Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01417 Sequoiadendron giganteum HOM05D002452 ORTHO05D006585 3.2e-133 478.4 239 100.0
SEGI_16031 Sequoiadendron giganteum HOM05D002452 ORTHO05D006585 1.6e-39 167.2 89 93.3
AagrBONN_evm.TU.Sc2ySwM_344.1354 Anthoceros agrestis HOM05D002452 ORTHO05D006585 1.1e-21 107.8 69 71.0
ATR0800G053 Amborella trichopoda HOM05D002452 ORTHO05D006585 1.5e-21 107.5 85 64.7
Actinidia12600 Actinidia chinensis HOM05D002452 ORTHO05D006585 1.9e-21 107.1 100 54.0
Actinidia37023 Actinidia chinensis HOM05D002452 ORTHO05D006585 1.9e-21 107.1 100 54.0
Nn3g21012 Nelumbo nucifera HOM05D002452 ORTHO05D006585 2.5e-21 106.7 103 55.3
Nn3g21014 Nelumbo nucifera HOM05D002452 ORTHO05D006585 3.3e-21 106.3 96 58.3
Ciclev10021899m.g Citrus clementina HOM05D002452 ORTHO05D006585 5.6e-21 105.5 110 50.9
Dinv13366 Davidia involucrata HOM05D002452 ORTHO05D006585 1.6e-20 104.0 96 57.3
Gohir.A13G150900 Gossypium hirsutum HOM05D002452 ORTHO05D006585 1.6e-20 104.0 68 72.1
Cpa.g.sc77.57 Carica papaya HOM05D002452 ORTHO05D006585 2.1e-20 103.6 68 72.1
CDE10G1050 Ceratophyllum demersum HOM05D002452 ORTHO05D006585 2.8e-20 103.2 68 73.5
Pp3c24_18330 Physcomitrium patens HOM05D002452 ORTHO05D006585 2.8e-20 103.2 105 52.4
Sed0027576 Sechium edule HOM05D002452 ORTHO05D006585 2.8e-20 103.2 108 53.7
Gohir.D13G155000 Gossypium hirsutum HOM05D002452 ORTHO05D006585 3.7e-20 102.8 68 70.6
Gorai.013G175400 Gossypium raimondii HOM05D002452 ORTHO05D006585 3.7e-20 102.8 68 70.6
TWI38G1964 Tripterygium wilfordii HOM05D002452 ORTHO05D006585 3.7e-20 102.8 96 56.2
CsaV3_4G032830 Cucumis sativus L. HOM05D002452 ORTHO05D006585 6.2e-20 102.1 109 52.3
TAR627G0906 Trochodendron aralioides HOM05D002452 ORTHO05D006585 6.2e-20 102.1 68 70.6
Nitab4.5_0000092g0390 Nicotiana tabacum HOM05D002452 ORTHO05D006585 8.2e-20 101.7 111 51.4
CDE10G1087 Ceratophyllum demersum HOM05D002452 ORTHO05D006585 1.1e-19 101.3 72 69.4
ClCG11G017210 Citrullus lanatus HOM05D002452 ORTHO05D006585 1.1e-19 101.3 110 52.7
Gohir.D01G038800 Gossypium hirsutum HOM05D002452 ORTHO05D006585 1.1e-19 101.3 68 69.1
Gorai.002G048000 Gossypium raimondii HOM05D002452 ORTHO05D006585 1.1e-19 101.3 68 69.1
HPP92_005570 Vanilla planifolia HOM05D002452 ORTHO05D006585 1.1e-19 101.3 99 56.6
Aqoxy1G01922 Aquilegia oxysepala HOM05D002452 ORTHO05D006585 1.4e-19 100.9 112 50.9
MELO3C025669.2 Cucumis melo HOM05D002452 ORTHO05D006585 1.4e-19 100.9 109 51.4
Nitab4.5_0004042g0010 Nicotiana tabacum HOM05D002452 ORTHO05D006585 1.4e-19 100.9 111 50.5
PSO170G5902 Papaver somniferum HOM05D002452 ORTHO05D006585 1.4e-19 100.9 114 48.2
Thecc.07G130500 Theobroma cacao HOM05D002452 ORTHO05D006585 1.4e-19 100.9 61 75.4
CAN.G375.47 Capsicum annuum HOM05D002452 ORTHO05D006585 1.8e-19 100.5 103 56.3
Cc05_g10750 Coffea canephora HOM05D002452 ORTHO05D006585 1.8e-19 100.5 103 52.4
DCAR_019610 Daucus carota HOM05D002452 ORTHO05D006585 1.8e-19 100.5 76 64.5
DCAR_019612 Daucus carota HOM05D002452 ORTHO05D006585 1.8e-19 100.5 76 64.5
Mapoly0006s0176 Marchantia polymorpha HOM05D002452 ORTHO05D006585 1.8e-19 100.5 93 49.5
GSVIVG01014101001 Vitis vinifera HOM05D002452 ORTHO05D006585 1.8e-19 100.5 68 70.6
arahy.Tifrunner.gnm1.ann1.4IG6PJ Arachis hypogaea HOM05D002452 ORTHO05D006585 2.4e-19 100.1 113 52.2
Gohir.A01G048100 Gossypium hirsutum HOM05D002452 ORTHO05D006585 2.4e-19 100.1 68 67.6
Hma1.2p1_0050F.1_g028830 Hydrangea macrophylla HOM05D002452 ORTHO05D006585 3.1e-19 99.8 111 47.7
Sopen07g030470 Solanum pennellii HOM05D002452 ORTHO05D006585 3.1e-19 99.8 103 55.3
Peaxi162Scf00000g07410 Petunia axillaris HOM05D002452 ORTHO05D006585 4.0e-19 99.4 103 52.4
Potri.001G384600 Populus trichocarpa HOM05D002452 ORTHO05D006585 4.0e-19 99.4 68 70.6
Solyc07g062190.4 Solanum lycopersicum HOM05D002452 ORTHO05D006585 4.0e-19 99.4 94 57.4
Peaxi162Scf00013g00028 Petunia axillaris HOM05D002452 ORTHO05D006585 5.3e-19 99.0 75 64.0
PGR083G1274 Punica granatum HOM05D002452 ORTHO05D006585 5.3e-19 99.0 68 70.6
QL08p024701 Quercus lobata HOM05D002452 ORTHO05D006585 5.3e-19 99.0 146 43.2
Sabra16G0253200 Salix brachista HOM05D002452 ORTHO05D006585 5.3e-19 99.0 76 64.5
Lj1A825T64 Lonicera japonica HOM05D002452 ORTHO05D006585 6.9e-19 98.6 115 48.7
Sc16g0007720 Simmondsia chinensis HOM05D002452 ORTHO05D006585 6.9e-19 98.6 101 55.4
MBI06_g08526_MAGBIO Magnolia biondii HOM05D002452 ORTHO05D006585 9.0e-19 98.2 54 83.3
Manes.15G097600 Manihot esculenta HOM05D002452 ORTHO05D006585 9.0e-19 98.2 68 69.1
PSO528G0086 Papaver somniferum HOM05D002452 ORTHO05D006585 9.0e-19 98.2 114 48.2
Pp3c8_22490 Physcomitrium patens HOM05D002452 ORTHO05D006585 9.0e-19 98.2 99 51.5
Solyc12g014390.3 Solanum lycopersicum HOM05D002452 ORTHO05D006585 9.0e-19 98.2 114 50.0
Sopen12g006160 Solanum pennellii HOM05D002452 ORTHO05D006585 9.0e-19 98.2 114 50.0
CAN.G443.1 Capsicum annuum HOM05D002452 ORTHO05D006585 1.2e-18 97.8 69 69.6
Haze_09242 Corylus avellana HOM05D002452 ORTHO05D006585 1.2e-18 97.8 68 69.1
PGSC0003DMG400007062 Solanum tuberosum HOM05D002452 ORTHO05D006585 1.2e-18 97.8 94 56.4
PGSC0003DMG400015392 Solanum tuberosum HOM05D002452 ORTHO05D006585 1.2e-18 97.8 69 66.7
Os01g0749200 Oryza sativa ssp. japonica HOM05D002452 ORTHO05D006585 1.5e-18 97.4 80 60.0
Potri.011G106100 Populus trichocarpa HOM05D002452 ORTHO05D006585 1.5e-18 97.4 150 44.0
Glyma.15G209000 Glycine max HOM05D002452 ORTHO05D006585 2.0e-18 97.1 107 52.3
Lsat_1_v5_gn_9_100460 Lactuca sativa HOM05D002452 ORTHO05D006585 2.0e-18 97.1 76 56.6
Peaxi162Scf00111g01331 Petunia axillaris HOM05D002452 ORTHO05D006585 2.0e-18 97.1 68 69.1
CANSAT56G0836 Cannabis sativa HOM05D002452 ORTHO05D006585 2.6e-18 96.7 143 42.7
HanXRQChr13g0389701 Helianthus annuus HOM05D002452 ORTHO05D006585 2.6e-18 96.7 67 67.2
Hund10438 Selenicereus undatus HOM05D002452 ORTHO05D006585 2.6e-18 96.7 104 47.1
VMungo1127G1496 Vigna mungo HOM05D002452 ORTHO05D006585 2.6e-18 96.7 53 83.0
Phvul.011G168200 Phaseolus vulgaris HOM05D002452 ORTHO05D006585 3.4e-18 96.3 106 52.8
Pp3c20_2980 Physcomitrium patens HOM05D002452 ORTHO05D006585 3.4e-18 96.3 105 49.5
AL2G39030 Arabidopsis lyrata HOM05D002452 ORTHO05D006585 4.5e-18 95.9 114 46.5
A02p22280 Brassica napus HOM05D002452 ORTHO05D006585 4.5e-18 95.9 108 50.0
BraA02t07233Z Brassica rapa HOM05D002452 ORTHO05D006585 4.5e-18 95.9 108 50.0
CSS0019439 Camellia sinensis var. sinensis HOM05D002452 ORTHO05D006585 4.5e-18 95.9 72 63.9
Lj3g0015531 Lotus japonicus HOM05D002452 ORTHO05D006585 4.5e-18 95.9 112 50.9
CARHR072150 Cardamine hirsuta HOM05D002452 ORTHO05D006585 7.6e-18 95.1 106 50.0
HanXRQChr03g0060471 Helianthus annuus HOM05D002452 ORTHO05D006585 7.6e-18 95.1 76 59.2
HanXRQChr14g0429531 Helianthus annuus HOM05D002452 ORTHO05D006585 7.6e-18 95.1 76 59.2
Prupe.4G156900 Prunus persica HOM05D002452 ORTHO05D006585 7.6e-18 95.1 118 46.6
Sed0014572 Sechium edule HOM05D002452 ORTHO05D006585 7.6e-18 95.1 106 50.9
Ah.04g164060 Amaranthus hybridus HOM05D002452 ORTHO05D006585 1.0e-17 94.7 95 51.6
THA.LOC104813996 Tarenaya hassleriana HOM05D002452 ORTHO05D006585 1.0e-17 94.7 116 45.7
Atru.chr2.2011 Acer truncatum HOM05D002452 ORTHO05D006585 1.3e-17 94.4 68 66.2
arahy.Tifrunner.gnm1.ann1.EQXZ2A Arachis hypogaea HOM05D002452 ORTHO05D006585 1.3e-17 94.4 50 86.0
BcaC08g47426 Brassica carinata HOM05D002452 ORTHO05D006585 1.3e-17 94.4 111 45.9
Migut.H02022 Erythranthe guttata HOM05D002452 ORTHO05D006585 1.3e-17 94.4 99 51.5
Eucgr.F01365 Eucalyptus grandis HOM05D002452 ORTHO05D006585 1.3e-17 94.4 68 67.6
MD03G1248000 Malus domestica HOM05D002452 ORTHO05D006585 1.7e-17 94.0 118 46.6
RcHm_v2.0_Chr5g0029571 Rosa chinensis HOM05D002452 ORTHO05D006585 1.7e-17 94.0 84 58.3
unitig_26.g9516 Utricularia gibba HOM05D001036 ORTHO05D006585 1.7e-17 94.0 118 47.5
Lalb_Chr01g0006901 Lupinus albus HOM05D002452 ORTHO05D006585 2.2e-17 93.6 53 81.1
Medtr8g054450 Medicago truncatula HOM05D002452 ORTHO05D006585 2.2e-17 93.6 98 54.1
Sp5g33720 Schrenkiella parvula HOM05D002452 ORTHO05D006585 2.2e-17 93.6 106 49.1
BcaC03g15828 Brassica carinata HOM05D002452 ORTHO05D006585 2.9e-17 93.2 108 48.1
FAN11G3657 Fragaria x ananassa HOM05D002452 ORTHO05D006585 2.9e-17 93.2 83 59.0
FAN21G2329 Fragaria x ananassa HOM05D002452 ORTHO05D006585 2.9e-17 93.2 84 58.3
FAN25G2808 Fragaria x ananassa HOM05D002452 ORTHO05D006585 2.9e-17 93.2 84 58.3
Rhsim06G0211400 Rhododendron simsii HOM05D002452 ORTHO05D006585 2.9e-17 93.2 112 45.5
TPR.G16476 Trifolium pratense HOM05D002452 ORTHO05D006585 2.9e-17 93.2 147 44.9
Aa31LG4G2330 Aethionema arabicum HOM05D002452 ORTHO05D006585 3.8e-17 92.8 106 49.1
A07p43900 Brassica napus HOM05D002452 ORTHO05D006585 3.8e-17 92.8 108 49.1
C02p35700 Brassica napus HOM05D002452 ORTHO05D006585 3.8e-17 92.8 108 49.1
FvH4_3g17780 Fragaria vesca HOM05D002452 ORTHO05D006585 3.8e-17 92.8 83 59.0
FAN16G1979 Fragaria x ananassa HOM05D002452 ORTHO05D006585 3.8e-17 92.8 83 59.0
MSTRG.14251 Avicennia marina HOM05D002452 ORTHO05D006585 4.9e-17 92.4 103 52.4
Carub.0002s2548 Capsella rubella HOM05D002452 ORTHO05D006585 4.9e-17 92.4 111 45.0
Ca_07451_v3 Cicer arietinum L. HOM05D002452 ORTHO05D006585 4.9e-17 92.4 107 50.5
ECA240G3886 Erigeron canadensis HOM05D002452 ORTHO05D006585 4.9e-17 92.4 67 61.2
Thhalv10019066m.g Eutrema salsugineum HOM05D002452 ORTHO05D006585 4.9e-17 92.4 106 48.1
BcaC08g47424 Brassica carinata HOM05D002452 ORTHO05D006585 6.5e-17 92.0 111 45.0
C06p52530 Brassica napus HOM05D002452 ORTHO05D006585 6.5e-17 92.0 111 45.0
BolC6t40272H Brassica oleracea HOM05D002452 ORTHO05D006585 6.5e-17 92.0 111 45.0
vmacro11967 Vaccinium macrocarpon HOM05D002452 ORTHO05D006585 6.5e-17 92.0 105 50.5
AT1G78630 Arabidopsis thaliana HOM05D002452 ORTHO05D006585 8.4e-17 91.7 107 48.6
CiPaw.12G110400 Carya illinoinensis HOM05D002452 ORTHO05D006585 8.4e-17 91.7 68 64.7
CBR_g88534 Chara braunii HOM05D002452 ORTHO05D006585 8.4e-17 91.7 69 59.4
Oeu058458.1 Olea europaea HOM05D002452 ORTHO05D006585 8.4e-17 91.7 88 52.3
BcaB05g25148 Brassica carinata HOM05D002452 ORTHO05D006585 1.1e-16 91.3 112 45.5
Psat4g140640 Pisum sativum HOM05D002452 ORTHO05D006585 5.5e-16 89.0 145 44.1
AUR62039507 Chenopodium quinoa HOM05D002452 ORTHO05D006585 1.6e-15 87.4 146 39.0
AUR62019642 Chenopodium quinoa HOM05D002452 ORTHO05D006585 2.1e-15 87.0 146 39.0
Oeu010028.4 Olea europaea HOM05D002452 ORTHO05D006585 4.6e-15 85.9 53 71.7
Gohir.A02G070000 Gossypium hirsutum HOM05D002452 ORTHO05D006585 1.8e-14 84.0 50 74.0
Gohir.A05G263900 Gossypium hirsutum HOM05D002452 ORTHO05D006585 6.7e-14 82.0 51 76.5
SGA_v2.0_scaffold130G34270 Striga asiatica HOM05D002452 ORTHO05D006585 6.7e-14 82.0 47 78.7
EL10Ac4g08413 Beta vulgaris HOM05D002452 ORTHO05D006585 3.3e-13 79.7 57 66.7
BcaB05g25149 Brassica carinata HOM05D002452 ORTHO05D006585 3.3e-13 79.7 46 76.1
SalBow7G3921 Salvia bowleyana HOM05D002452 ORTHO05D006585 1.2e-10 71.2 72 51.4
Cre06.g264350 Chlamydomonas reinhardtii HOM05D002452 ORTHO05D006585 3.8e-09 66.2 47 57.4
AUR62039587 Chenopodium quinoa HOM05D002452 ORTHO05D006585 1.1e-08 64.7 41 68.3


User provided reference genes

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