003822 ORTHO05D004484 1.1e-45 188.0 295 51.2
HanXRQChr01g0010521 Helianthus annuus HOM05D003822 ORTHO05D004484 1.4e-45 187.6 312 44.9
AL3G18900 Arabidopsis lyrata HOM05D003822 ORTHO05D004484 3.2e-45 186.4 308 48.4
PSO017G3256 Papaver somniferum HOM05D003822 ORTHO05D004484 4.2e-45 186.0 312 49.0
THA.LOC104819024 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 4.2e-45 186.0 323 43.7
Manes.12G058903 Manihot esculenta HOM05D003822 ORTHO05D004484 7.2e-45 185.3 304 51.6
Sed0005976 Sechium edule HOM05D003822 ORTHO05D004484 7.2e-45 185.3 297 51.9
Sed0021377 Sechium edule HOM05D003822 ORTHO05D004484 7.2e-45 185.3 313 47.6
Atru.chr6.3488 Acer truncatum HOM05D003822 ORTHO05D004484 1.2e-44 184.5 313 49.8
Zm00001eb117520 Zea mays HOM05D003822 ORTHO05D004484 2.7e-44 183.3 289 48.4
Os07g0152800 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 4.7e-44 182.6 301 50.8
AUR62002363 Chenopodium quinoa HOM05D003822 ORTHO05D004484 6.1e-44 182.2 312 46.8
unitig_22.g5196 Utricularia gibba HOM05D003822 ORTHO05D004484 6.1e-44 182.2 298 44.3
Hund03185 Selenicereus undatus HOM05D003822 ORTHO05D004484 1.8e-43 180.6 306 44.1
Lsat_1_v5_gn_8_98601 Lactuca sativa HOM05D003822 ORTHO05D004484 3.0e-43 179.9 314 45.9
Lj3g0026330 Lotus japonicus HOM05D003822 ORTHO05D004484 3.0e-43 179.9 310 49.0
MD00G1127600 Malus domestica HOM05D003822 ORTHO05D004484 5.1e-43 179.1 314 47.8
Thhalv10021215m.g Eutrema salsugineum HOM05D003822 ORTHO05D004484 8.8e-43 178.3 305 48.2
CANSAT56G4141 Cannabis sativa HOM05D003822 ORTHO05D004484 1.1e-42 177.9 324 46.9
CANSAT11G1915 Cannabis sativa HOM05D003822 ORTHO05D004484 1.5e-42 177.6 305 49.8
CSS0026869 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 2.6e-42 176.8 298 50.7
Aa31LG5G18100 Aethionema arabicum HOM05D003822 ORTHO05D004484 3.3e-42 176.4 325 47.4
A05p40650 Brassica napus HOM05D003822 ORTHO05D004484 5.7e-42 175.6 314 39.8
Carub.0003s0711 Capsella rubella HOM05D003822 ORTHO05D004484 1.3e-41 174.5 306 47.1
Manes.11G127100 Manihot esculenta HOM05D003822 ORTHO05D004484 1.3e-41 174.5 280 45.0
Sabra17G0002300 Salix brachista HOM05D000455 ORTHO05D000434 1.3e-41 174.5 355 41.4
BraA05t22796Z Brassica rapa HOM05D003822 ORTHO05D004484 1.7e-41 174.1 313 39.6
AT3G07560 Arabidopsis thaliana HOM05D003822 ORTHO05D004484 2.8e-41 173.3 313 44.7
Sp3g06480 Schrenkiella parvula HOM05D003822 ORTHO05D004484 8.2e-41 171.8 309 44.3
BcaC01g04277 Brassica carinata HOM05D003822 ORTHO05D004484 1.8e-40 170.6 314 38.5
C03p42940 Brassica napus HOM05D003822 ORTHO05D004484 1.8e-40 170.6 314 38.5
C05p59760 Brassica napus HOM05D003822 ORTHO05D004484 1.8e-40 170.6 312 40.7
BcaB03g14694 Brassica carinata HOM05D003822 ORTHO05D004484 2.4e-40 170.2 315 45.4
PGSC0003DMG400020658 Solanum tuberosum HOM05D003822 ORTHO05D004484 4.1e-40 169.5 325 43.1
CsaV3_4G002560 Cucumis sativus L. HOM05D003822 ORTHO05D004484 5.3e-40 169.1 310 44.2
Zm00001eb059960 Zea mays HOM05D003822 ORTHO05D004484 9.1e-40 168.3 298 46.0
EL10Ac3g06027 Beta vulgaris HOM05D003822 ORTHO05D004484 1.2e-39 167.9 312 43.6
CSS0006211 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 1.5e-39 167.5 215 56.3
SEGI_40649 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 2.0e-39 167.2 131 71.8
Potri.014G197200 Populus trichocarpa HOM05D003822 ORTHO05D004484 3.5e-39 166.4 292 48.6
PGR083G0513 Punica granatum HOM05D003822 ORTHO05D004484 1.0e-38 164.9 295 51.2
A03p35330 Brassica napus HOM05D003822 ORTHO05D004484 3.8e-38 162.9 324 40.7
SGA_v2.0_scaffold95G28678 Striga asiatica HOM05D003822 ORTHO05D004484 3.8e-38 162.9 245 44.5
BolC5t34630H Brassica oleracea HOM05D003822 ORTHO05D004484 2.5e-37 160.2 314 40.4
SMO146G0020 Selaginella moellendorffii HOM05D003822 ORTHO05D004484 2.5e-37 160.2 326 39.6
Lsat_1_v5_gn_5_175601 Lactuca sativa HOM05D003822 ORTHO05D004484 3.2e-37 159.8 303 46.9
CAN.G181.49 Capsicum annuum HOM05D003822 ORTHO05D004484 2.7e-36 156.8 295 46.8
Migut.N00690 Erythranthe guttata HOM05D003822 ORTHO05D004484 2.7e-36 156.8 304 45.7
Pp3c11_19790 Physcomitrium patens HOM05D003822 ORTHO05D004484 2.7e-36 156.8 303 46.2
BcaC05g29550 Brassica carinata HOM05D003822 ORTHO05D004484 2.3e-35 153.7 293 41.0
BolC3t16562H Brassica oleracea HOM05D003822 ORTHO05D004484 3.3e-34 149.8 312 40.4
CBR_g38951 Chara braunii HOM05D003822 ORTHO05D004484 4.4e-34 149.4 331 46.8
ClCG07G011660 Citrullus lanatus HOM05D003822 ORTHO05D004484 9.7e-34 148.3 395 36.5
BcaB04g21287 Brassica carinata HOM05D003822 ORTHO05D004484 3.7e-33 146.4 261 42.1
Oeu020438.1 Olea europaea HOM05D003822 ORTHO05D004484 1.4e-32 144.4 115 59.1
SEGI_24544 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.8e-32 144.1 138 60.9
Mapoly0080s0067 Marchantia polymorpha HOM05D003822 ORTHO05D004484 4.1e-32 142.9 325 44.6
Actinidia11655 Actinidia chinensis HOM05D003822 ORTHO05D004484 5.3e-32 142.5 216 53.7
PGSC0003DMG400020552 Solanum tuberosum HOM05D003822 ORTHO05D004484 3.5e-31 139.8 119 56.3
Psat5g291600 Pisum sativum HOM05D003822 ORTHO05D004484 1.7e-30 137.5 235 53.6
MBI18_g24478_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 8.5e-30 135.2 290 38.3
AUR62023822 Chenopodium quinoa HOM05D003822 ORTHO05D004484 1.1e-29 134.8 307 39.7
SEGI_25865 Sequoiadendron giganteum HOM05D000010 ORTHO05D004484 3.6e-28 129.8 80 78.8
Phvul.011G052000 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 4.7e-28 129.4 205 47.3
AagrBONN_evm.TU.Sc2ySwM_368.3329 Anthoceros agrestis HOM05D003822 ORTHO05D004484 1.2e-26 124.8 264 48.1
MSTRG.12733 Avicennia marina HOM05D003822 ORTHO05D004484 1.3e-25 121.3 216 50.5
Gorai.N001500 Gossypium raimondii HOM05D003822 ORTHO05D004484 5.4e-24 115.9 305 37.4
Manes.12G058104 Manihot esculenta HOM05D003822 ORTHO05D004484 7.0e-24 115.5 101 59.4
BraA01t04376Z Brassica rapa HOM05D003822 ORTHO05D004484 9.1e-24 115.2 123 49.6
Lj2C1109G11 Lonicera japonica HOM05D003822 ORTHO05D004484 1.0e-22 111.7 301 36.2
BolC1t05546H Brassica oleracea HOM05D003822 ORTHO05D004484 6.5e-22 109.0 228 43.9
FAN01G1095 Fragaria x ananassa HOM05D003822 ORTHO05D004484 4.7e-20 102.8 225 41.8
MCO15G241 Micromonas commoda HOM05D003822 ORTHO05D004484 1.3e-17 94.7 75 61.3
MSTRG.12731 Avicennia marina HOM05D003822 ORTHO05D004484 1.7e-17 94.4 94 53.2
unitig_8.g3681 Utricularia gibba HOM05D003822 ORTHO05D004484 1.8e-16 90.9 166 42.8
Cre13.g574700 Chlamydomonas reinhardtii HOM05D003822 ORTHO05D004484 3.1e-16 90.1 64 65.6
Oeu020439.1 Olea europaea HOM05D003822 ORTHO05D004484 1.7e-14 84.3 85 56.5
CSS0030404 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 1.1e-13 81.6 85 51.8
Gohir.A07G157900 Gossypium hirsutum HOM05D003822 ORTHO05D004484 4.2e-13 79.7 133 43.6
Thecc.04G171800 Theobroma cacao HOM05D003822 ORTHO05D004484 5.5e-13 79.3 120 40.8
Atru.chr4.1339 Acer truncatum HOM05D003822 ORTHO05D004484 4.7e-12 76.3 82 51.2
FAN06G0586 Fragaria x ananassa HOM05D003822 ORTHO05D004484 4.7e-12 76.3 158 48.1
FAN10G3558 Fragaria x ananassa HOM05D003822 ORTHO05D046505 6.1e-12 75.9 83 51.8
CARHR082240 Cardamine hirsuta HOM05D003822 ORTHO05D004484 1.0e-11 75.1 201 46.3
FvH4_7g08180 Fragaria vesca HOM05D003822 ORTHO05D046505 8.9e-11 72.0 81 50.6
CBR_g50337 Chara braunii HOM05D003822 ORTHO05D004484 3.7e-09 66.6 264 39.8
Eucgr.C02476 Eucalyptus grandis HOM05D003822 ORTHO05D004484 5.4e-08 62.8 72 48.6
Eucgr.B03613 Eucalyptus grandis HOM05D003822 ORTHO05D004484 1.2e-07 61.6 69 49.3
Hma1.2p1_0161F.1_g071790 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 1.2e-07 61.6 209 32.1
FAN01G2016 Fragaria x ananassa HOM05D003822 ORTHO05D004484 1.7e-06 57.8 43 67.4
CARHR082220 Cardamine hirsuta HOM05D003822 ORTHO05D004484 2.3e-06 57.4 68 50.0


User provided reference genes

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