Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01246 Sequoiadendron giganteum HOM05D001582 ORTHO05D384708 2.7e-208 728.4 357 100.0
SEGI_22375 Sequoiadendron giganteum HOM05D001582 ORTHO05D001598 7.1e-169 597.4 303 97.0
SEGI_14701 Sequoiadendron giganteum HOM05D001582 ORTHO05D001598 1.7e-106 390.2 281 69.0
SEGI_02876 Sequoiadendron giganteum HOM05D001582 ORTHO05D011374 1.5e-102 377.1 267 68.9
SEGI_41398 Sequoiadendron giganteum HOM05D001582 ORTHO05D001598 1.4e-52 211.1 115 87.8
SEGI_39700 Sequoiadendron giganteum HOM05D001582 ORTHO05D001598 2.4e-52 210.3 113 88.5
SEGI_00950 Sequoiadendron giganteum HOM05D001582 ORTHO05D004409 2.5e-25 120.6 108 60.2
SEGI_06085 Sequoiadendron giganteum HOM05D001582 ORTHO05D001598 7.4e-25 119.0 81 74.1
SEGI_07542 Sequoiadendron giganteum HOM05D004881 ORTHO05D001598 1.3e-24 118.2 120 45.0
SEGI_12995 Sequoiadendron giganteum HOM05D004881 ORTHO05D383853 1.2e-22 111.7 121 43.0
SEGI_08963 Sequoiadendron giganteum HOM05D004881 ORTHO05D001598 1.5e-22 111.3 148 35.8
SEGI_04918 Sequoiadendron giganteum HOM05D004881 ORTHO05D001598 1.1e-20 105.1 133 37.6
SEGI_13498 Sequoiadendron giganteum HOM05D001582 ORTHO05D001598 1.4e-20 104.8 58 84.5
SEGI_17441 Sequoiadendron giganteum HOM05D004881 ORTHO05D385534 4.2e-20 103.2 163 33.7
SEGI_09743 Sequoiadendron giganteum HOM05D000070 ORTHO05D000722 3.9e-18 96.7 134 35.1
SEGI_00312 Sequoiadendron giganteum HOM05D001582 ORTHO05D000239 8.7e-18 95.5 78 62.8
SEGI_13308 Sequoiadendron giganteum HOM05D000070 ORTHO05D383856 1.1e-17 95.1 215 27.9
SEGI_06215 Sequoiadendron giganteum HOM05D000182 ORTHO05D000112 2.5e-17 94.0 52 80.8
SEGI_19111 Sequoiadendron giganteum HOM05D001582 ORTHO05D001598 2.5e-17 94.0 137 36.5
SEGI_33943 Sequoiadendron giganteum HOM05D004881 ORTHO05D386952 3.8e-13 80.1 258 24.0
SEGI_15266 Sequoiadendron giganteum HOM05D004881 ORTHO05D384445 8.5e-13 79.0 279 22.9
SEGI_29626 Sequoiadendron giganteum HOM05D001582 ORTHO05D011374 2.5e-12 77.4 118 39.8
SEGI_19588 Sequoiadendron giganteum HOM05D004881 ORTHO05D385630 3.2e-12 77.0 153 30.7
SEGI_14858 Sequoiadendron giganteum HOM05D004881 ORTHO05D384084 9.3e-12 75.5 274 23.4
PSO384G2272 Papaver somniferum HOM05D001582 ORTHO05D001598 1.6e-11 74.7 130 28.5
SEGI_08942 Sequoiadendron giganteum HOM05D001582 ORTHO05D011374 2.1e-11 74.3 133 36.1
SEGI_10271 Sequoiadendron giganteum HOM05D004881 ORTHO05D386356 2.7e-11 73.9 216 25.9
SEGI_31541 Sequoiadendron giganteum HOM05D001582 ORTHO05D001598 2.7e-11 73.9 133 36.8
SEGI_04679 Sequoiadendron giganteum HOM05D004881 ORTHO05D001598 3.6e-11 73.6 276 22.8
SEGI_01407 Sequoiadendron giganteum HOM05D004881 ORTHO05D383916 4.6e-11 73.2 215 24.7
SEGI_20765 Sequoiadendron giganteum HOM05D004881 ORTHO05D386915 4.6e-11 73.2 215 24.7
PSO339G0691 Papaver somniferum HOM05D001582 ORTHO05D001598 1.8e-10 71.2 130 27.7
SEGI_12189 Sequoiadendron giganteum HOM05D004881 ORTHO05D385298 2.3e-10 70.9 275 22.9
PSO170G3843 Papaver somniferum HOM05D001582 ORTHO05D001598 3.0e-10 70.5 130 27.7
PSO407G0098 Papaver somniferum HOM05D001582 ORTHO05D001598 3.0e-10 70.5 130 26.9
SEGI_04940 Sequoiadendron giganteum HOM05D001582 ORTHO05D011374 3.9e-10 70.1 109 39.4
SEGI_31287 Sequoiadendron giganteum HOM05D004881 ORTHO05D385086 5.1e-10 69.7 51 54.9
MD14G1040800 Malus domestica HOM05D001582 ORTHO05D001598 6.7e-10 69.3 130 26.9
PGR119G1303 Punica granatum HOM05D001582 ORTHO05D001598 8.8e-10 68.9 130 27.7
SEGI_10858 Sequoiadendron giganteum HOM05D001428 ORTHO05D001306 8.8e-10 68.9 194 25.8
Cpa.g.sc90.38 Carica papaya HOM05D001582 ORTHO05D001598 1.5e-09 68.2 130 27.7
SEGI_26653 Sequoiadendron giganteum HOM05D001582 ORTHO05D001598 1.5e-09 68.2 130 30.0
Ciclev10000430m.g Citrus clementina HOM05D001582 ORTHO05D001598 1.9e-09 67.8 130 26.2
Dinv24365 Davidia involucrata HOM05D001582 ORTHO05D001598 1.9e-09 67.8 130 30.0
SEGI_15064 Sequoiadendron giganteum HOM05D004881 ORTHO05D001598 1.9e-09 67.8 256 24.2
GSVIVG01035741001 Vitis vinifera HOM05D001582 ORTHO05D001598 2.5e-09 67.4 130 32.3
CAN.G1609.12 Capsicum annuum HOM05D001582 ORTHO05D001598 3.3e-09 67.0 129 29.5
Sabra07G0086800 Salix brachista HOM05D001582 ORTHO05D001598 3.3e-09 67.0 106 31.1
SEGI_28255 Sequoiadendron giganteum HOM05D004881 ORTHO05D001598 4.3e-09 66.6 92 32.6
Nn3g16145 Nelumbo nucifera HOM05D001582 ORTHO05D001598 5.7e-09 66.2 130 26.9
Nn3g17061 Nelumbo nucifera HOM05D001582 ORTHO05D001598 5.7e-09 66.2 130 26.9
TPR.G25039 Trifolium pratense HOM05D001582 ORTHO05D001598 5.7e-09 66.2 130 26.2
GSVIVG01026479001 Vitis vinifera HOM05D001582 ORTHO05D001598 5.7e-09 66.2 130 29.2
Eucgr.I00201 Eucalyptus grandis HOM05D001582 ORTHO05D001598 7.4e-09 65.9 130 26.9
Rhsim01G0228400 Rhododendron simsii HOM05D001582 ORTHO05D001598 7.4e-09 65.9 123 28.5
Thecc.09G143200 Theobroma cacao HOM05D001582 ORTHO05D001598 7.4e-09 65.9 144 29.9
Sabra06G0192300 Salix brachista HOM05D001582 ORTHO05D001598 9.7e-09 65.5 144 29.2
Atru.chr7.2314 Acer truncatum HOM05D001582 ORTHO05D001598 1.7e-08 64.7 144 28.5
Aqoxy7G03556 Aquilegia oxysepala HOM05D001582 ORTHO05D001598 1.7e-08 64.7 130 26.9
Dinv07121 Davidia involucrata HOM05D001582 ORTHO05D001598 2.2e-08 64.3 130 28.5
Migut.A00263 Erythranthe guttata HOM05D001582 ORTHO05D001598 2.2e-08 64.3 130 29.2
QL12p031079 Quercus lobata HOM05D001582 ORTHO05D001598 2.2e-08 64.3 130 30.0
Cfa002896 Carpinus fangiana HOM05D001582 ORTHO05D001598 2.8e-08 63.9 130 26.9
Gorai.010G054400 Gossypium raimondii HOM05D001582 ORTHO05D001598 2.8e-08 63.9 130 30.8
ATR0796G278 Amborella trichopoda HOM05D001582 ORTHO05D001598 4.8e-08 63.2 130 27.7
ATR1120G129 Amborella trichopoda HOM05D001582 ORTHO05D001598 6.3e-08 62.8 130 29.2
CANSAT25G0823 Cannabis sativa HOM05D001582 ORTHO05D001598 6.3e-08 62.8 144 27.8
SEGI_29080 Sequoiadendron giganteum HOM05D004881 ORTHO05D001598 6.3e-08 62.8 79 38.0
Atru.chr4.904 Acer truncatum HOM05D001582 ORTHO05D001598 8.2e-08 62.4 130 25.4
Actinidia15715 Actinidia chinensis HOM05D001582 ORTHO05D001598 8.2e-08 62.4 130 29.2
CDE02G2653 Ceratophyllum demersum HOM05D001582 ORTHO05D001598 8.2e-08 62.4 130 27.7
Gohir.A06G048600 Gossypium hirsutum HOM05D001582 ORTHO05D001598 8.2e-08 62.4 130 30.0
SEGI_34024 Sequoiadendron giganteum HOM05D001582 ORTHO05D011374 8.2e-08 62.4 85 40.0
vmacro12797 Vaccinium macrocarpon HOM05D001582 ORTHO05D001598 8.2e-08 62.4 106 29.2
CDE02G0448 Ceratophyllum demersum HOM05D001582 ORTHO05D001598 1.1e-07 62.0 130 27.7
Cc01_g06560 Coffea canephora HOM05D001582 ORTHO05D001598 1.1e-07 62.0 141 28.4
Nitab4.5_0024546g0010 Nicotiana tabacum HOM05D001582 ORTHO05D001598 1.1e-07 62.0 130 26.9
Prupe.7G172200 Prunus persica HOM05D001582 ORTHO05D001598 1.1e-07 62.0 130 25.4
PGR044G0381 Punica granatum HOM05D001582 ORTHO05D001598 1.1e-07 62.0 130 30.0
Sopen04g005100 Solanum pennellii HOM05D001582 ORTHO05D001598 1.1e-07 62.0 130 28.5
TAR628G1543 Trochodendron aralioides HOM05D001582 ORTHO05D001598 1.1e-07 62.0 130 26.2
CSS0043942 Camellia sinensis var. sinensis HOM05D001582 ORTHO05D001598 1.4e-07 61.6 130 29.2
Hma1.2p1_0476F.1_g160800 Hydrangea macrophylla HOM05D001582 ORTHO05D001598 1.8e-07 61.2 137 26.3
Manes.16G068800 Manihot esculenta HOM05D001582 ORTHO05D001598 1.8e-07 61.2 144 27.8
Potri.006G245800 Populus trichocarpa HOM05D001582 ORTHO05D001598 1.8e-07 61.2 130 27.7
Solyc04g009970.4 Solanum lycopersicum HOM05D001582 ORTHO05D001598 1.8e-07 61.2 130 28.5
Ca_24117_v3 Cicer arietinum L. HOM05D001582 ORTHO05D001598 2.4e-07 60.8 130 26.2
Mapoly0083s0021 Marchantia polymorpha HOM05D001582 ORTHO05D001598 2.4e-07 60.8 137 29.2
COL.COLO4_24075 Corchorus olitorius HOM05D001582 ORTHO05D001598 3.1e-07 60.5 141 27.0
Gohir.D06G048433 Gossypium hirsutum HOM05D001582 ORTHO05D001598 3.1e-07 60.5 130 30.0
Lj3g0023393 Lotus japonicus HOM05D001582 ORTHO05D001598 3.1e-07 60.5 130 25.4
Nn8g39238 Nelumbo nucifera HOM05D001582 ORTHO05D001598 3.1e-07 60.5 130 27.7
RcHm_v2.0_Chr6g0312571 Rosa chinensis HOM05D001582 ORTHO05D001598 3.1e-07 60.5 144 27.1
RcHm_v2.0_Chr6g0312641 Rosa chinensis HOM05D001582 ORTHO05D001598 3.1e-07 60.5 144 27.1
SEGI_15316 Sequoiadendron giganteum HOM05D004881 ORTHO05D001598 3.1e-07 60.5 57 45.6
CiPaw.04G082000 Carya illinoinensis HOM05D001582 ORTHO05D001598 4.1e-07 60.1 130 26.2
Lsat_1_v5_gn_1_111740 Lactuca sativa HOM05D001582 ORTHO05D001598 4.1e-07 60.1 130 26.9
Potri.007G106000 Populus trichocarpa HOM05D001582 ORTHO05D001598 4.1e-07 60.1 130 26.2
SEGI_13830 Sequoiadendron giganteum HOM05D004881 ORTHO05D384759 4.1e-07 60.1 53 47.2
SEGI_39103 Sequoiadendron giganteum HOM05D004881 ORTHO05D385318 4.1e-07 60.1 53 47.2
vmacro11992 Vaccinium macrocarpon HOM05D001582 ORTHO05D001598 4.1e-07 60.1 123 26.8
CSS0013473 Camellia sinensis var. sinensis HOM05D001582 ORTHO05D001598 5.3e-07 59.7 130 26.2
CSS0043680 Camellia sinensis var. sinensis HOM05D001582 ORTHO05D001598 5.3e-07 59.7 130 26.2
CsaV3_3G046740 Cucumis sativus L. HOM05D001582 ORTHO05D001598 5.3e-07 59.7 133 27.8
Migut.H00703 Erythranthe guttata HOM05D001582 ORTHO05D001598 5.3e-07 59.7 130 27.7
PSO782G3910 Papaver somniferum HOM05D001582 ORTHO05D001598 5.3e-07 59.7 130 30.0
Phvul.011G186500 Phaseolus vulgaris HOM05D001582 ORTHO05D001598 5.3e-07 59.7 130 26.2
Psat4g141720 Pisum sativum HOM05D001582 ORTHO05D001598 5.3e-07 59.7 130 26.2
SGA_v2.0_scaffold237G43810 Striga asiatica HOM05D001582 ORTHO05D001598 5.3e-07 59.7 148 26.4
SGA_v2.0_scaffold370G50116 Striga asiatica HOM05D001582 ORTHO05D001598 5.3e-07 59.7 130 27.7
TWI32G0587 Tripterygium wilfordii HOM05D001582 ORTHO05D001598 5.3e-07 59.7 130 26.9
VMungo1127G1636 Vigna mungo HOM05D001582 ORTHO05D001598 5.3e-07 59.7 130 25.4
FAN24G2643 Fragaria x ananassa HOM05D001582 ORTHO05D001598 6.9e-07 59.3 144 27.8
SEGI_18256 Sequoiadendron giganteum HOM05D004881 ORTHO05D387175 6.9e-07 59.3 53 47.2
SEGI_38044 Sequoiadendron giganteum HOM05D004881 ORTHO05D001598 6.9e-07 59.3 76 39.5
BraA01t03067Z Brassica rapa HOM05D001582 ORTHO05D001598 9.1e-07 58.9 135 25.2
FvH4_2g30231 Fragaria vesca HOM05D001582 ORTHO05D001598 9.1e-07 58.9 144 27.8
FAN26G0877 Fragaria x ananassa HOM05D001582 ORTHO05D001598 9.1e-07 58.9 130 24.6
FAN28G2098 Fragaria x ananassa HOM05D001582 ORTHO05D001598 9.1e-07 58.9 130 24.6
Prupe.1G465300 Prunus persica HOM05D001582 ORTHO05D001598 9.1e-07 58.9 130 28.5
QL02p001677 Quercus lobata HOM05D001582 ORTHO05D001598 9.1e-07 58.9 138 25.4
SEGI_21286 Sequoiadendron giganteum HOM05D004881 ORTHO05D386367 9.1e-07 58.9 53 49.1
SEGI_35497 Sequoiadendron giganteum HOM05D004881 ORTHO05D385669 9.1e-07 58.9 53 49.1
SEGI_41308 Sequoiadendron giganteum HOM05D004881 ORTHO05D001598 9.1e-07 58.9 63 41.3
FvH4_1g11391 Fragaria vesca HOM05D001582 ORTHO05D001598 1.2e-06 58.5 130 24.6
MD08G1135300 Malus domestica HOM05D001582 ORTHO05D001598 1.2e-06 58.5 130 26.2
SEGI_21343 Sequoiadendron giganteum HOM05D004881 ORTHO05D384648 1.2e-06 58.5 76 36.8
SEGI_25939 Sequoiadendron giganteum HOM05D001582 ORTHO05D011374 1.2e-06 58.5 61 44.3
SEGI_38797 Sequoiadendron giganteum HOM05D001582 ORTHO05D011374 1.2e-06 58.5 57 49.1
Aqoxy7G03767 Aquilegia oxysepala HOM05D001582 ORTHO05D001598 1.5e-06 58.2 130 29.2
MSTRG.2650 Avicennia marina HOM05D001582 ORTHO05D001598 2.0e-06 57.8 130 26.2
CSS0004749 Camellia sinensis var. sinensis HOM05D001582 ORTHO05D001598 2.0e-06 57.8 130 25.4
Nitab4.5_0003780g0020 Nicotiana tabacum HOM05D001582 ORTHO05D001598 2.0e-06 57.8 142 24.6
SEGI_06707 Sequoiadendron giganteum HOM05D004881 ORTHO05D001598 2.0e-06 57.8 76 35.5
THA.LOC104815571 Tarenaya hassleriana HOM05D001582 ORTHO05D001598 2.0e-06 57.8 130 23.1
CiPaw.08G016500 Carya illinoinensis HOM05D001582 ORTHO05D001598 2.6e-06 57.4 130 29.2
Glyma.14G089400 Glycine max HOM05D001582 ORTHO05D001598 2.6e-06 57.4 131 26.7
Glyma.14G089900 Glycine max HOM05D001582 ORTHO05D001598 2.6e-06 57.4 131 26.7
Glyma.18G182100 Glycine max HOM05D001582 ORTHO05D001598 2.6e-06 57.4 131 26.7
Dinv35874 Davidia involucrata HOM05D001582 ORTHO05D001598 3.4e-06 57.0 130 26.2
SEGI_15038 Sequoiadendron giganteum HOM05D001582 ORTHO05D011374 4.5e-06 56.6 54 48.1
SEGI_37578 Sequoiadendron giganteum HOM05D004881 ORTHO05D385301 4.5e-06 56.6 83 34.9
SEGI_37716 Sequoiadendron giganteum HOM05D001582 ORTHO05D011374 4.5e-06 56.6 54 48.1
SEGI_14840 Sequoiadendron giganteum HOM05D004881 ORTHO05D386394 5.9e-06 56.2 231 23.4
SEGI_21856 Sequoiadendron giganteum HOM05D004881 ORTHO05D384553 5.9e-06 56.2 49 46.9
SEGI_22618 Sequoiadendron giganteum HOM05D004881 ORTHO05D001598 5.9e-06 56.2 52 46.2
Sc07g0007690 Simmondsia chinensis HOM05D001582 ORTHO05D001598 5.9e-06 56.2 131 25.2
PSO063G7251 Papaver somniferum HOM05D001582 ORTHO05D001598 7.7e-06 55.8 130 29.2
RcHm_v2.0_Chr4g0406971 Rosa chinensis HOM05D001582 ORTHO05D001598 7.7e-06 55.8 130 23.8
SEGI_40106 Sequoiadendron giganteum HOM05D004881 ORTHO05D384906 7.7e-06 55.8 62 40.3


User provided reference genes

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