Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 5.7e-77 290.8 143 100.0
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 1.4e-30 136.7 119 54.6
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 1.8e-30 136.3 107 60.7
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 3.0e-30 135.6 109 58.7
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 4.0e-30 135.2 107 57.9
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 2.0e-29 132.9 108 55.6
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 2.6e-29 132.5 123 50.4
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 4.4e-29 131.7 109 57.8
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 4.4e-29 131.7 123 51.2
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 9.8e-29 130.6 109 56.9
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 1.7e-28 129.8 109 55.0
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 2.2e-28 129.4 101 57.4
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 2.2e-28 129.4 109 56.0
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 2.2e-28 129.4 109 57.8
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 2.9e-28 129.0 104 55.8
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 3.7e-28 128.6 104 56.7
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 4.9e-28 128.3 109 56.0
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 6.4e-28 127.9 109 56.0
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 8.3e-28 127.5 109 54.1
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 8.3e-28 127.5 109 54.1
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 8.3e-28 127.5 109 53.2
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 8.3e-28 127.5 109 56.0
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 1.4e-27 126.7 109 54.1
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 1.8e-27 126.3 104 53.8
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 2.4e-27 125.9 108 52.8
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 3.2e-27 125.6 108 57.4
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 5.4e-27 124.8 108 55.6
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 1.2e-26 123.6 106 51.9
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 1.6e-26 123.2 119 48.7
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 1.6e-26 123.2 106 55.7
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 1.6e-26 123.2 104 54.8
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 2.7e-26 122.5 105 52.4
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 3.5e-26 122.1 104 53.8
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 3.5e-26 122.1 104 55.8
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 4.6e-26 121.7 104 53.8
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.0e-25 120.6 109 51.4
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 1.3e-25 120.2 102 55.9
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 1.7e-25 119.8 104 52.9
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 2.3e-25 119.4 109 50.5
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 5.0e-25 118.2 104 50.0
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 1.5e-24 116.7 107 50.5
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.5e-24 116.7 101 50.5
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 4.3e-24 115.2 104 51.0
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 7.3e-24 114.4 110 50.0
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 1.6e-23 113.2 115 49.6
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 2.1e-23 112.8 148 42.6
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 8.0e-23 110.9 109 48.6
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 1.4e-22 110.2 109 46.8
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 3.1e-22 109.0 124 41.9
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 4.0e-22 108.6 111 47.7
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 8.9e-22 107.5 109 47.7
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 1.2e-21 107.1 109 51.4
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 2.0e-21 106.3 124 41.1
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 2.0e-21 106.3 109 49.5
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 4.4e-21 105.1 104 49.0
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 5.8e-21 104.8 104 46.2
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 7.5e-21 104.4 187 33.2
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 7.5e-21 104.4 109 45.0
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.3e-20 103.6 187 33.2
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 4.9e-20 101.7 100 46.0
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 6.4e-20 101.3 84 57.1
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 2.4e-19 99.4 107 43.9
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 3.2e-19 99.0 104 44.2
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 3.2e-19 99.0 104 46.2
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 3.2e-19 99.0 104 46.2
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 5.4e-19 98.2 80 51.2
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 9.2e-19 97.4 104 44.2
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 9.2e-19 97.4 104 46.2
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 9.2e-19 97.4 186 33.3
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 1.2e-18 97.1 91 48.4
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 1.6e-18 96.7 107 43.0
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 7.3e-16 87.8 84 51.2
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 6.8e-14 81.3 59 61.0
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 1.5e-13 80.1 62 56.5
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 2.9e-12 75.9 79 44.3
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 1.6e-10 70.1 53 56.6
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 3.5e-10 68.9 58 56.9
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 7.8e-10 67.8 59 52.5
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 4.7e-07 58.5 108 32.4
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 3.1e-06 55.8 50 52.0


User provided reference genes

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