Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01550 Sequoiadendron giganteum HOM05D023259 ORTHO05D386900 2.8e-103 378.6 192 100.0
SEGI_25102 Sequoiadendron giganteum HOM05D023259 ORTHO05D386672 2.6e-32 142.9 193 49.2
SEGI_18300 Sequoiadendron giganteum HOM05D023259 ORTHO05D386169 7.2e-27 124.8 94 64.9
SEGI_37965 Sequoiadendron giganteum HOM05D023259 ORTHO05D385496 6.3e-15 85.1 94 54.3
SEGI_26329 Sequoiadendron giganteum HOM05D000026 ORTHO05D000127 5.4e-14 82.0 163 33.7
SEGI_25325 Sequoiadendron giganteum HOM05D000026 ORTHO05D000127 2.5e-11 73.2 163 31.3
CDE09G0102 Ceratophyllum demersum HOM05D000026 ORTHO05D001292 8.0e-10 68.2 175 32.0
Gorai.012G145000 Gossypium raimondii HOM05D000026 ORTHO05D000127 1.8e-09 67.0 192 30.7
BolC9t57527H Brassica oleracea HOM05D000026 ORTHO05D001292 3.1e-09 66.2 176 29.5
PGSC0003DMG400023671 Solanum tuberosum HOM05D000026 ORTHO05D001436 3.1e-09 66.2 163 27.6
C09p46760 Brassica napus HOM05D000026 ORTHO05D001292 4.0e-09 65.9 176 29.5
Os07g0569550 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D000127 4.0e-09 65.9 170 28.2
Atru.chr6.1327 Acer truncatum HOM05D000026 ORTHO05D000127 8.9e-09 64.7 175 30.9
BcaC04g20198 Brassica carinata HOM05D000026 ORTHO05D001292 8.9e-09 64.7 176 29.5
BraA10t43398Z Brassica rapa HOM05D000026 ORTHO05D001292 8.9e-09 64.7 176 29.0
SEGI_06209 Sequoiadendron giganteum HOM05D000026 ORTHO05D000127 8.9e-09 64.7 175 28.0
CDE02G4167 Ceratophyllum demersum HOM05D000026 ORTHO05D001292 1.2e-08 64.3 174 31.0
SEGI_19288 Sequoiadendron giganteum HOM05D000026 ORTHO05D000127 1.2e-08 64.3 174 31.0
SEGI_35864 Sequoiadendron giganteum HOM05D000026 ORTHO05D000127 2.0e-08 63.5 166 30.1
Sp6g17710 Schrenkiella parvula HOM05D000026 ORTHO05D001292 2.6e-08 63.2 169 29.0
Eucgr.E00520 Eucalyptus grandis HOM05D000026 ORTHO05D009413 3.4e-08 62.8 164 29.9
PSO675G8669 Papaver somniferum HOM05D000026 ORTHO05D000127 4.4e-08 62.4 164 30.5
Peaxi162Scf00480g00023 Petunia axillaris HOM05D000026 ORTHO05D001436 4.4e-08 62.4 168 28.0
SEGI_28009 Sequoiadendron giganteum HOM05D000026 ORTHO05D000127 4.4e-08 62.4 172 27.9
THA.LOC104817706 Tarenaya hassleriana HOM05D000026 ORTHO05D001292 4.4e-08 62.4 157 31.8
AT5G55830 Arabidopsis thaliana HOM05D000026 ORTHO05D001292 5.8e-08 62.0 189 28.6
Ciclev10007682m.g Citrus clementina HOM05D000026 ORTHO05D001292 5.8e-08 62.0 170 30.6
BcaB08g35943 Brassica carinata HOM05D000026 ORTHO05D001292 7.5e-08 61.6 215 27.4
Thhalv10012869m.g Eutrema salsugineum HOM05D000026 ORTHO05D001292 7.5e-08 61.6 169 28.4
Oeu049403.1 Olea europaea HOM05D000026 ORTHO05D001292 7.5e-08 61.6 165 30.9
Potri.001G368300 Populus trichocarpa HOM05D000026 ORTHO05D001292 7.5e-08 61.6 169 29.6
SEGI_32155 Sequoiadendron giganteum HOM05D000026 ORTHO05D000127 7.5e-08 61.6 175 30.3
A10p13040 Brassica napus HOM05D000026 ORTHO05D001292 9.8e-08 61.2 210 27.6
MELO3C014117.2 Cucumis melo HOM05D000026 ORTHO05D001292 9.8e-08 61.2 160 31.2
Medtr8g068050 Medicago truncatula HOM05D000026 ORTHO05D000127 9.8e-08 61.2 156 32.7
Sabra11G0088200 Salix brachista HOM05D000026 ORTHO05D001292 9.8e-08 61.2 167 27.5
CAN.G915.17 Capsicum annuum HOM05D000026 ORTHO05D001292 1.3e-07 60.8 173 27.7
Prupe.6G208500 Prunus persica HOM05D000026 ORTHO05D000127 1.3e-07 60.8 174 29.9
Sabra16G0241400 Salix brachista HOM05D000026 ORTHO05D001292 1.3e-07 60.8 159 27.7
Solyc10g080510.1 Solanum lycopersicum HOM05D000026 ORTHO05D001436 1.3e-07 60.8 163 26.4
CARHR269200 Cardamine hirsuta HOM05D000026 ORTHO05D001292 1.7e-07 60.5 172 27.3
MELO3C014953.2 Cucumis melo HOM05D000026 ORTHO05D000127 1.7e-07 60.5 175 32.6
SEGI_28879 Sequoiadendron giganteum HOM05D000026 ORTHO05D013020 1.7e-07 60.5 78 39.7
TPR.G7036 Trifolium pratense HOM05D000026 ORTHO05D000127 1.7e-07 60.5 170 33.5
Duzib106G0281 Durio zibethinus HOM05D002217 ORTHO05D002093 2.2e-07 60.1 169 30.2
Aa31LG3G11730 Aethionema arabicum HOM05D000026 ORTHO05D001292 2.9e-07 59.7 163 27.0
AL8G31390 Arabidopsis lyrata HOM05D000026 ORTHO05D001292 2.9e-07 59.7 183 28.4
CSS0030436 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D001292 2.9e-07 59.7 160 29.4
ClCG10G004440 Citrullus lanatus HOM05D000026 ORTHO05D001292 2.9e-07 59.7 160 30.6
ClCG10G008260 Citrullus lanatus HOM05D000026 ORTHO05D000127 2.9e-07 59.7 175 32.6
Gohir.A04G115975 Gossypium hirsutum HOM05D000026 ORTHO05D000127 2.9e-07 59.7 171 33.3
Gohir.D04G157400 Gossypium hirsutum HOM05D000026 ORTHO05D000127 2.9e-07 59.7 170 31.8
Gorai.012G144800 Gossypium raimondii HOM05D000026 ORTHO05D000127 2.9e-07 59.7 170 31.8
QL05p081357 Quercus lobata HOM05D000026 ORTHO05D000127 2.9e-07 59.7 173 32.4
Sed0021112 Sechium edule HOM05D000026 ORTHO05D000127 2.9e-07 59.7 177 31.1
Sopen10g031060 Solanum pennellii HOM05D000026 ORTHO05D001436 2.9e-07 59.7 170 25.9
Aqoxy4G02293 Aquilegia oxysepala HOM05D000026 ORTHO05D001292 3.7e-07 59.3 160 30.0
CsaV3_3G006980 Cucumis sativus L. HOM05D000026 ORTHO05D000127 3.7e-07 59.3 183 31.1
Gorai.012G144900 Gossypium raimondii HOM05D000026 ORTHO05D000127 3.7e-07 59.3 192 30.2
PSO541G2913 Papaver somniferum HOM05D000026 ORTHO05D000127 3.7e-07 59.3 159 32.1
Rhsim08G0018300 Rhododendron simsii HOM05D000026 ORTHO05D000127 3.7e-07 59.3 158 31.0
PGSC0003DMG400010466 Solanum tuberosum HOM05D000026 ORTHO05D001292 3.7e-07 59.3 173 27.2
TPR.G31842 Trifolium pratense HOM05D000026 ORTHO05D001436 3.7e-07 59.3 158 27.8
Atru.chr3.1197 Acer truncatum HOM05D000026 ORTHO05D000127 4.9e-07 58.9 170 31.2
Cpa.g.sc129.9 Carica papaya HOM05D000026 ORTHO05D000127 4.9e-07 58.9 164 30.5
Manes.12G124400 Manihot esculenta HOM05D000026 ORTHO05D000127 4.9e-07 58.9 168 31.0
Solyc10g084250.1 Solanum lycopersicum HOM05D000026 ORTHO05D001292 4.9e-07 58.9 173 27.2
Sopen10g033690 Solanum pennellii HOM05D000026 ORTHO05D001292 4.9e-07 58.9 173 27.2
COL.COLO4_27058 Corchorus olitorius HOM05D000026 ORTHO05D001292 6.4e-07 58.5 173 31.2
CsaV3_3G004230 Cucumis sativus L. HOM05D000026 ORTHO05D001292 6.4e-07 58.5 160 30.0
Gohir.D04G157500 Gossypium hirsutum HOM05D000026 ORTHO05D000127 6.4e-07 58.5 192 29.7
Gohir.D04G157600 Gossypium hirsutum HOM05D000026 ORTHO05D000127 6.4e-07 58.5 192 29.7
Gorai.002G100600 Gossypium raimondii HOM05D000026 ORTHO05D001292 6.4e-07 58.5 161 30.4
PGR083G0263 Punica granatum HOM05D000026 ORTHO05D001292 6.4e-07 58.5 171 30.4
Rhsim08G0018200 Rhododendron simsii HOM05D000026 ORTHO05D000127 6.4e-07 58.5 157 33.8
CiPaw.08G144200 Carya illinoinensis HOM05D000026 ORTHO05D000127 8.3e-07 58.2 166 30.7
Manes.18G089500 Manihot esculenta HOM05D000026 ORTHO05D001292 8.3e-07 58.2 167 26.3
Medtr4g093080 Medicago truncatula HOM05D000026 ORTHO05D000127 8.3e-07 58.2 169 31.4
Rhsim04G0012400 Rhododendron simsii HOM05D000026 ORTHO05D001292 8.3e-07 58.2 179 29.6
RcHm_v2.0_Chr2g0110301 Rosa chinensis HOM05D000026 ORTHO05D000127 8.3e-07 58.2 164 31.7
SEGI_05665 Sequoiadendron giganteum HOM05D000026 ORTHO05D000127 8.3e-07 58.2 163 28.8
Sc03g0011340 Simmondsia chinensis HOM05D000026 ORTHO05D001292 8.3e-07 58.2 159 27.7
Sc03g0011430 Simmondsia chinensis HOM05D000026 ORTHO05D001292 8.3e-07 58.2 159 27.7
COL.COLO4_09838 Corchorus olitorius HOM05D000026 ORTHO05D001292 1.1e-06 57.8 161 29.8
Dinv10338 Davidia involucrata HOM05D000026 ORTHO05D001292 1.1e-06 57.8 160 30.0
Gohir.D01G062000 Gossypium hirsutum HOM05D000026 ORTHO05D001292 1.1e-06 57.8 161 30.4
Potri.011G093700 Populus trichocarpa HOM05D000026 ORTHO05D001292 1.1e-06 57.8 167 27.5
QL05p081431 Quercus lobata HOM05D000026 ORTHO05D000127 1.1e-06 57.8 173 32.9
SEGI_33160 Sequoiadendron giganteum HOM05D000026 ORTHO05D000127 1.1e-06 57.8 167 24.6
TWI74G0586 Tripterygium wilfordii HOM05D000026 ORTHO05D001292 1.1e-06 57.8 191 32.5
Aa31LG1G21940 Aethionema arabicum HOM05D000026 ORTHO05D001292 1.4e-06 57.4 104 35.6
Dinv27010 Davidia involucrata HOM05D000026 ORTHO05D000127 1.4e-06 57.4 170 31.2
Migut.H01754 Erythranthe guttata HOM05D000026 ORTHO05D001292 1.4e-06 57.4 167 30.5
Glyma.08G065500 Glycine max HOM05D000026 ORTHO05D000127 1.4e-06 57.4 168 30.4
Lj1g0018009 Lotus japonicus HOM05D000026 ORTHO05D000127 1.4e-06 57.4 178 32.6
SEGI_16924 Sequoiadendron giganteum HOM05D000026 ORTHO05D000127 1.4e-06 57.4 79 36.7
Thecc.07G013100 Theobroma cacao HOM05D000026 ORTHO05D001292 1.4e-06 57.4 166 27.7
HPP92_028314 Vanilla planifolia HOM05D000026 ORTHO05D000127 1.4e-06 57.4 169 31.4
Actinidia35402 Actinidia chinensis HOM05D000026 ORTHO05D001292 1.9e-06 57.0 160 28.1
ATR0800G057 Amborella trichopoda HOM05D000026 ORTHO05D000127 1.9e-06 57.0 167 31.1
CSS0034131 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D000127 1.9e-06 57.0 156 31.4
ECA248G1635 Erigeron canadensis HOM05D000026 ORTHO05D001292 1.9e-06 57.0 80 37.5
Gohir.A10G228200 Gossypium hirsutum HOM05D002217 ORTHO05D002093 1.9e-06 57.0 195 27.2
Potri.001G283212 Populus trichocarpa HOM05D000026 ORTHO05D000127 1.9e-06 57.0 176 29.5
TWI38G0371 Tripterygium wilfordii HOM05D000026 ORTHO05D001292 1.9e-06 57.0 166 28.3
TAR369G0397 Trochodendron aralioides HOM05D000026 ORTHO05D001292 1.9e-06 57.0 81 43.2
Carub.0008s1618 Capsella rubella HOM05D000026 ORTHO05D001292 2.4e-06 56.6 189 28.0
Duzib132G1172 Durio zibethinus HOM05D000026 ORTHO05D000127 2.4e-06 56.6 164 32.3
FAN25G3075 Fragaria x ananassa HOM05D000026 ORTHO05D001292 2.4e-06 56.6 170 29.4
Gohir.A01G091800 Gossypium hirsutum HOM05D000026 ORTHO05D001292 2.4e-06 56.6 179 29.6
HanXRQChr11g0333331 Helianthus annuus HOM05D000026 ORTHO05D001292 2.4e-06 56.6 190 29.5
Hma1.2p1_1402F.1_g281080 Hydrangea macrophylla HOM05D000026 ORTHO05D001292 2.4e-06 56.6 160 28.1
Lj5g0002118 Lotus japonicus HOM05D000026 ORTHO05D001292 2.4e-06 56.6 187 29.9
MD15G1307500 Malus domestica HOM05D000026 ORTHO05D000127 2.4e-06 56.6 167 29.3
PSO532G0077 Papaver somniferum HOM05D000026 ORTHO05D000127 2.4e-06 56.6 195 28.2
Lsat_1_v5_gn_6_30321 Lactuca sativa HOM05D000026 ORTHO05D001292 3.2e-06 56.2 99 35.4
Sc10g0002080 Simmondsia chinensis HOM05D002217 ORTHO05D002093 3.2e-06 56.2 167 28.1
TWI14G0832 Tripterygium wilfordii HOM05D000026 ORTHO05D000127 3.2e-06 56.2 182 31.9
CARHR210220 Cardamine hirsuta HOM05D000026 ORTHO05D001292 4.1e-06 55.8 104 34.6
Dinv14306 Davidia involucrata HOM05D000026 ORTHO05D001436 4.1e-06 55.8 165 26.1
Oeu029329.1 Olea europaea HOM05D000026 ORTHO05D009413 4.1e-06 55.8 82 36.6
QL07p027523 Quercus lobata HOM05D002217 ORTHO05D002093 4.1e-06 55.8 164 29.3
SEGI_00244 Sequoiadendron giganteum HOM05D000026 ORTHO05D000127 4.1e-06 55.8 110 30.9
SEGI_38555 Sequoiadendron giganteum HOM05D000026 ORTHO05D000127 4.1e-06 55.8 194 27.3
Cpa.g.sc12.115 Carica papaya HOM05D000026 ORTHO05D001292 5.4e-06 55.5 160 28.8
Ciclev10028014m.g Citrus clementina HOM05D000026 ORTHO05D000127 5.4e-06 55.5 183 31.7
Haze_09835 Corylus avellana HOM05D000026 ORTHO05D000094 5.4e-06 55.5 77 41.6
Gohir.D10G242200 Gossypium hirsutum HOM05D002217 ORTHO05D002093 5.4e-06 55.5 195 27.2
Gorai.011G278600 Gossypium raimondii HOM05D002217 ORTHO05D002093 5.4e-06 55.5 195 27.2
Nn2g13034 Nelumbo nucifera HOM05D000026 ORTHO05D001292 5.4e-06 55.5 182 29.7
PSO532G0080 Papaver somniferum HOM05D000026 ORTHO05D000127 5.4e-06 55.5 186 30.6
PGR004G1894 Punica granatum HOM05D000026 ORTHO05D001292 5.4e-06 55.5 180 30.6
RcHm_v2.0_Chr5g0077031 Rosa chinensis HOM05D000026 ORTHO05D001292 5.4e-06 55.5 169 29.0
SEGI_20179 Sequoiadendron giganteum HOM05D000026 ORTHO05D000127 5.4e-06 55.5 177 31.1
SGA_v2.0_scaffold42G15983 Striga asiatica HOM05D000026 ORTHO05D001292 5.4e-06 55.5 168 29.2
TPR.G32333 Trifolium pratense HOM05D000026 ORTHO05D001436 5.4e-06 55.5 158 25.9
TPR.G32357 Trifolium pratense HOM05D000026 ORTHO05D001436 5.4e-06 55.5 158 25.9
TAR626G0329 Trochodendron aralioides HOM05D000026 ORTHO05D001292 5.4e-06 55.5 167 30.5
CSS0015030 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D000127 7.0e-06 55.1 156 30.8
Cfa012082 Carpinus fangiana HOM05D000026 ORTHO05D009413 7.0e-06 55.1 82 40.2
Haze_17103 Corylus avellana HOM05D000026 ORTHO05D000094 7.0e-06 55.1 77 41.6
Haze_20624 Corylus avellana HOM05D000026 ORTHO05D001292 7.0e-06 55.1 103 34.0
FvH4_3g42990 Fragaria vesca HOM05D000026 ORTHO05D001292 7.0e-06 55.1 170 28.8
Manes.07G043600 Manihot esculenta HOM05D000026 ORTHO05D000127 7.0e-06 55.1 195 28.7
Manes.10G094800 Manihot esculenta HOM05D000026 ORTHO05D000127 7.0e-06 55.1 156 29.5
Nitab4.5_0002736g0030 Nicotiana tabacum HOM05D000026 ORTHO05D001292 7.0e-06 55.1 171 28.7
PSO541G6113 Papaver somniferum HOM05D000026 ORTHO05D000127 7.0e-06 55.1 173 32.4
QL03p033194 Quercus lobata HOM05D000026 ORTHO05D000127 7.0e-06 55.1 172 30.8
TAR376G0408 Trochodendron aralioides HOM05D000026 ORTHO05D000127 7.0e-06 55.1 157 31.8
ATR0800G025 Amborella trichopoda HOM05D000026 ORTHO05D000127 9.2e-06 54.7 155 31.0
EL10Ac4g08129 Beta vulgaris HOM05D000026 ORTHO05D000127 9.2e-06 54.7 163 29.4
CAN.G128.43 Capsicum annuum HOM05D000026 ORTHO05D001436 9.2e-06 54.7 175 26.3
Cfa017525 Carpinus fangiana HOM05D000026 ORTHO05D001292 9.2e-06 54.7 103 34.0
CiPaw.01G290400 Carya illinoinensis HOM05D000026 ORTHO05D000094 9.2e-06 54.7 77 42.9
Haze_01945 Corylus avellana HOM05D000026 ORTHO05D000094 9.2e-06 54.7 82 37.8
Hma1.2p1_2829F.1_g329170 Hydrangea macrophylla HOM05D000026 ORTHO05D001292 9.2e-06 54.7 160 28.8
Lsat_1_v5_gn_7_115040 Lactuca sativa HOM05D000026 ORTHO05D001292 9.2e-06 54.7 175 29.7
QL05p081318 Quercus lobata HOM05D000026 ORTHO05D000127 9.2e-06 54.7 172 33.1


User provided reference genes

Program Settings