Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01433 Sequoiadendron giganteum HOM05D017074 ORTHO05D019364 0.0e+00 1242.3 649 100.0
SEGI_31123 Sequoiadendron giganteum HOM05D017074 ORTHO05D019364 7.2e-305 1050.0 677 80.4
SEGI_09302 Sequoiadendron giganteum HOM05D017074 ORTHO05D019364 7.2e-103 379.0 464 44.4
SEGI_31688 Sequoiadendron giganteum HOM05D017074 ORTHO05D019364 4.0e-69 266.9 463 37.4
SEGI_11401 Sequoiadendron giganteum HOM05D017074 ORTHO05D019364 1.6e-49 201.8 186 53.2
SEGI_24966 Sequoiadendron giganteum HOM05D017074 ORTHO05D019364 1.3e-32 145.6 238 35.7
SEGI_07060 Sequoiadendron giganteum HOM05D017074 ORTHO05D019364 1.8e-24 118.6 200 37.5
Dinv43883 Davidia involucrata HOM05D003005 ORTHO05D004170 1.9e-15 88.6 389 24.9
TAR381G0769 Trochodendron aralioides HOM05D003005 ORTHO05D004939 1.3e-14 85.9 375 23.5
Haze_15601 Corylus avellana HOM05D003005 ORTHO05D004170 1.6e-14 85.5 382 25.1
Nn5g28167 Nelumbo nucifera HOM05D002809 ORTHO05D004939 1.6e-14 85.5 375 23.5
Pp3c14_15770 Physcomitrium patens HOM05D003005 ORTHO05D004939 1.6e-14 85.5 384 24.0
SEGI_07766 Sequoiadendron giganteum HOM05D017074 ORTHO05D019364 2.1e-14 85.1 71 54.9
Sabra14G0067600 Salix brachista HOM05D003005 ORTHO05D004170 3.7e-14 84.3 387 25.1
Cfa003849 Carpinus fangiana HOM05D003005 ORTHO05D004170 2.4e-13 81.6 382 24.6
MBI16_g09752_MAGBIO Magnolia biondii HOM05D003005 ORTHO05D017280 3.1e-13 81.3 373 27.3
Pp3c26_14690 Physcomitrium patens HOM05D004302 ORTHO05D004939 3.1e-13 81.3 370 25.1
Aqoxy7G00225 Aquilegia oxysepala HOM05D003005 ORTHO05D004170 5.3e-13 80.5 392 23.7
CiPaw.02G037400 Carya illinoinensis HOM05D003005 ORTHO05D004170 5.3e-13 80.5 388 25.0
CDE06G1895 Ceratophyllum demersum HOM05D004302 ORTHO05D007546 5.3e-13 80.5 383 23.2
Dinv32540 Davidia involucrata HOM05D003005 ORTHO05D004170 9.0e-13 79.7 389 24.2
AagrBONN_evm.TU.Sc2ySwM_228.2355 Anthoceros agrestis HOM05D002809 ORTHO05D007546 1.5e-12 79.0 390 22.6
CiPaw.01G070300 Carya illinoinensis HOM05D003005 ORTHO05D004170 1.5e-12 79.0 392 24.0
Glyma.03G254500 Glycine max HOM05D003005 ORTHO05D004170 2.0e-12 78.6 409 24.4
Phvul.006G109200 Phaseolus vulgaris HOM05D003005 ORTHO05D004170 2.0e-12 78.6 405 23.7
Mapoly0168s0028 Marchantia polymorpha HOM05D003005 ORTHO05D007546 2.6e-12 78.2 389 22.4
Pp3c26_380 Physcomitrium patens HOM05D002809 ORTHO05D007546 5.8e-12 77.0 388 23.7
VMungo0540G0655 Vigna mungo HOM05D003005 ORTHO05D004170 5.8e-12 77.0 409 23.7
AagrBONN_evm.TU.Sc2ySwM_228.3784 Anthoceros agrestis HOM05D005500 ORTHO05D006906 7.6e-12 76.6 401 23.7
Ciclev10020418m.g Citrus clementina HOM05D003005 ORTHO05D004170 1.3e-11 75.9 403 23.3
Nitab4.5_0000305g0320 Nicotiana tabacum HOM05D003005 ORTHO05D004170 1.3e-11 75.9 432 23.1
Potri.014G093200 Populus trichocarpa HOM05D003005 ORTHO05D004170 1.3e-11 75.9 391 23.8
MSTRG.20878 Avicennia marina HOM05D003005 ORTHO05D004170 1.7e-11 75.5 409 25.2
Pp3c22_13680 Physcomitrium patens HOM05D007753 ORTHO05D009385 1.7e-11 75.5 382 25.4
Mapoly0005s0140 Marchantia polymorpha HOM05D002809 ORTHO05D004563 2.2e-11 75.1 375 25.3
Nitab4.5_0004613g0080 Nicotiana tabacum HOM05D003005 ORTHO05D004170 2.2e-11 75.1 432 22.9
Prupe.2G181900 Prunus persica HOM05D003005 ORTHO05D004170 2.2e-11 75.1 390 24.4
Sabra02G0145100 Salix brachista HOM05D003005 ORTHO05D004170 2.2e-11 75.1 386 24.1
MBI07_g06328_MAGBIO Magnolia biondii HOM05D003005 ORTHO05D004170 2.9e-11 74.7 393 23.4
DCAR_005370 Daucus carota HOM05D003005 ORTHO05D004170 4.9e-11 73.9 417 25.7
Lalb_Chr18g0044251 Lupinus albus HOM05D003005 ORTHO05D004170 4.9e-11 73.9 376 23.9
SEGI_08151 Sequoiadendron giganteum HOM05D002809 ORTHO05D009091 4.9e-11 73.9 374 23.3
Sopen05g028590 Solanum pennellii HOM05D003005 ORTHO05D004170 4.9e-11 73.9 415 22.7
Glyma.19G252100 Glycine max HOM05D003005 ORTHO05D004170 6.5e-11 73.6 403 23.6
Duzib138G0864 Durio zibethinus HOM05D004302 ORTHO05D004939 8.4e-11 73.2 442 22.9
EL10Ac1g00330 Beta vulgaris HOM05D003005 ORTHO05D004170 1.1e-10 72.8 390 22.8
Hma1.2p1_0397F.1_g143750 Hydrangea macrophylla HOM05D003005 ORTHO05D004170 1.1e-10 72.8 400 24.8
PGSC0003DMG400000081 Solanum tuberosum HOM05D003005 ORTHO05D004170 1.1e-10 72.8 420 23.8
unitig_899.g14814 Utricularia gibba HOM05D003005 ORTHO05D004170 1.4e-10 72.4 417 24.5
GSVIVG01027030001 Vitis vinifera HOM05D003005 ORTHO05D004170 1.4e-10 72.4 387 23.3
ATR0584G262 Amborella trichopoda HOM05D002809 ORTHO05D017280 1.9e-10 72.0 371 23.5
Ca_23557_v3 Cicer arietinum L. HOM05D003005 ORTHO05D004170 1.9e-10 72.0 402 23.6
Peaxi162Scf01367g00003 Petunia axillaris HOM05D003005 ORTHO05D004170 1.9e-10 72.0 398 24.6
Aqoxy5G02276 Aquilegia oxysepala HOM05D002809 ORTHO05D004939 2.5e-10 71.6 415 22.4
MELO3C022055.2 Cucumis melo HOM05D004302 ORTHO05D004939 2.5e-10 71.6 420 23.1
C03p08380 Brassica napus HOM05D004302 ORTHO05D004939 3.2e-10 71.2 378 23.3
BolC3t13345H Brassica oleracea HOM05D004302 ORTHO05D004939 3.2e-10 71.2 378 23.3
CAN.G78.147 Capsicum annuum HOM05D003005 ORTHO05D004170 3.2e-10 71.2 428 22.2
SEGI_39892 Sequoiadendron giganteum HOM05D003005 ORTHO05D017280 4.2e-10 70.9 396 23.2
unitig_62.g23803 Utricularia gibba HOM05D003005 ORTHO05D004170 4.2e-10 70.9 389 23.9
SMO296G0037 Selaginella moellendorffii HOM05D003005 ORTHO05D021244 5.5e-10 70.5 328 26.2
Cc07_g04590 Coffea canephora HOM05D004302 ORTHO05D004939 7.1e-10 70.1 371 23.5
Mapoly0186s0014 Marchantia polymorpha HOM05D004302 ORTHO05D004939 7.1e-10 70.1 375 23.2
Pp3c26_600 Physcomitrium patens HOM05D003005 ORTHO05D006906 7.1e-10 70.1 403 23.3
Solyc01g095370.3 Solanum lycopersicum HOM05D003005 ORTHO05D004170 7.1e-10 70.1 408 22.3
Sopen01g039140 Solanum pennellii HOM05D003005 ORTHO05D004170 7.1e-10 70.1 408 22.5
Ah.05g180000 Amaranthus hybridus HOM05D003005 ORTHO05D004170 9.3e-10 69.7 388 22.9
MSTRG.23851 Avicennia marina HOM05D004302 ORTHO05D004939 9.3e-10 69.7 415 22.9
Dinv37565 Davidia involucrata HOM05D003005 ORTHO05D004170 9.3e-10 69.7 404 22.3
Lj3P338T13 Lonicera japonica HOM05D003005 ORTHO05D004170 9.3e-10 69.7 416 26.2
Lj3g0003098 Lotus japonicus HOM05D003005 ORTHO05D004170 9.3e-10 69.7 418 25.1
SMO174G0259 Selaginella moellendorffii HOM05D003005 ORTHO05D021244 9.3e-10 69.7 322 25.5
Potri.002G166500 Populus trichocarpa HOM05D003005 ORTHO05D004170 1.2e-09 69.3 386 23.6
TAR624G1292 Trochodendron aralioides HOM05D002809 ORTHO05D017280 1.2e-09 69.3 372 24.7
COL.COLO4_10644 Corchorus olitorius HOM05D004302 ORTHO05D004939 1.6e-09 68.9 418 23.0
CsaV3_5G038750 Cucumis sativus L. HOM05D004302 ORTHO05D004939 1.6e-09 68.9 420 22.9
Hma1.2p1_0384F.1_g140870 Hydrangea macrophylla HOM05D003005 ORTHO05D004170 1.6e-09 68.9 408 23.0
Pp3c9_6080 Physcomitrium patens HOM05D002809 ORTHO05D004563 1.6e-09 68.9 375 24.3
SMO239G0172 Selaginella moellendorffii HOM05D003005 ORTHO05D004563 1.6e-09 68.9 346 23.1
Actinidia10091 Actinidia chinensis HOM05D003005 ORTHO05D004170 2.1e-09 68.6 391 24.0
Ah.16g100910 Amaranthus hybridus HOM05D004302 ORTHO05D004939 2.1e-09 68.6 418 22.7
A03p07310 Brassica napus HOM05D004302 ORTHO05D004939 2.1e-09 68.6 378 22.8
BraA03t10054Z Brassica rapa HOM05D004302 ORTHO05D004939 2.1e-09 68.6 378 22.8
CSS0028061 Camellia sinensis var. sinensis HOM05D003005 ORTHO05D004170 2.1e-09 68.6 388 24.0
CSS0046188 Camellia sinensis var. sinensis HOM05D003005 ORTHO05D004170 2.1e-09 68.6 388 24.0
Pp3c16_10660 Physcomitrium patens HOM05D002809 ORTHO05D012113 2.1e-09 68.6 191 29.8
CANSAT64G2833 Cannabis sativa HOM05D004302 ORTHO05D004939 2.7e-09 68.2 418 22.7
ClCG11G005010 Citrullus lanatus HOM05D004302 ORTHO05D004939 2.7e-09 68.2 420 22.9
FAN05G3039 Fragaria x ananassa HOM05D004302 ORTHO05D004939 2.7e-09 68.2 232 27.2
Sc11g0008910 Simmondsia chinensis HOM05D004302 ORTHO05D004939 2.7e-09 68.2 182 29.7
THA.LOC104820986 Tarenaya hassleriana HOM05D004302 ORTHO05D004939 2.7e-09 68.2 377 22.5
AagrBONN_evm.TU.Sc2ySwM_344.3711 Anthoceros agrestis HOM05D005500 ORTHO05D006906 3.5e-09 67.8 414 20.8
FvH4_6g46160 Fragaria vesca HOM05D004302 ORTHO05D004939 4.6e-09 67.4 232 27.2
FAN14G3160 Fragaria x ananassa HOM05D004302 ORTHO05D004939 4.6e-09 67.4 232 27.2
Pp3c24_18510 Physcomitrium patens HOM05D002809 ORTHO05D004939 4.6e-09 67.4 420 22.6
Prupe.3G247500 Prunus persica HOM05D004302 ORTHO05D004939 6.0e-09 67.0 223 26.5
Lsat_1_v5_gn_4_34441 Lactuca sativa HOM05D003005 ORTHO05D004170 7.9e-09 66.6 404 22.3
SalBow5G2266 Salvia bowleyana HOM05D003005 ORTHO05D004170 7.9e-09 66.6 381 26.0
MSTRG.17309 Avicennia marina HOM05D003005 ORTHO05D004170 1.0e-08 66.2 391 23.0
AUR62022639 Chenopodium quinoa HOM05D003005 ORTHO05D004170 1.0e-08 66.2 395 22.5
FAN09G3470 Fragaria x ananassa HOM05D004302 ORTHO05D004939 1.0e-08 66.2 223 27.4
AagrBONN_evm.TU.Sc2ySwM_228.1930 Anthoceros agrestis HOM05D004302 ORTHO05D004939 1.3e-08 65.9 376 22.3
AagrBONN_evm.TU.Sc2ySwM_228.3790 Anthoceros agrestis HOM05D005500 ORTHO05D006906 1.3e-08 65.9 419 22.4
ATR0691G100 Amborella trichopoda HOM05D004302 ORTHO05D004939 1.8e-08 65.5 435 22.8
SEGI_38976 Sequoiadendron giganteum HOM05D002809 ORTHO05D004939 1.8e-08 65.5 376 21.5
Hma1.2p1_0448F.1_g154860 Hydrangea macrophylla HOM05D004302 ORTHO05D004939 2.3e-08 65.1 405 23.7
AUR62004432 Chenopodium quinoa HOM05D003005 ORTHO05D004170 3.0e-08 64.7 395 22.5
AUR62023143 Chenopodium quinoa HOM05D004302 ORTHO05D004939 3.0e-08 64.7 223 27.4
FAN02G3051 Fragaria x ananassa HOM05D004302 ORTHO05D004939 3.0e-08 64.7 232 25.4
Lalb_Chr04g0261791 Lupinus albus HOM05D003005 ORTHO05D004170 3.0e-08 64.7 404 23.3
Pp3c25_9030 Physcomitrium patens HOM05D002809 ORTHO05D004939 3.0e-08 64.7 383 23.0
Hund16684 Selenicereus undatus HOM05D003005 ORTHO05D004170 3.0e-08 64.7 375 23.2
Aa31LG11G6240 Aethionema arabicum HOM05D000171 ORTHO05D000101 3.9e-08 64.3 260 28.1
AUR62009461 Chenopodium quinoa HOM05D004302 ORTHO05D004939 3.9e-08 64.3 223 26.9
ECA234G2880 Erigeron canadensis HOM05D003005 ORTHO05D004170 3.9e-08 64.3 408 23.3
Zm00001eb433190 Zea mays HOM05D004302 ORTHO05D004939 3.9e-08 64.3 380 23.2
Ah.10g038290 Amaranthus hybridus HOM05D004302 ORTHO05D004939 5.1e-08 63.9 222 26.6
Mapoly0014s0188 Marchantia polymorpha HOM05D002809 ORTHO05D004563 5.1e-08 63.9 380 22.6
Mapoly0101s0058 Marchantia polymorpha HOM05D002809 ORTHO05D004939 6.7e-08 63.5 376 22.6
Os04g0668600 Oryza sativa ssp. japonica HOM05D004302 ORTHO05D004939 6.7e-08 63.5 377 23.6
SGA_v2.0_scaffold66G22438 Striga asiatica HOM05D000007 ORTHO05D000039 6.7e-08 63.5 196 27.0
ECA238G3553 Erigeron canadensis HOM05D004302 ORTHO05D004939 1.1e-07 62.8 230 26.1
SMO116G0409 Selaginella moellendorffii HOM05D002809 ORTHO05D004563 1.1e-07 62.8 199 26.6
Mapoly0006s0116 Marchantia polymorpha HOM05D002809 ORTHO05D010190 1.5e-07 62.4 202 27.2
PSO135G0840 Papaver somniferum HOM05D003005 ORTHO05D004170 1.5e-07 62.4 378 22.0
Sc23g0002420 Simmondsia chinensis HOM05D003005 ORTHO05D004170 1.5e-07 62.4 374 23.3
Oeu054372.1 Olea europaea HOM05D003005 ORTHO05D004170 1.9e-07 62.0 384 22.9
QL11p050679 Quercus lobata HOM05D000007 ORTHO05D000039 1.9e-07 62.0 264 25.8
AagrBONN_evm.TU.Sc2ySwM_117.2721 Anthoceros agrestis HOM05D005500 ORTHO05D006906 2.5e-07 61.6 363 24.5
AagrBONN_evm.TU.Sc2ySwM_228.4594 Anthoceros agrestis HOM05D005500 ORTHO05D006906 2.5e-07 61.6 243 24.7
FvH4_3g03990 Fragaria vesca HOM05D005977 ORTHO05D007546 2.5e-07 61.6 391 21.0
HanXRQChr16g0523861 Helianthus annuus HOM05D003005 ORTHO05D004170 2.5e-07 61.6 404 23.0
Mapoly0083s0085 Marchantia polymorpha HOM05D002809 ORTHO05D004563 3.3e-07 61.2 191 28.3
PSO384G2329 Papaver somniferum HOM05D003005 ORTHO05D004170 3.3e-07 61.2 403 22.3
SGA_v2.0_scaffold66G22390 Striga asiatica HOM05D000007 ORTHO05D000039 3.3e-07 61.2 200 28.0
Aa31LG11G6290 Aethionema arabicum HOM05D000171 ORTHO05D000101 4.3e-07 60.8 252 25.4
ECA246G1512 Erigeron canadensis HOM05D004302 ORTHO05D004939 4.3e-07 60.8 185 26.5
Zm00001eb157830 Zea mays HOM05D003005 ORTHO05D004170 4.3e-07 60.8 350 23.7
Ca_06955_v3 Cicer arietinum L. HOM05D004302 ORTHO05D004939 5.7e-07 60.5 425 23.1
Pp3c24_1980 Physcomitrium patens HOM05D003005 ORTHO05D004563 5.7e-07 60.5 383 21.1
SEGI_02103 Sequoiadendron giganteum HOM05D004302 ORTHO05D004939 5.7e-07 60.5 224 27.2
SGA_v2.0_scaffold66G22393 Striga asiatica HOM05D000007 ORTHO05D000039 5.7e-07 60.5 197 27.4
CSS0037679 Camellia sinensis var. sinensis HOM05D004302 ORTHO05D004939 7.4e-07 60.1 187 29.9
Actinidia20178 Actinidia chinensis HOM05D003005 ORTHO05D004170 9.7e-07 59.7 222 26.1
Nn1g01765 Nelumbo nucifera HOM05D003005 ORTHO05D004170 9.7e-07 59.7 390 23.3
QL09p021305 Quercus lobata HOM05D000007 ORTHO05D000039 9.7e-07 59.7 186 27.4
SMO367G0569 Selaginella moellendorffii HOM05D002809 ORTHO05D009091 9.7e-07 59.7 131 33.6
ECA240G0628 Erigeron canadensis HOM05D000007 ORTHO05D000521 1.3e-06 59.3 163 23.9
Solyc01g057190.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.3e-06 59.3 262 24.0
Duzib177G1102 Durio zibethinus HOM05D000664 ORTHO05D000491 1.6e-06 58.9 227 26.4
HanXRQChr17g0567861 Helianthus annuus HOM05D004302 ORTHO05D004939 1.6e-06 58.9 372 21.0
Lj2P385T13 Lonicera japonica HOM05D000664 ORTHO05D000491 1.6e-06 58.9 250 24.4
Mapoly0162s0014 Marchantia polymorpha HOM05D010424 ORTHO05D256530 1.6e-06 58.9 393 25.2
Psat3g208160 Pisum sativum HOM05D004302 ORTHO05D004939 1.6e-06 58.9 189 25.4
Prupe.4G117800 Prunus persica HOM05D005977 ORTHO05D007546 1.6e-06 58.9 398 21.9
SGA_v2.0_scaffold5G02619 Striga asiatica HOM05D000007 ORTHO05D000039 1.6e-06 58.9 206 27.7
Hma1.2p1_0788F.1_g218140 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 2.1e-06 58.5 207 30.0
MBI02_g01130_MAGBIO Magnolia biondii HOM05D005977 ORTHO05D007546 2.1e-06 58.5 418 23.4
SGA_v2.0_scaffold5G02610 Striga asiatica HOM05D000007 ORTHO05D000039 2.1e-06 58.5 308 25.3
Aa31LG11G6190 Aethionema arabicum HOM05D000171 ORTHO05D000101 2.8e-06 58.2 250 26.0
Duzib177G1036 Durio zibethinus HOM05D000664 ORTHO05D000491 2.8e-06 58.2 226 26.5
Peaxi162Scf00326g00061 Petunia axillaris HOM05D000007 ORTHO05D000039 2.8e-06 58.2 283 26.1
Pp3c3_5460 Physcomitrium patens HOM05D002809 ORTHO05D004563 2.8e-06 58.2 374 23.5
QL09p022619 Quercus lobata HOM05D000007 ORTHO05D000039 2.8e-06 58.2 189 28.6
RcHm_v2.0_Chr4g0398091 Rosa chinensis HOM05D000664 ORTHO05D000491 2.8e-06 58.2 199 25.6
Mapoly0002s0187 Marchantia polymorpha HOM05D002809 ORTHO05D004563 3.7e-06 57.8 223 26.5
Lj4g0007807 Lotus japonicus HOM05D000007 ORTHO05D000039 4.8e-06 57.4 187 31.0
Mapoly0033s0124 Marchantia polymorpha HOM05D004302 ORTHO05D004939 4.8e-06 57.4 191 27.2
Aa31LG11G6320 Aethionema arabicum HOM05D000171 ORTHO05D000101 6.3e-06 57.0 248 25.4
AagrBONN_evm.TU.Sc2ySwM_117.2091 Anthoceros agrestis HOM05D003005 ORTHO05D004939 6.3e-06 57.0 341 21.7
QL09p021424 Quercus lobata HOM05D000007 ORTHO05D000039 6.3e-06 57.0 191 28.3
Sabra01G0131400 Salix brachista HOM05D005977 ORTHO05D007546 6.3e-06 57.0 402 23.1
Gohir.D12G199200 Gossypium hirsutum HOM05D000664 ORTHO05D000491 8.2e-06 56.6 277 23.8
HanXRQChr07g0189351 Helianthus annuus HOM05D000171 ORTHO05D009073 8.2e-06 56.6 264 23.5
Nitab4.5_0001418g0080 Nicotiana tabacum HOM05D000007 ORTHO05D005385 8.2e-06 56.6 212 32.1
Pp3c14_9030 Physcomitrium patens HOM05D002809 ORTHO05D009385 8.2e-06 56.6 195 25.6
QL11p053716 Quercus lobata HOM05D000007 ORTHO05D000039 8.2e-06 56.6 194 25.8
SGA_v2.0_scaffold66G22388 Striga asiatica HOM05D000007 ORTHO05D000039 8.2e-06 56.6 211 28.0


User provided reference genes

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