Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01413 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 6.0e-64 247.3 119 100.0
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 7.3e-62 240.4 119 96.6
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 1.5e-38 162.9 119 59.7
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 2.8e-37 158.7 119 58.8
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 3.7e-37 158.3 119 58.0
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 1.1e-36 156.8 119 56.3
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.1e-36 156.8 119 57.1
CSS0016052 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 5.3e-36 154.5 117 58.1
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 6.9e-36 154.1 118 58.5
CDE02G3030 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 1.2e-35 153.3 119 52.9
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 1.5e-35 152.9 119 56.3
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 2.0e-35 152.5 119 56.3
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 2.0e-35 152.5 118 52.5
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 2.6e-35 152.1 119 55.5
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 3.4e-35 151.8 119 57.1
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 4.5e-35 151.4 119 55.5
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 5.8e-35 151.0 117 55.6
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 5.8e-35 151.0 117 54.7
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 5.8e-35 151.0 117 54.7
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 7.6e-35 150.6 117 54.7
arahy.Tifrunner.gnm1.ann1.0G81PD Arachis hypogaea HOM05D000590 ORTHO05D006825 1.0e-34 150.2 119 56.3
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 1.0e-34 150.2 119 54.6
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 1.7e-34 149.4 119 56.3
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 1.7e-34 149.4 119 57.1
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 1.7e-34 149.4 119 55.5
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 1.7e-34 149.4 119 53.8
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 2.2e-34 149.1 119 58.0
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 2.2e-34 149.1 119 55.5
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 2.9e-34 148.7 119 56.3
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 2.9e-34 148.7 119 52.9
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 2.9e-34 148.7 119 55.5
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 3.8e-34 148.3 118 52.5
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 4.9e-34 147.9 119 54.6
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 4.9e-34 147.9 119 56.3
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 6.5e-34 147.5 119 52.1
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 1.9e-33 146.0 119 51.3
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 3.2e-33 145.2 119 51.3
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 4.2e-33 144.8 119 54.6
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 7.1e-33 144.1 119 53.8
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 9.3e-33 143.7 119 50.4
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 1.2e-32 143.3 119 54.6
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 2.1e-32 142.5 119 51.3
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.1e-32 142.5 119 53.8
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.7e-32 142.1 119 53.8
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.7e-32 142.1 119 52.9
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 3.5e-32 141.7 119 55.5
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 3.5e-32 141.7 119 51.3
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 3.5e-32 141.7 119 53.8
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 4.6e-32 141.4 119 52.9
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 4.6e-32 141.4 119 55.5
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 4.6e-32 141.4 119 50.4
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 6.0e-32 141.0 119 54.6
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 6.0e-32 141.0 119 54.6
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 6.0e-32 141.0 118 52.5
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 7.9e-32 140.6 119 55.5
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 7.9e-32 140.6 119 52.1
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 7.9e-32 140.6 119 52.9
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.0e-31 140.2 119 52.9
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 1.3e-31 139.8 119 51.3
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 1.3e-31 139.8 119 55.5
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 1.8e-31 139.4 119 54.6
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 2.3e-31 139.0 119 54.6
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 2.3e-31 139.0 119 54.6
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 2.3e-31 139.0 118 49.2
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 3.0e-31 138.7 119 55.5
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 3.0e-31 138.7 119 49.6
PSO063G6641 Papaver somniferum HOM05D000590 ORTHO05D006825 3.0e-31 138.7 121 51.2
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 5.1e-31 137.9 119 54.6
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 5.1e-31 137.9 119 53.8
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 6.7e-31 137.5 121 51.2
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 6.7e-31 137.5 119 52.1
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 8.7e-31 137.1 118 50.8
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 1.1e-30 136.7 119 53.8
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 1.1e-30 136.7 121 51.2
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 1.5e-30 136.3 119 53.8
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 1.5e-30 136.3 119 48.7
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 1.5e-30 136.3 119 48.7
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 2.5e-30 135.6 119 51.3
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 9.6e-30 133.7 119 53.8
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 9.6e-30 133.7 119 52.1
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 1.3e-29 133.3 119 49.6
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 2.8e-29 132.1 118 50.8
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 3.7e-29 131.7 119 51.3
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 3.7e-29 131.7 119 52.1
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 1.1e-28 130.2 119 49.6
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 1.4e-28 129.8 120 50.8
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 1.8e-28 129.4 119 47.9
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 1.8e-28 129.4 119 51.3
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 1.8e-28 129.4 117 50.4
Sc26g0000670 Simmondsia chinensis HOM05D000590 ORTHO05D006825 2.0e-27 125.9 119 45.4
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 2.6e-27 125.6 120 48.3
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.6e-27 125.6 108 51.9
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 1.1e-25 120.2 118 46.6
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 4.2e-25 118.2 91 54.9
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 2.1e-24 115.9 137 40.9
CBR_g71803 Chara braunii HOM05D000590 ORTHO05D006825 3.5e-24 115.2 120 46.7
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 6.1e-24 114.4 119 47.9
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 6.1e-24 114.4 119 47.9
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 6.1e-24 114.4 92 54.3
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 3.0e-23 112.1 92 51.1
CBR_g49078 Chara braunii HOM05D000590 ORTHO05D006825 3.9e-23 111.7 120 45.0
SMO200G0118 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 3.9e-23 111.7 121 43.8
Ah.05g179600 Amaranthus hybridus HOM05D000590 ORTHO05D006825 1.9e-22 109.4 95 47.4
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 1.9e-22 109.4 121 43.0
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 4.8e-21 104.8 91 52.7
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 4.8e-21 104.8 91 51.6
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 4.8e-21 104.8 91 51.6
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 4.8e-21 104.8 91 52.7
AT3G62500 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 6.3e-21 104.4 91 51.6
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 8.2e-21 104.0 91 49.5
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 1.2e-19 100.1 117 41.9
A04p00950 Brassica napus HOM05D000590 ORTHO05D006825 1.2e-19 100.1 113 43.4
AagrBONN_evm.TU.Sc2ySwM_344.2724 Anthoceros agrestis HOM05D000590 ORTHO05D006825 1.5e-19 99.8 91 47.3
Mapoly0251s0003 Marchantia polymorpha HOM05D000590 ORTHO05D006825 3.8e-18 95.1 120 38.3
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 3.8e-18 95.1 147 37.4
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 5.0e-18 94.7 91 44.0
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 6.5e-18 94.4 111 38.7
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 2.5e-17 92.4 91 42.9
arahy.Tifrunner.gnm1.ann1.06LZL4 Arachis hypogaea HOM05D000590 ORTHO05D006825 3.2e-17 92.0 62 61.3
ClCG06G001200 Citrullus lanatus HOM05D000590 ORTHO05D006825 3.3e-14 82.0 119 37.0
Os01g0219200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006825 2.2e-13 79.3 120 35.0
SHI13291 Sapria himalayana HOM05D000590 ORTHO05D006825 2.6e-11 72.4 63 50.8
arahy.Tifrunner.gnm1.ann1.AM6JUY Arachis hypogaea HOM05D000590 ORTHO05D006825 9.4e-09 63.9 63 50.8
Rhsim02G0230200 Rhododendron simsii HOM05D000590 ORTHO05D006825 2.7e-08 62.4 64 45.3
Carub.0005s2847 Capsella rubella HOM05D000590 ORTHO05D006825 3.6e-08 62.0 55 50.9
Glyma.07G056100 Glycine max HOM05D000590 ORTHO05D006825 3.3e-06 55.5 55 43.6


User provided reference genes

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