Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01476 Sequoiadendron giganteum HOM05D004921 ORTHO05D002858 1.9e-101 372.5 182 100.0
SEGI_30648 Sequoiadendron giganteum HOM05D004751 ORTHO05D005819 1.7e-17 93.6 59 78.0
SEGI_00052 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 8.4e-17 91.3 59 67.8
SEGI_40217 Sequoiadendron giganteum HOM05D000104 ORTHO05D006385 1.9e-16 90.1 60 68.3
SEGI_09361 Sequoiadendron giganteum HOM05D000590 ORTHO05D001713 2.1e-15 86.7 55 70.9
SEGI_09065 Sequoiadendron giganteum HOM05D000810 ORTHO05D003737 7.9e-15 84.7 59 64.4
SEGI_04627 Sequoiadendron giganteum HOM05D004921 ORTHO05D019282 3.3e-13 79.3 59 59.3
SEGI_15393 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 9.6e-13 77.8 52 69.2
SEGI_12344 Sequoiadendron giganteum HOM05D002370 ORTHO05D003878 2.1e-12 76.6 48 70.8
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 2.8e-12 76.3 48 70.8
SEGI_22445 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.8e-12 75.5 68 54.4
SEGI_16825 Sequoiadendron giganteum HOM05D003479 ORTHO05D004659 2.4e-11 73.2 49 67.3
SEGI_09521 Sequoiadendron giganteum HOM05D002125 ORTHO05D002105 9.0e-11 71.2 43 79.1
SEGI_03863 Sequoiadendron giganteum HOM05D001129 ORTHO05D019282 3.4e-10 69.3 48 64.6
SEGI_06146 Sequoiadendron giganteum HOM05D002220 ORTHO05D008182 3.4e-10 69.3 73 50.7
SEGI_09184 Sequoiadendron giganteum HOM05D000042 ORTHO05D000028 1.9e-08 63.5 47 59.6
SEGI_15947 Sequoiadendron giganteum HOM05D005116 ORTHO05D005937 3.2e-08 62.8 38 76.3
SEGI_41361 Sequoiadendron giganteum HOM05D000119 ORTHO05D383764 3.2e-08 62.8 51 54.9
HanXRQChr02g0042331 Helianthus annuus HOM05D000158 ORTHO05D000197 4.2e-08 62.4 67 46.3
HanXRQChr02g0042351 Helianthus annuus HOM05D000158 ORTHO05D000197 4.2e-08 62.4 67 46.3
Manes.17G011850 Manihot esculenta HOM05D000158 ORTHO05D000197 7.1e-08 61.6 72 43.1
TPR.G20471 Trifolium pratense HOM05D000004 ORTHO05D000002 9.3e-08 61.2 65 47.7
SEGI_29076 Sequoiadendron giganteum HOM05D004392 ORTHO05D004846 1.6e-07 60.5 46 60.9
RcHm_v2.0_Chr2g0106171 Rosa chinensis HOM05D000158 ORTHO05D000002 2.1e-07 60.1 67 43.3
ClCG03G013730 Citrullus lanatus HOM05D000158 ORTHO05D000002 2.7e-07 59.7 65 44.6
ClCG10G003450 Citrullus lanatus HOM05D000158 ORTHO05D000002 2.7e-07 59.7 65 44.6
CBR_g3934 Chara braunii HOM05D000019 ORTHO05D000002 3.5e-07 59.3 121 28.9
Manes.14G158475 Manihot esculenta HOM05D000158 ORTHO05D001651 4.6e-07 58.9 66 47.0
Lj1g0004303 Lotus japonicus HOM05D000158 ORTHO05D000197 1.0e-06 57.8 96 38.5
Manes.09G089621 Manihot esculenta HOM05D000158 ORTHO05D000002 1.0e-06 57.8 67 44.8
CBR_g3426 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-06 57.4 109 30.3
Lj2g0007285 Lotus japonicus HOM05D000158 ORTHO05D002858 1.3e-06 57.4 65 46.2
Oeu057633.1 Olea europaea HOM05D000158 ORTHO05D000197 1.3e-06 57.4 67 44.8
Lj1g0008277 Lotus japonicus HOM05D000158 ORTHO05D002858 1.8e-06 57.0 65 46.2
Lj4g0018844 Lotus japonicus HOM05D000158 ORTHO05D000197 1.8e-06 57.0 96 37.5
CBR_g30328 Chara braunii HOM05D000019 ORTHO05D000048 2.3e-06 56.6 112 31.2
CBR_g32540 Chara braunii HOM05D000019 ORTHO05D000002 2.3e-06 56.6 112 28.6
Oeu034895.1 Olea europaea HOM05D000158 ORTHO05D000002 2.3e-06 56.6 67 43.3
QL07p020245 Quercus lobata HOM05D000158 ORTHO05D000002 2.3e-06 56.6 67 43.3
TPR.G7146 Trifolium pratense HOM05D000004 ORTHO05D000002 2.3e-06 56.6 72 40.3
CBR_g22204 Chara braunii HOM05D000019 ORTHO05D000002 3.0e-06 56.2 112 30.4
Lj1g0001842 Lotus japonicus HOM05D000158 ORTHO05D002858 3.0e-06 56.2 68 45.6
Lj2g0019716 Lotus japonicus HOM05D000158 ORTHO05D000197 3.0e-06 56.2 96 37.5
Oeu006234.1 Olea europaea HOM05D000158 ORTHO05D000197 3.0e-06 56.2 67 43.3
Oeu007102.1 Olea europaea HOM05D000158 ORTHO05D010634 3.0e-06 56.2 67 43.3
CBR_g26207 Chara braunii HOM05D003550 ORTHO05D004336 3.9e-06 55.8 160 26.2
Oeu005697.1 Olea europaea HOM05D000158 ORTHO05D002858 3.9e-06 55.8 67 43.3
Oeu028306.1 Olea europaea HOM05D000158 ORTHO05D000197 3.9e-06 55.8 67 43.3
CBR_g4563 Chara braunii HOM05D000019 ORTHO05D000353 5.1e-06 55.5 112 30.4
CBR_g54859 Chara braunii HOM05D000019 ORTHO05D000353 5.1e-06 55.5 109 31.2
Lj1g0025016 Lotus japonicus HOM05D000158 ORTHO05D000197 5.1e-06 55.5 89 39.3
TPR.G1870 Trifolium pratense HOM05D000158 ORTHO05D000197 5.1e-06 55.5 72 38.9
TPR.G22593 Trifolium pratense HOM05D000158 ORTHO05D000002 5.1e-06 55.5 72 38.9
TPR.G27444 Trifolium pratense HOM05D000158 ORTHO05D002858 5.1e-06 55.5 72 38.9
TPR.G31232 Trifolium pratense HOM05D000158 ORTHO05D002858 5.1e-06 55.5 72 38.9
CBR_g3445 Chara braunii HOM05D000019 ORTHO05D000002 6.7e-06 55.1 112 30.4
Cc00_g07770 Coffea canephora HOM05D005324 ORTHO05D011089 6.7e-06 55.1 78 38.5
Oeu006971.1 Olea europaea HOM05D000004 ORTHO05D000048 6.7e-06 55.1 67 41.8
Oeu053054.1 Olea europaea HOM05D000158 ORTHO05D010634 6.7e-06 55.1 67 41.8
TPR.G315 Trifolium pratense HOM05D000158 ORTHO05D002858 6.7e-06 55.1 132 29.5
MSTRG.22449 Avicennia marina HOM05D000004 ORTHO05D000048 8.7e-06 54.7 67 43.3
CBR_g23099 Chara braunii HOM05D000019 ORTHO05D000353 8.7e-06 54.7 112 29.5
CBR_g32103 Chara braunii HOM05D000019 ORTHO05D000002 8.7e-06 54.7 112 29.5
CBR_g9226 Chara braunii HOM05D000019 ORTHO05D000002 8.7e-06 54.7 109 30.3
Oeu054588.1 Olea europaea HOM05D001522 ORTHO05D001547 8.7e-06 54.7 86 38.4
TPR.G15160 Trifolium pratense HOM05D000158 ORTHO05D002858 8.7e-06 54.7 95 33.7


User provided reference genes

Program Settings