Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01253 Sequoiadendron giganteum HOM05D025414 ORTHO05D002944 5.3e-170 600.9 295 100.0
SEGI_23880 Sequoiadendron giganteum HOM05D025414 ORTHO05D002944 3.1e-21 106.7 153 38.6
SMO147G0426 Selaginella moellendorffii HOM05D025414 ORTHO05D036674 9.1e-13 78.6 69 55.1
Aqoxy1G03185 Aquilegia oxysepala HOM05D004563 ORTHO05D002944 1.3e-11 74.7 108 40.7
HanXRQChr17g0557991 Helianthus annuus HOM05D004563 ORTHO05D002944 2.9e-11 73.6 81 45.7
MBI07_g21399_MAGBIO Magnolia biondii HOM05D004563 ORTHO05D002944 2.9e-11 73.6 163 35.0
Prupe.4G170200 Prunus persica HOM05D008023 ORTHO05D002944 5.0e-11 72.8 130 36.9
TAR624G1329 Trochodendron aralioides HOM05D004563 ORTHO05D002944 5.0e-11 72.8 67 50.7
Lsat_1_v5_gn_8_140081 Lactuca sativa HOM05D004563 ORTHO05D002944 6.5e-11 72.4 91 40.7
Duzib235G1377 Durio zibethinus HOM05D004563 ORTHO05D002944 8.5e-11 72.0 72 48.6
Manes.13G138000 Manihot esculenta HOM05D004563 ORTHO05D002944 2.5e-10 70.5 92 41.3
Dinv03911 Davidia involucrata HOM05D004563 ORTHO05D002944 3.2e-10 70.1 102 34.3
Mapoly0024s0071 Marchantia polymorpha HOM05D025414 ORTHO05D036674 3.2e-10 70.1 77 45.5
ClCG02G017950 Citrullus lanatus HOM05D004563 ORTHO05D002944 4.2e-10 69.7 93 38.7
ClCG11G017550 Citrullus lanatus HOM05D008023 ORTHO05D002944 7.2e-10 68.9 67 47.8
CsaV3_4G033230 Cucumis sativus L. HOM05D008023 ORTHO05D010897 7.2e-10 68.9 67 49.3
CSS0006802 Camellia sinensis var. sinensis HOM05D004563 ORTHO05D002944 9.4e-10 68.6 101 36.6
CiPaw.04G131700 Carya illinoinensis HOM05D004563 ORTHO05D002944 9.4e-10 68.6 150 32.0
MELO3C025631.2 Cucumis melo HOM05D008023 ORTHO05D002944 9.4e-10 68.6 60 55.0
Sed0020403 Sechium edule HOM05D004563 ORTHO05D002944 1.2e-09 68.2 125 35.2
Sed0004710 Sechium edule HOM05D004563 ORTHO05D002944 2.1e-09 67.4 121 33.1
TWI59G1400 Tripterygium wilfordii HOM05D004563 ORTHO05D002944 2.1e-09 67.4 160 29.4
MBI06_g25989_MAGBIO Magnolia biondii HOM05D004563 ORTHO05D002944 2.7e-09 67.0 139 34.5
Sp4g13600 Schrenkiella parvula HOM05D004563 ORTHO05D002944 2.7e-09 67.0 59 49.2
SEGI_28032 Sequoiadendron giganteum HOM05D004042 ORTHO05D004552 2.7e-09 67.0 78 51.3
AL4G26310 Arabidopsis lyrata HOM05D004563 ORTHO05D002944 3.6e-09 66.6 59 49.2
MELO3C019761.2 Cucumis melo HOM05D004563 ORTHO05D002944 3.6e-09 66.6 87 39.1
CsaV3_6G018840 Cucumis sativus L. HOM05D004563 ORTHO05D002944 3.6e-09 66.6 87 39.1
Atru.chr6.2814 Acer truncatum HOM05D004563 ORTHO05D002944 4.7e-09 66.2 67 47.8
Carub.0004s1239 Capsella rubella HOM05D004563 ORTHO05D002944 4.7e-09 66.2 59 49.2
CARHR124710 Cardamine hirsuta HOM05D004563 ORTHO05D002944 4.7e-09 66.2 60 48.3
Dinv40663 Davidia involucrata HOM05D014353 ORTHO05D002944 4.7e-09 66.2 140 32.1
Gorai.010G159000 Gossypium raimondii HOM05D004563 ORTHO05D002944 4.7e-09 66.2 62 48.4
CiPaw.11G162800 Carya illinoinensis HOM05D008023 ORTHO05D002944 6.1e-09 65.9 82 41.5
COL.COLO4_31315 Corchorus olitorius HOM05D005057 ORTHO05D006570 8.0e-09 65.5 94 37.2
BcaB06g28418 Brassica carinata HOM05D004563 ORTHO05D002944 1.0e-08 65.1 59 45.8
Cfa019590 Carpinus fangiana HOM05D008023 ORTHO05D002944 1.0e-08 65.1 80 41.2
Ciclev10015391m.g Citrus clementina HOM05D004563 ORTHO05D002944 1.0e-08 65.1 89 39.3
PSO675G1487 Papaver somniferum HOM05D004563 ORTHO05D002944 1.0e-08 65.1 81 39.5
AT2G31130 Arabidopsis thaliana HOM05D004563 ORTHO05D002944 1.4e-08 64.7 59 47.5
Haze_13348 Corylus avellana HOM05D004563 ORTHO05D002944 1.4e-08 64.7 88 39.8
Thecc.07G105200 Theobroma cacao HOM05D008023 ORTHO05D002944 1.4e-08 64.7 89 43.8
TAR626G0367 Trochodendron aralioides HOM05D004563 ORTHO05D002944 1.4e-08 64.7 132 30.3
vmacro12368 Vaccinium macrocarpon HOM05D004563 ORTHO05D002944 1.4e-08 64.7 96 34.4
GSVIVG01014227001 Vitis vinifera HOM05D008023 ORTHO05D002944 1.4e-08 64.7 59 50.8
Dinv15459 Davidia involucrata HOM05D004563 ORTHO05D002944 1.8e-08 64.3 204 27.5
Eucgr.A01904 Eucalyptus grandis HOM05D004563 ORTHO05D002944 1.8e-08 64.3 98 36.7
PGSC0003DMG400020429 Solanum tuberosum HOM05D004563 ORTHO05D002944 1.8e-08 64.3 88 36.4
MSTRG.14316 Avicennia marina HOM05D004563 ORTHO05D002944 2.3e-08 63.9 135 31.1
Haze_09349 Corylus avellana HOM05D008023 ORTHO05D002944 2.3e-08 63.9 82 40.2
PGR042G0272 Punica granatum HOM05D004563 ORTHO05D002944 2.3e-08 63.9 98 35.7
ATR0602G009 Amborella trichopoda HOM05D004563 ORTHO05D002944 3.0e-08 63.5 81 40.7
Dinv14971 Davidia involucrata HOM05D000845 ORTHO05D003813 3.0e-08 63.5 112 34.8
Gohir.D10G032200 Gossypium hirsutum HOM05D004563 ORTHO05D002944 3.0e-08 63.5 103 32.0
Sopen07g027280 Solanum pennellii HOM05D004563 ORTHO05D002944 3.0e-08 63.5 88 36.4
A04p23880 Brassica napus HOM05D004563 ORTHO05D002944 4.0e-08 63.2 59 47.5
BraA04t17911Z Brassica rapa HOM05D004563 ORTHO05D002944 4.0e-08 63.2 59 47.5
Dinv04617 Davidia involucrata HOM05D000845 ORTHO05D003813 4.0e-08 63.2 110 36.4
QL08p041398 Quercus lobata HOM05D004563 ORTHO05D002944 4.0e-08 63.2 71 40.8
BcaB02g10364 Brassica carinata HOM05D004563 ORTHO05D002944 5.2e-08 62.8 59 45.8
AUR62038995 Chenopodium quinoa HOM05D007922 ORTHO05D009490 5.2e-08 62.8 118 36.4
Migut.M00253 Erythranthe guttata HOM05D004563 ORTHO05D002944 5.2e-08 62.8 123 32.5
Gohir.A10G031400 Gossypium hirsutum HOM05D004563 ORTHO05D002944 5.2e-08 62.8 103 32.0
Lj3g0000357 Lotus japonicus HOM05D004563 ORTHO05D002944 5.2e-08 62.8 104 30.8
Sed0024688 Sechium edule HOM05D008023 ORTHO05D002944 5.2e-08 62.8 59 50.8
Thhalv10016698m.g Eutrema salsugineum HOM05D004563 ORTHO05D002944 6.8e-08 62.4 59 45.8
Gorai.011G033900 Gossypium raimondii HOM05D004563 ORTHO05D002944 6.8e-08 62.4 103 31.1
Nitab4.5_0009762g0030 Nicotiana tabacum HOM05D014572 ORTHO05D016880 6.8e-08 62.4 89 36.0
Phvul.005G096100 Phaseolus vulgaris HOM05D004563 ORTHO05D002944 6.8e-08 62.4 75 42.7
Solyc07g053320.4 Solanum lycopersicum HOM05D004563 ORTHO05D002944 6.8e-08 62.4 88 35.2
CSS0035750 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 8.8e-08 62.0 59 45.8
CSS0041377 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 8.8e-08 62.0 59 45.8
Gohir.D06G136800 Gossypium hirsutum HOM05D004563 ORTHO05D002944 8.8e-08 62.0 222 27.0
Mapoly0027s0039 Marchantia polymorpha HOM05D025414 ORTHO05D036674 8.8e-08 62.0 67 43.3
Nn1g09097 Nelumbo nucifera HOM05D004563 ORTHO05D002944 8.8e-08 62.0 70 41.4
Nitab4.5_0003322g0040 Nicotiana tabacum HOM05D014572 ORTHO05D016880 8.8e-08 62.0 61 45.9
Prupe.3G122900 Prunus persica HOM05D004563 ORTHO05D002944 8.8e-08 62.0 94 38.3
RcHm_v2.0_Chr5g0031461 Rosa chinensis HOM05D008023 ORTHO05D002944 8.8e-08 62.0 145 31.7
THA.LOC104800862 Tarenaya hassleriana HOM05D004563 ORTHO05D002944 8.8e-08 62.0 58 48.3
CAN.G370.64 Capsicum annuum HOM05D014572 ORTHO05D016880 1.2e-07 61.6 141 29.1
MD11G1259700 Malus domestica HOM05D008023 ORTHO05D002944 1.2e-07 61.6 114 36.8
BcaC02g11198 Brassica carinata HOM05D004563 ORTHO05D002944 1.5e-07 61.2 59 44.1
C04p19350 Brassica napus HOM05D004563 ORTHO05D002944 1.5e-07 61.2 59 44.1
BolC4t23467H Brassica oleracea HOM05D004563 ORTHO05D002944 1.5e-07 61.2 59 44.1
CSS0022203 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 1.5e-07 61.2 96 38.5
CANSAT64G2099 Cannabis sativa HOM05D004563 ORTHO05D002944 1.5e-07 61.2 61 42.6
Lj1A833T49 Lonicera japonica HOM05D008023 ORTHO05D002944 1.5e-07 61.2 60 48.3
Oeu032703.1 Olea europaea HOM05D004563 ORTHO05D002944 1.5e-07 61.2 71 43.7
Rhsim04G0073900 Rhododendron simsii HOM05D004563 ORTHO05D002944 1.5e-07 61.2 64 43.8
Actinidia11133 Actinidia chinensis HOM05D004563 ORTHO05D002944 2.0e-07 60.8 102 34.3
AUR62038920 Chenopodium quinoa HOM05D004563 ORTHO05D002944 2.0e-07 60.8 103 39.8
Nitab4.5_0003827g0050 Nicotiana tabacum HOM05D004563 ORTHO05D002944 2.0e-07 60.8 99 32.3
Peaxi162Scf00469g00139 Petunia axillaris HOM05D004563 ORTHO05D002944 2.0e-07 60.8 175 25.7
Rhsim04G0024700 Rhododendron simsii HOM05D008023 ORTHO05D002944 2.0e-07 60.8 59 49.2
THA.LOC104800859 Tarenaya hassleriana HOM05D004563 ORTHO05D002944 2.0e-07 60.8 59 45.8
vmacro09501 Vaccinium macrocarpon HOM05D008023 ORTHO05D002944 2.0e-07 60.8 67 43.3
CSS0038794 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 2.6e-07 60.5 59 44.1
FAN16G2995 Fragaria x ananassa HOM05D008023 ORTHO05D002944 2.6e-07 60.5 157 30.6
Nitab4.5_0010797g0050 Nicotiana tabacum HOM05D004563 ORTHO05D002944 2.6e-07 60.5 93 34.4
Actinidia10974 Actinidia chinensis HOM05D004563 ORTHO05D002944 3.4e-07 60.1 103 33.0
BcaC01g05977 Brassica carinata HOM05D004563 ORTHO05D002944 3.4e-07 60.1 76 35.5
Cc05_g11360 Coffea canephora HOM05D008023 ORTHO05D002944 3.4e-07 60.1 62 45.2
FvH4_3g18640 Fragaria vesca HOM05D008023 ORTHO05D002944 3.4e-07 60.1 157 30.6
FAN11G0626 Fragaria x ananassa HOM05D008023 ORTHO05D002944 3.4e-07 60.1 157 30.6
FAN25G1709 Fragaria x ananassa HOM05D008023 ORTHO05D002944 3.4e-07 60.1 157 28.7
Thecc.06G172300 Theobroma cacao HOM05D004563 ORTHO05D002944 3.4e-07 60.1 110 37.3
arahy.Tifrunner.gnm1.ann1.65XND6 Arachis hypogaea HOM05D004563 ORTHO05D002944 4.4e-07 59.7 59 44.1
Glyma.18G179200 Glycine max HOM05D004563 ORTHO05D002944 4.4e-07 59.7 67 38.8
Rhsim06G0133100 Rhododendron simsii HOM05D004563 ORTHO05D002944 4.4e-07 59.7 99 30.3
Hund07832 Selenicereus undatus HOM05D004563 ORTHO05D002944 4.4e-07 59.7 92 39.1
Aa31LG5G5790 Aethionema arabicum HOM05D004563 ORTHO05D002944 5.7e-07 59.3 96 33.3
CiPaw.12G114700 Carya illinoinensis HOM05D008023 ORTHO05D002944 5.7e-07 59.3 181 27.6
COL.COLO4_17605 Corchorus olitorius HOM05D008023 ORTHO05D002944 5.7e-07 59.3 60 46.7
MD17G1232800 Malus domestica HOM05D004563 ORTHO05D002944 5.7e-07 59.3 96 37.5
BcaB01g04062 Brassica carinata HOM05D004563 ORTHO05D002944 7.5e-07 58.9 71 39.4
BraA05t20385Z Brassica rapa HOM05D004563 ORTHO05D002944 7.5e-07 58.9 59 42.4
CSS0015057 Camellia sinensis var. sinensis HOM05D004563 ORTHO05D002944 7.5e-07 58.9 102 34.3
FAN21G3564 Fragaria x ananassa HOM05D008023 ORTHO05D002944 7.5e-07 58.9 111 34.2
Lalb_Chr03g0029881 Lupinus albus HOM05D004563 ORTHO05D002944 7.5e-07 58.9 154 28.6
Oeu051114.4 Olea europaea HOM05D008023 ORTHO05D002944 7.5e-07 58.9 67 40.3
A05p14540 Brassica napus HOM05D004563 ORTHO05D002944 9.8e-07 58.5 59 42.4
Sabra16G0248200 Salix brachista HOM05D008023 ORTHO05D002944 9.8e-07 58.5 68 39.7
SEGI_19649 Sequoiadendron giganteum HOM05D005202 ORTHO05D006256 9.8e-07 58.5 53 54.7
VMungo1080G1187 Vigna mungo HOM05D002364 ORTHO05D002540 9.8e-07 58.5 70 41.4
EL10Ac9g20912 Beta vulgaris HOM05D004563 ORTHO05D002944 1.3e-06 58.2 61 42.6
Duzib147G1211 Durio zibethinus HOM05D004563 ORTHO05D002944 1.3e-06 58.2 58 44.8
Glyma.12G122400 Glycine max HOM05D004563 ORTHO05D002944 1.3e-06 58.2 60 41.7
MD09G1239700 Malus domestica HOM05D004563 ORTHO05D002944 1.3e-06 58.2 99 35.4
QL08p026875 Quercus lobata HOM05D008023 ORTHO05D002944 1.3e-06 58.2 187 27.3
Thecc.01G148500 Theobroma cacao HOM05D004563 ORTHO05D002944 1.3e-06 58.2 135 29.6
Duzib213G0674 Durio zibethinus HOM05D008023 ORTHO05D002944 1.7e-06 57.8 117 35.9
FAN05G5668 Fragaria x ananassa HOM05D004563 ORTHO05D002944 1.7e-06 57.8 62 41.9
FAN09G1171 Fragaria x ananassa HOM05D004563 ORTHO05D002944 1.7e-06 57.8 62 41.9
PSO541G0319 Papaver somniferum HOM05D004563 ORTHO05D002944 1.7e-06 57.8 244 26.2
Potri.001G376800 Populus trichocarpa HOM05D008023 ORTHO05D002944 1.7e-06 57.8 66 39.4
RcHm_v2.0_Chr2g0128481 Rosa chinensis HOM05D004563 ORTHO05D002944 1.7e-06 57.8 63 39.7
RcHm_v2.0_Chr2g0129081 Rosa chinensis HOM05D004563 ORTHO05D002944 1.7e-06 57.8 63 39.7
SGA_v2.0_scaffold9G04806 Striga asiatica HOM05D004563 ORTHO05D002944 1.7e-06 57.8 67 40.3
GSVIVG01020684001 Vitis vinifera HOM05D004563 ORTHO05D002944 1.7e-06 57.8 95 34.7
CAN.G162.20 Capsicum annuum HOM05D018586 ORTHO05D002944 2.2e-06 57.4 57 47.4
SalBow7G0314 Salvia bowleyana HOM05D004563 ORTHO05D002944 2.2e-06 57.4 158 29.7
Actinidia18792 Actinidia chinensis HOM05D008023 ORTHO05D002944 2.8e-06 57.0 98 32.7
arahy.Tifrunner.gnm1.ann1.P6YWRU Arachis hypogaea HOM05D004563 ORTHO05D002944 2.8e-06 57.0 87 36.8
MSTRG.14955 Avicennia marina HOM05D008023 ORTHO05D002944 2.8e-06 57.0 64 40.6
C03p20530 Brassica napus HOM05D004563 ORTHO05D002944 2.8e-06 57.0 69 37.7
Duzib170G0431 Durio zibethinus HOM05D008023 ORTHO05D002944 2.8e-06 57.0 189 31.2
FAN02G0553 Fragaria x ananassa HOM05D004563 ORTHO05D002944 2.8e-06 57.0 62 41.9
Lalb_Chr14g0367401 Lupinus albus HOM05D004563 ORTHO05D002944 2.8e-06 57.0 129 30.2
Psat7g166160 Pisum sativum HOM05D004563 ORTHO05D002944 2.8e-06 57.0 64 34.4
PGSC0003DMG400012394 Solanum tuberosum HOM05D018586 ORTHO05D002944 2.8e-06 57.0 89 37.1
TWI39G0037 Tripterygium wilfordii HOM05D008023 ORTHO05D002944 2.8e-06 57.0 153 26.1
VMungo1127G0722 Vigna mungo HOM05D008023 ORTHO05D002944 2.8e-06 57.0 109 33.0
arahy.Tifrunner.gnm1.ann1.B2LHN7 Arachis hypogaea HOM05D004563 ORTHO05D002944 3.7e-06 56.6 60 36.7
A03p17400 Brassica napus HOM05D004563 ORTHO05D002944 3.7e-06 56.6 69 37.7
BraA03t11011Z Brassica rapa HOM05D004563 ORTHO05D002944 3.7e-06 56.6 69 37.7
Ca_18892_v3 Cicer arietinum L. HOM05D004563 ORTHO05D002944 3.7e-06 56.6 59 37.3
Ca_23071_v3 Cicer arietinum L. HOM05D008023 ORTHO05D002944 3.7e-06 56.6 59 44.1
Cc02_g14720 Coffea canephora HOM05D014572 ORTHO05D016880 3.7e-06 56.6 92 35.9
FvH4_6g27121 Fragaria vesca HOM05D004563 ORTHO05D002944 3.7e-06 56.6 58 43.1
FAN14G3451 Fragaria x ananassa HOM05D004563 ORTHO05D002944 3.7e-06 56.6 58 43.1
Gohir.A11G287000 Gossypium hirsutum HOM05D008023 ORTHO05D002944 3.7e-06 56.6 88 37.5
Solyc07g062640.3 Solanum lycopersicum HOM05D018586 ORTHO05D002944 3.7e-06 56.6 146 30.1
Sabra13G0099900 Salix brachista HOM05D004563 ORTHO05D002944 4.8e-06 56.2 94 36.2
Sc21g0003700 Simmondsia chinensis HOM05D004563 ORTHO05D002944 4.8e-06 56.2 59 42.4
arahy.Tifrunner.gnm1.ann1.47XKI7 Arachis hypogaea HOM05D004563 ORTHO05D002944 6.3e-06 55.8 97 32.0
Ca_01462_v3 Cicer arietinum L. HOM05D004563 ORTHO05D002944 6.3e-06 55.8 63 41.3
FAN09G4605 Fragaria x ananassa HOM05D004563 ORTHO05D002944 6.3e-06 55.8 58 43.1
Lj3g0023253 Lotus japonicus HOM05D004563 ORTHO05D002944 6.3e-06 55.8 68 39.7
Medtr4g079720 Medicago truncatula HOM05D004563 ORTHO05D002944 6.3e-06 55.8 63 33.3
Potri.013G118000 Populus trichocarpa HOM05D004563 ORTHO05D002944 6.3e-06 55.8 77 40.3
SalBow7G0936 Salvia bowleyana HOM05D004563 ORTHO05D002944 6.3e-06 55.8 62 41.9
BolC3t14433H Brassica oleracea HOM05D004563 ORTHO05D002944 8.3e-06 55.5 69 36.2
Gorai.007G325900 Gossypium raimondii HOM05D008023 ORTHO05D002944 8.3e-06 55.5 81 38.3
Lalb_Chr19g0134931 Lupinus albus HOM05D004563 ORTHO05D002944 8.3e-06 55.5 61 39.3


User provided reference genes

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