Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01273 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 0.0e+00 1595.5 1048 100.0
SEGI_30451 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 1.2e-184 651.4 911 65.9
ATR0598G202 Amborella trichopoda HOM05D003722 ORTHO05D004589 2.4e-180 637.1 872 66.7
Phvul.009G081900 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 2.0e-171 607.4 906 63.4
Potri.018G048700 Populus trichocarpa HOM05D003722 ORTHO05D004589 2.2e-170 604.0 887 59.9
HanXRQChr09g0261801 Helianthus annuus HOM05D003722 ORTHO05D004589 7.1e-169 599.0 832 56.9
Medtr1g015450 Medicago truncatula HOM05D003722 ORTHO05D004589 3.0e-167 593.6 871 62.6
TAR624G1180 Trochodendron aralioides HOM05D003722 ORTHO05D004589 1.5e-166 591.3 872 63.2
Potri.006G220900 Populus trichocarpa HOM05D003722 ORTHO05D004589 1.9e-166 590.9 892 63.5
Manes.16G085600 Manihot esculenta HOM05D003722 ORTHO05D004589 1.4e-164 584.7 823 66.8
GSVIVG01035469001 Vitis vinifera HOM05D003722 ORTHO05D004589 1.8e-164 584.3 831 61.4
Sabra18G0046400 Salix brachista HOM05D003722 ORTHO05D004589 3.1e-164 583.6 886 57.8
TPR.G38933 Trifolium pratense HOM05D003722 ORTHO05D004589 6.9e-164 582.4 852 63.0
TWI32G0253 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 1.2e-163 581.6 821 64.1
TAR636G3697 Trochodendron aralioides HOM05D003722 ORTHO05D004589 1.5e-163 581.3 881 56.9
Prupe.1G404200 Prunus persica HOM05D003722 ORTHO05D004589 7.6e-163 578.9 888 58.2
MD15G1049900 Malus domestica HOM05D003722 ORTHO05D004589 1.7e-162 577.8 886 60.3
arahy.Tifrunner.gnm1.ann1.JX1TK4 Arachis hypogaea HOM05D003722 ORTHO05D004589 3.8e-162 576.6 826 65.5
Sc23g0004200 Simmondsia chinensis HOM05D003722 ORTHO05D004589 1.4e-161 574.7 855 64.0
Lj5g0007526 Lotus japonicus HOM05D003722 ORTHO05D004589 2.5e-161 573.9 826 66.1
MBI19_g11832_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 1.2e-160 571.6 887 63.1
Ca_13110_v3 Cicer arietinum L. HOM05D003722 ORTHO05D004589 2.7e-160 570.5 817 65.0
Glyma.14G098900 Glycine max HOM05D003722 ORTHO05D004589 1.3e-159 568.2 825 65.2
Dinv02138 Davidia involucrata HOM05D003722 ORTHO05D004589 3.9e-159 566.6 860 57.2
Nitab4.5_0000446g0200 Nicotiana tabacum HOM05D003722 ORTHO05D004589 3.9e-159 566.6 837 58.9
PSO724G0454 Papaver somniferum HOM05D003722 ORTHO05D004589 3.3e-158 563.5 816 65.6
arahy.Tifrunner.gnm1.ann1.G8USHK Arachis hypogaea HOM05D003722 ORTHO05D004589 4.3e-158 563.1 826 65.1
Manes.03G053433 Manihot esculenta HOM05D003722 ORTHO05D004589 4.3e-158 563.1 871 62.8
VMungo1309G1038 Vigna mungo HOM05D003722 ORTHO05D004589 7.4e-158 562.4 865 62.8
Glyma.06G055800 Glycine max HOM05D003722 ORTHO05D004589 9.7e-158 562.0 887 60.0
MD08G1071300 Malus domestica HOM05D003722 ORTHO05D004589 2.2e-157 560.8 902 61.1
Nn6g35614 Nelumbo nucifera HOM05D003722 ORTHO05D004589 2.2e-157 560.8 837 64.8
QL02p017002 Quercus lobata HOM05D003722 ORTHO05D004589 2.2e-157 560.8 863 63.2
Migut.E01781 Erythranthe guttata HOM05D003722 ORTHO05D004589 3.7e-157 560.1 830 64.8
PSO135G0299 Papaver somniferum HOM05D003722 ORTHO05D004589 3.7e-157 560.1 818 63.8
Glyma.17G225800 Glycine max HOM05D003722 ORTHO05D004589 4.8e-157 559.7 823 65.2
Aqoxy7G04082 Aquilegia oxysepala HOM05D003722 ORTHO05D004589 6.3e-157 559.3 862 63.3
CsaV3_4G036040 Cucumis sativus L. HOM05D003722 ORTHO05D004589 6.9e-156 555.8 836 65.0
VMungo0647G1341 Vigna mungo HOM05D003722 ORTHO05D004589 6.9e-156 555.8 823 64.2
Sabra06G0170700 Salix brachista HOM05D003722 ORTHO05D004589 1.5e-155 554.7 983 56.0
Hma1.2p1_0836F.1_g225970 Hydrangea macrophylla HOM05D003722 ORTHO05D004589 2.6e-155 553.9 887 62.2
CSS0048906 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 5.9e-155 552.7 814 64.5
Lalb_Chr22g0356231 Lupinus albus HOM05D003722 ORTHO05D004589 1.3e-154 551.6 826 64.5
Lsat_1_v5_gn_8_70661 Lactuca sativa HOM05D003722 ORTHO05D004589 1.7e-154 551.2 813 61.1
MSTRG.25985 Avicennia marina HOM05D003722 ORTHO05D004589 2.9e-154 550.4 836 63.2
RcHm_v2.0_Chr6g0311801 Rosa chinensis HOM05D003722 ORTHO05D004589 3.8e-154 550.1 888 56.4
TAR626G0824 Trochodendron aralioides HOM05D003722 ORTHO05D004589 3.8e-154 550.1 826 65.3
Eucgr.C03158 Eucalyptus grandis HOM05D003722 ORTHO05D004589 5.0e-154 549.7 887 61.3
Oeu036060.1 Olea europaea HOM05D003722 ORTHO05D004589 8.5e-154 548.9 820 62.7
Glyma.04G055700 Glycine max HOM05D003722 ORTHO05D004589 1.4e-153 548.1 891 59.0
Nn8g38669 Nelumbo nucifera HOM05D003722 ORTHO05D004589 1.4e-153 548.1 879 62.3
Gohir.D07G019500 Gossypium hirsutum HOM05D003722 ORTHO05D004589 1.9e-153 547.7 869 61.7
Mapoly0202s0013 Marchantia polymorpha HOM05D003722 ORTHO05D004589 1.9e-153 547.7 965 54.4
FvH4_2g30970 Fragaria vesca HOM05D003722 ORTHO05D004589 2.5e-153 547.4 888 61.1
FAN24G1820 Fragaria x ananassa HOM05D003722 ORTHO05D004589 3.2e-153 547.0 888 61.1
Dinv41842 Davidia involucrata HOM05D003722 ORTHO05D004589 4.2e-153 546.6 857 62.7
TAR626G0360 Trochodendron aralioides HOM05D003722 ORTHO05D004589 4.2e-153 546.6 871 62.9
Gohir.A07G019700 Gossypium hirsutum HOM05D003722 ORTHO05D004589 2.1e-152 544.3 869 61.4
Thecc.09G063300 Theobroma cacao HOM05D003722 ORTHO05D004589 2.1e-152 544.3 820 63.9
CSS0013734 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 2.7e-152 543.9 830 64.1
Haze_18293 Corylus avellana HOM05D003722 ORTHO05D004589 3.6e-152 543.5 887 59.1
TWI34G0168 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 6.1e-152 542.7 821 63.5
Rhsim03G0063100 Rhododendron simsii HOM05D003722 ORTHO05D004589 7.9e-152 542.3 804 64.9
FAN27G2597 Fragaria x ananassa HOM05D003722 ORTHO05D004589 1.8e-151 541.2 899 52.5
Ciclev10007327m.g Citrus clementina HOM05D003722 ORTHO05D004589 5.1e-151 539.7 892 60.9
Nitab4.5_0002831g0060 Nicotiana tabacum HOM05D003722 ORTHO05D004589 5.1e-151 539.7 858 59.2
ClCG05G015740 Citrullus lanatus HOM05D003722 ORTHO05D004589 2.0e-150 537.7 819 64.6
PGSC0003DMG400018806 Solanum tuberosum HOM05D003722 ORTHO05D004589 3.3e-150 537.0 854 59.4
FAN20G0071 Fragaria x ananassa HOM05D003722 ORTHO05D004589 4.3e-150 536.6 888 60.8
Migut.A00079 Erythranthe guttata HOM05D003722 ORTHO05D004589 5.7e-150 536.2 835 64.0
Solyc08g061820.3 Solanum lycopersicum HOM05D003722 ORTHO05D004589 9.7e-150 535.4 813 59.0
ECA236G0039 Erigeron canadensis HOM05D003722 ORTHO05D004589 3.7e-149 533.5 812 62.9
arahy.Tifrunner.gnm1.ann1.V9GZ7C Arachis hypogaea HOM05D003722 ORTHO05D004589 4.8e-149 533.1 829 63.9
Sopen08g017250 Solanum pennellii HOM05D003722 ORTHO05D004589 4.8e-149 533.1 813 58.9
Gorai.001G020200 Gossypium raimondii HOM05D003722 ORTHO05D004589 8.2e-149 532.3 869 60.8
arahy.Tifrunner.gnm1.ann1.V7LPDI Arachis hypogaea HOM05D003722 ORTHO05D004589 1.8e-148 531.2 829 61.6
DCAR_004379 Daucus carota HOM05D003722 ORTHO05D004589 2.4e-148 530.8 821 63.7
Lalb_Chr23g0267971 Lupinus albus HOM05D003722 ORTHO05D004589 2.4e-148 530.8 824 55.1
PGR044G0665 Punica granatum HOM05D003722 ORTHO05D004589 4.1e-148 530.0 825 64.4
Sed0027838 Sechium edule HOM05D003722 ORTHO05D004589 4.1e-148 530.0 805 65.5
COL.COLO4_21138 Corchorus olitorius HOM05D003722 ORTHO05D004589 5.3e-148 529.6 820 63.3
Duzib187G0791 Durio zibethinus HOM05D003722 ORTHO05D004589 1.5e-147 528.1 868 61.4
Pp3c5_23900 Physcomitrium patens HOM05D003722 ORTHO05D004589 3.4e-147 526.9 934 53.4
Peaxi162Scf00486g01029 Petunia axillaris HOM05D003722 ORTHO05D004589 4.5e-147 526.6 920 55.9
Phvul.001G038700 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 2.9e-146 523.9 823 62.2
Actinidia27552 Actinidia chinensis HOM05D003722 ORTHO05D004589 1.4e-145 521.5 814 61.8
DCAR_001223 Daucus carota HOM05D003722 ORTHO05D004589 1.9e-145 521.2 810 65.2
vmacro07490 Vaccinium macrocarpon HOM05D003722 ORTHO05D004589 2.5e-145 520.8 792 61.5
SGA_v2.0_scaffold163G37999 Striga asiatica HOM05D003722 ORTHO05D004589 2.7e-144 517.3 854 61.5
Lj7A221G29 Lonicera japonica HOM05D003722 ORTHO05D004589 4.7e-144 516.5 805 55.9
EL10Ac2g03782 Beta vulgaris HOM05D003722 ORTHO05D004589 1.4e-143 515.0 810 59.3
HanXRQChr03g0065591 Helianthus annuus HOM05D003722 ORTHO05D004589 1.4e-143 515.0 837 61.3
Pp3c12_17410 Physcomitrium patens HOM05D003722 ORTHO05D004589 2.3e-143 514.2 903 50.3
CiPaw.15G091900 Carya illinoinensis HOM05D003722 ORTHO05D004589 5.1e-143 513.1 824 57.3
AT4G33210 Arabidopsis thaliana HOM05D003722 ORTHO05D004589 2.6e-142 510.8 815 62.0
CAN.G881.1 Capsicum annuum HOM05D003722 ORTHO05D004589 4.4e-142 510.0 777 61.3
HanXRQChr05g0135941 Helianthus annuus HOM05D003722 ORTHO05D004589 1.3e-141 508.4 813 56.6
SGA_v2.0_scaffold64G21877 Striga asiatica HOM05D003722 ORTHO05D004589 1.4e-140 505.0 838 61.3
Pp3c4_12360 Physcomitrium patens HOM05D003722 ORTHO05D004589 1.8e-140 504.6 913 58.6
SalBow4G2891 Salvia bowleyana HOM05D003722 ORTHO05D004589 1.8e-140 504.6 813 62.6
Lalb_Chr08g0244821 Lupinus albus HOM05D003722 ORTHO05D004589 2.4e-140 504.2 825 59.4
CANSAT25G1471 Cannabis sativa HOM05D003722 ORTHO05D004589 5.3e-140 503.1 868 59.6
AUR62009080 Chenopodium quinoa HOM05D003722 ORTHO05D004589 5.0e-138 496.5 820 57.6
AUR62020586 Chenopodium quinoa HOM05D003722 ORTHO05D004589 1.6e-136 491.5 808 60.9
SMO238G0031 Selaginella moellendorffii HOM05D003722 ORTHO05D004589 1.6e-136 491.5 800 56.4
THA.LOC104803705 Tarenaya hassleriana HOM05D003722 ORTHO05D004589 1.6e-136 491.5 874 55.7
BraA08t33724Z Brassica rapa HOM05D003722 ORTHO05D004589 2.7e-136 490.7 804 56.5
Atru.chr7.1848 Acer truncatum HOM05D003722 ORTHO05D004589 4.7e-136 490.0 737 63.4
C03p86790 Brassica napus HOM05D003722 ORTHO05D004589 8.0e-136 489.2 804 56.6
BraA03t15228Z Brassica rapa HOM05D003722 ORTHO05D004589 1.8e-135 488.0 815 60.6
Sed0000287 Sechium edule HOM05D003722 ORTHO05D004589 1.8e-135 488.0 720 64.0
Sp7g30950 Schrenkiella parvula HOM05D003722 ORTHO05D004589 4.0e-135 486.9 803 61.3
BcaC01g01002 Brassica carinata HOM05D003722 ORTHO05D004589 2.0e-134 484.6 804 56.0
BolC3t20973H Brassica oleracea HOM05D003722 ORTHO05D004589 2.0e-134 484.6 804 56.0
Carub.0007s0725 Capsella rubella HOM05D003722 ORTHO05D004589 8.2e-133 479.2 813 60.6
SGA_v2.0_scaffold169G38713 Striga asiatica HOM05D003722 ORTHO05D004589 1.4e-132 478.4 803 59.8
Aa31sc290G30 Aethionema arabicum HOM05D003722 ORTHO05D004589 9.1e-132 475.7 876 57.8
Medtr1g015480 Medicago truncatula HOM05D003722 ORTHO05D004589 1.6e-131 474.9 799 57.4
Duzib168G1968 Durio zibethinus HOM05D003722 ORTHO05D004589 2.0e-131 474.6 869 53.7
unitig_748.g8237 Utricularia gibba HOM05D003722 ORTHO05D004589 2.0e-131 474.6 821 62.4
BcaNung02160 Brassica carinata HOM05D003722 ORTHO05D004589 1.0e-130 472.2 819 60.2
Gohir.D06G083100 Gossypium hirsutum HOM05D003722 ORTHO05D004589 1.7e-130 471.5 797 60.2
BcaB03g12811 Brassica carinata HOM05D003722 ORTHO05D004589 5.0e-130 469.9 808 56.2
HPP92_006154 Vanilla planifolia HOM05D003722 ORTHO05D004589 1.9e-129 468.0 861 56.8
BolC7t46400H Brassica oleracea HOM05D003722 ORTHO05D004589 2.5e-129 467.6 815 60.2
Pp3c6_6070 Physcomitrium patens HOM05D003722 ORTHO05D004589 2.5e-129 467.6 1006 47.4
AL7G18350 Arabidopsis lyrata HOM05D003722 ORTHO05D004589 3.2e-129 467.2 874 57.6
BraA01t00479Z Brassica rapa HOM05D003722 ORTHO05D004589 1.2e-128 465.3 819 60.3
CARHR241240 Cardamine hirsuta HOM05D003722 ORTHO05D004589 4.7e-128 463.4 944 54.3
C01p05420 Brassica napus HOM05D003722 ORTHO05D004589 6.1e-128 463.0 819 60.2
BolC1t00522H Brassica oleracea HOM05D003722 ORTHO05D004589 6.1e-128 463.0 819 60.2
A01p04970 Brassica napus HOM05D003722 ORTHO05D004589 8.0e-128 462.6 872 57.9
Thhalv10024312m.g Eutrema salsugineum HOM05D003722 ORTHO05D004589 4.0e-127 460.3 872 57.5
BcaC09g52132 Brassica carinata HOM05D003722 ORTHO05D004589 1.2e-126 458.8 809 60.3
MELO3C016912.2 Cucumis melo HOM05D003722 ORTHO05D004589 3.1e-124 450.7 795 53.1
BolC3t20974H Brassica oleracea HOM05D003722 ORTHO05D004589 6.5e-122 443.0 809 54.6
Psat6g022880 Pisum sativum HOM05D003722 ORTHO05D004589 4.2e-121 440.3 897 48.9
A08p17740 Brassica napus HOM05D003722 ORTHO05D004589 7.2e-121 439.5 804 55.1
A08p17750 Brassica napus HOM05D003722 ORTHO05D004589 3.6e-120 437.2 808 54.1
BraA08t33725Z Brassica rapa HOM05D003722 ORTHO05D004589 8.0e-120 436.0 808 54.3
C03p86800 Brassica napus HOM05D003722 ORTHO05D004589 1.2e-115 422.2 807 53.7
Hund19422 Selenicereus undatus HOM05D003722 ORTHO05D004589 1.2e-115 422.2 743 51.8
Gorai.010G096600 Gossypium raimondii HOM05D003722 ORTHO05D004589 4.5e-115 420.2 752 55.3
TWI39G1239 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 2.5e-113 414.5 742 55.9
CDE07G1686 Ceratophyllum demersum HOM05D003722 ORTHO05D004589 1.4e-111 408.7 767 56.1
CiPaw.16G068500 Carya illinoinensis HOM05D003722 ORTHO05D004589 6.8e-111 406.4 695 62.7
CBR_g11995 Chara braunii HOM05D003722 ORTHO05D004589 1.2e-110 405.6 930 49.7
unitig_4.g30332 Utricularia gibba HOM05D003722 ORTHO05D004589 1.4e-108 398.7 803 45.6
Gohir.A06G081600 Gossypium hirsutum HOM05D003722 ORTHO05D004589 3.2e-108 397.5 692 58.2
Cpa.g.sc126.25 Carica papaya HOM05D003722 ORTHO05D004589 3.3e-105 387.5 688 63.5
AagrBONN_evm.TU.Sc2ySwM_117.2463 Anthoceros agrestis HOM05D003722 ORTHO05D004589 3.1e-95 354.4 614 62.4
MBI13_g31962_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 1.6e-91 342.0 644 55.0
Zm00001eb048660 Zea mays HOM05D003722 ORTHO05D004589 4.3e-89 334.0 481 49.7
Actinidia25690 Actinidia chinensis HOM05D003722 ORTHO05D004589 3.1e-87 327.8 656 62.7
Os10g0396400 Oryza sativa ssp. japonica HOM05D003722 ORTHO05D004589 5.4e-84 317.0 649 55.0
SalBow1G2799 Salvia bowleyana HOM05D003722 ORTHO05D004589 1.2e-80 305.8 649 64.4
Oeu022303.1 Olea europaea HOM05D003722 ORTHO05D004589 2.0e-78 298.5 297 54.5
Sc09g0010110 Simmondsia chinensis HOM05D003722 ORTHO05D004589 2.6e-78 298.1 664 51.7
MBI13_g13882_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 2.9e-77 294.7 381 55.9
Zm00001eb223490 Zea mays HOM05D003722 ORTHO05D004589 4.2e-76 290.8 408 50.2
SHI18847 Sapria himalayana HOM05D000105 ORTHO05D000023 9.9e-70 269.6 437 47.8
Cc08_g01170 Coffea canephora HOM05D003722 ORTHO05D004589 4.6e-67 260.8 441 58.0
Cc08_g01160 Coffea canephora HOM05D003722 ORTHO05D004589 4.0e-63 247.7 273 59.0
Psat3g079480 Pisum sativum HOM05D003722 ORTHO05D004589 2.8e-48 198.4 140 69.3
Oeu028128.1 Olea europaea HOM05D003722 ORTHO05D004589 3.1e-47 194.9 312 67.9
Ah.11g044300 Amaranthus hybridus HOM05D003722 ORTHO05D004589 5.1e-42 177.6 227 45.8
VMungo0720G2633 Vigna mungo HOM05D003722 ORTHO05D004589 2.7e-27 128.6 88 72.7
Psat5g213240 Pisum sativum HOM05D003722 ORTHO05D004589 3.7e-24 118.2 79 69.6
VMungo0251G0605 Vigna mungo HOM05D003722 ORTHO05D001926 1.4e-23 116.3 121 53.7
Actinidia25691 Actinidia chinensis HOM05D003722 ORTHO05D004589 3.1e-23 115.2 115 48.7
Gohir.A06G081780 Gossypium hirsutum HOM05D003722 ORTHO05D004589 5.5e-20 104.4 93 48.4
Cpa.g.sc126.26 Carica papaya HOM05D003722 ORTHO05D004589 1.3e-16 93.2 79 57.0
ECA236G4568 Erigeron canadensis HOM05D000007 ORTHO05D000039 4.5e-14 84.7 63 66.7
Cre12.g525600 Chlamydomonas reinhardtii HOM05D003722 ORTHO05D004589 1.6e-11 76.3 200 31.5
Mapoly0101s0054 Marchantia polymorpha HOM05D003722 ORTHO05D004589 1.8e-10 72.8 65 49.2
SEGI_24121 Sequoiadendron giganteum HOM05D000038 ORTHO05D000689 6.3e-08 64.3 53 69.8
SalBow1G8614 Salvia bowleyana HOM05D003722 ORTHO05D050768 1.1e-07 63.5 237 65.4
Psat5g114640 Pisum sativum HOM05D003722 ORTHO05D004589 7.0e-07 60.8 196 27.0
AL6G49050 Arabidopsis lyrata HOM05D000710 ORTHO05D000336 3.5e-06 58.5 120 35.8


User provided reference genes

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