Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01129 Sequoiadendron giganteum HOM05D005950 ORTHO05D008673 1.5e-116 422.9 221 100.0
MBI10_g32324_MAGBIO Magnolia biondii HOM05D005950 ORTHO05D008673 8.2e-83 310.8 208 72.6
CDE02G3863 Ceratophyllum demersum HOM05D005950 ORTHO05D008673 4.1e-82 308.5 211 70.1
ATR0582G132 Amborella trichopoda HOM05D005950 ORTHO05D008673 3.8e-80 302.0 211 69.2
TAR371G0811 Trochodendron aralioides HOM05D005950 ORTHO05D008673 1.1e-79 300.4 208 71.2
QL03p049137 Quercus lobata HOM05D005950 ORTHO05D008673 1.4e-79 300.1 207 71.0
Sed0005763 Sechium edule HOM05D005950 ORTHO05D008673 3.2e-79 298.9 208 71.2
COL.COLO4_36001 Corchorus olitorius HOM05D005950 ORTHO05D008673 5.5e-79 298.1 210 71.0
MELO3C022359.2 Cucumis melo HOM05D005950 ORTHO05D008673 7.2e-79 297.7 214 69.6
Dinv03756 Davidia involucrata HOM05D005950 ORTHO05D008673 1.6e-78 296.6 209 68.9
Manes.08G101200 Manihot esculenta HOM05D005950 ORTHO05D008673 2.1e-78 296.2 208 68.8
GSVIVG01001090001 Vitis vinifera HOM05D005950 ORTHO05D008673 2.1e-78 296.2 208 69.7
Haze_12503 Corylus avellana HOM05D005950 ORTHO05D008673 2.7e-78 295.8 208 71.2
CSS0041196 Camellia sinensis var. sinensis HOM05D005950 ORTHO05D008673 3.6e-78 295.4 212 69.3
CSS0009236 Camellia sinensis var. sinensis HOM05D005950 ORTHO05D008673 4.6e-78 295.0 212 69.3
Duzib248G1270 Durio zibethinus HOM05D005950 ORTHO05D008673 4.6e-78 295.0 216 67.1
Gorai.002G021400 Gossypium raimondii HOM05D005950 ORTHO05D008673 4.6e-78 295.0 212 68.4
MD13G1130900 Malus domestica HOM05D005950 ORTHO05D008673 4.6e-78 295.0 208 68.8
Hma1.2p1_0660F.1_g197630 Hydrangea macrophylla HOM05D005950 ORTHO05D008673 7.9e-78 294.3 204 70.1
Potri.001G100300 Populus trichocarpa HOM05D005950 ORTHO05D008673 7.9e-78 294.3 208 68.8
AUR62005715 Chenopodium quinoa HOM05D005950 ORTHO05D008673 1.0e-77 293.9 204 71.6
CsaV3_6G007730 Cucumis sativus L. HOM05D005950 ORTHO05D008673 1.4e-77 293.5 214 68.7
Eucgr.B03560 Eucalyptus grandis HOM05D005950 ORTHO05D008673 1.4e-77 293.5 206 69.4
Sabra01G0075200 Salix brachista HOM05D005950 ORTHO05D008673 1.4e-77 293.5 209 68.4
HPP92_007045 Vanilla planifolia HOM05D005950 ORTHO05D008673 1.4e-77 293.5 208 70.7
Sc19g0003090 Simmondsia chinensis HOM05D005950 ORTHO05D008673 1.8e-77 293.1 212 68.4
Thecc.02G192100 Theobroma cacao HOM05D005950 ORTHO05D008673 2.3e-77 292.7 214 67.8
FAN17G1731 Fragaria x ananassa HOM05D005950 ORTHO05D008673 3.0e-77 292.4 208 68.8
RcHm_v2.0_Chr4g0428871 Rosa chinensis HOM05D005950 ORTHO05D008673 3.0e-77 292.4 208 68.3
TAR629G3081 Trochodendron aralioides HOM05D005950 ORTHO05D008673 3.0e-77 292.4 207 69.1
Lsat_1_v5_gn_3_32320 Lactuca sativa HOM05D005950 ORTHO05D008673 3.9e-77 292.0 208 68.3
Actinidia33998 Actinidia chinensis HOM05D005950 ORTHO05D008673 5.1e-77 291.6 210 69.0
FvH4_4g22640 Fragaria vesca HOM05D005950 ORTHO05D008673 5.1e-77 291.6 208 68.3
FAN12G2095 Fragaria x ananassa HOM05D005950 ORTHO05D008673 5.1e-77 291.6 208 68.3
Peaxi162Scf00023g00931 Petunia axillaris HOM05D005950 ORTHO05D008673 5.1e-77 291.6 208 69.7
Aqoxy5G03108 Aquilegia oxysepala HOM05D005950 ORTHO05D008673 3.3e-76 288.9 208 68.8
Gohir.A01G020600 Gossypium hirsutum HOM05D005950 ORTHO05D008673 3.3e-76 288.9 212 66.5
PGR102G2360 Punica granatum HOM05D005950 ORTHO05D008673 3.3e-76 288.9 208 69.2
RhsimUnG0153300 Rhododendron simsii HOM05D005950 ORTHO05D008673 3.3e-76 288.9 208 67.8
Atru.chr12.1419 Acer truncatum HOM05D005950 ORTHO05D008673 4.3e-76 288.5 208 67.8
Pp3c8_12800 Physcomitrium patens HOM05D005950 ORTHO05D008673 4.3e-76 288.5 210 67.6
Rhsim12G0072500 Rhododendron simsii HOM05D005950 ORTHO05D008673 4.3e-76 288.5 208 67.8
Ah.03g135560 Amaranthus hybridus HOM05D005950 ORTHO05D008673 5.7e-76 288.1 208 66.8
CAN.G624.24 Capsicum annuum HOM05D005950 ORTHO05D008673 5.7e-76 288.1 208 69.7
FAN07G2488 Fragaria x ananassa HOM05D005950 ORTHO05D008673 9.7e-76 287.3 208 67.8
PSO017G6070 Papaver somniferum HOM05D005950 ORTHO05D008673 9.7e-76 287.3 204 67.6
PSO478G4484 Papaver somniferum HOM05D005950 ORTHO05D008673 1.7e-75 286.6 204 68.6
Prupe.1G214800 Prunus persica HOM05D005950 ORTHO05D008673 2.2e-75 286.2 208 65.9
vmacro16072 Vaccinium macrocarpon HOM05D005950 ORTHO05D008673 2.2e-75 286.2 207 69.1
Ciclev10005525m.g Citrus clementina HOM05D005950 ORTHO05D008673 2.8e-75 285.8 208 67.3
Hund27394 Selenicereus undatus HOM05D005950 ORTHO05D008673 2.8e-75 285.8 208 67.8
CiPaw.05G101200 Carya illinoinensis HOM05D005950 ORTHO05D008673 3.7e-75 285.4 208 68.3
BcaC05g26819 Brassica carinata HOM05D005950 ORTHO05D008673 4.8e-75 285.0 207 68.1
EL10Ac6g13611 Beta vulgaris HOM05D005950 ORTHO05D008673 8.2e-75 284.3 208 67.8
BolC5t31407H Brassica oleracea HOM05D005950 ORTHO05D008673 8.2e-75 284.3 207 67.6
PGSC0003DMG400028387 Solanum tuberosum HOM05D005950 ORTHO05D008673 8.2e-75 284.3 208 68.3
Solyc05g012700.3 Solanum lycopersicum HOM05D005950 ORTHO05D008673 1.8e-74 283.1 208 67.8
Nitab4.5_0006153g0020 Nicotiana tabacum HOM05D005950 ORTHO05D008673 2.4e-74 282.7 208 68.3
DCAR_024633 Daucus carota HOM05D000512 ORTHO05D008673 4.1e-74 282.0 208 66.3
HanXRQChr06g0175111 Helianthus annuus HOM05D005950 ORTHO05D008673 4.1e-74 282.0 208 67.3
Sopen05g007530 Solanum pennellii HOM05D005950 ORTHO05D008673 4.1e-74 282.0 208 67.3
THA.LOC104820536 Tarenaya hassleriana HOM05D005950 ORTHO05D008673 4.1e-74 282.0 208 67.3
Cc11_g15000 Coffea canephora HOM05D005950 ORTHO05D008673 5.3e-74 281.6 209 66.5
SalBow2G0445 Salvia bowleyana HOM05D005950 ORTHO05D008673 5.3e-74 281.6 209 69.4
CANSAT01G2759 Cannabis sativa HOM05D005950 ORTHO05D008673 1.2e-73 280.4 208 64.9
Lalb_Chr06g0164721 Lupinus albus HOM05D005950 ORTHO05D008673 1.2e-73 280.4 212 64.6
Oeu027106.1 Olea europaea HOM05D005950 ORTHO05D008673 1.5e-73 280.0 208 67.3
Cpa.g.sc182.2 Carica papaya HOM05D005950 ORTHO05D008673 2.0e-73 279.6 208 66.8
BcaB07g32425 Brassica carinata HOM05D005950 ORTHO05D008673 2.6e-73 279.3 207 66.2
Carub.0001s2657 Capsella rubella HOM05D005950 ORTHO05D008673 2.6e-73 279.3 208 65.9
TWI36G0089 Tripterygium wilfordii HOM05D005950 ORTHO05D008673 2.6e-73 279.3 208 65.9
C05p26890 Brassica napus HOM05D005950 ORTHO05D008673 3.4e-73 278.9 208 66.3
Aa31sc45G70 Aethionema arabicum HOM05D005950 ORTHO05D008673 4.5e-73 278.5 208 65.9
Thhalv10008446m.g Eutrema salsugineum HOM05D005950 ORTHO05D008673 4.5e-73 278.5 208 66.3
SMO367G1143 Selaginella moellendorffii HOM05D005950 ORTHO05D008673 4.5e-73 278.5 216 63.4
CARHR027610 Cardamine hirsuta HOM05D005950 ORTHO05D008673 5.9e-73 278.1 208 66.3
LjContig00470g0001843 Lotus japonicus HOM05D005950 ORTHO05D008673 7.7e-73 277.7 211 64.9
Sp1g24330 Schrenkiella parvula HOM05D005950 ORTHO05D008673 7.7e-73 277.7 208 65.4
Phvul.007G000300 Phaseolus vulgaris HOM05D005950 ORTHO05D008673 1.0e-72 277.3 209 65.1
AT1G28140 Arabidopsis thaliana HOM05D005950 ORTHO05D008673 1.7e-72 276.6 208 65.9
AL1G41670 Arabidopsis lyrata HOM05D005950 ORTHO05D008673 2.9e-72 275.8 207 66.2
A09p37910 Brassica napus HOM05D005950 ORTHO05D008673 2.9e-72 275.8 208 66.3
arahy.Tifrunner.gnm1.ann1.MTDN4F Arachis hypogaea HOM05D005950 ORTHO05D008673 3.8e-72 275.4 207 64.7
BraA09t39303Z Brassica rapa HOM05D005950 ORTHO05D008673 3.8e-72 275.4 208 66.3
Nitab4.5_0000208g0380 Nicotiana tabacum HOM05D005950 ORTHO05D008673 8.5e-72 274.2 208 67.3
VMungo0720G2460 Vigna mungo HOM05D005950 ORTHO05D008673 1.9e-71 273.1 212 63.2
Os03g0850600 Oryza sativa ssp. japonica HOM05D005950 ORTHO05D008673 2.5e-71 272.7 208 65.9
Migut.K01055 Erythranthe guttata HOM05D005950 ORTHO05D008673 3.2e-71 272.3 209 67.0
Zm00001eb064540 Zea mays HOM05D005950 ORTHO05D008673 4.2e-71 271.9 211 64.0
Mapoly0027s0093 Marchantia polymorpha HOM05D005950 ORTHO05D008673 5.5e-71 271.6 216 61.1
TPR.G7754 Trifolium pratense HOM05D005950 ORTHO05D008673 7.2e-71 271.2 208 64.4
AagrBONN_evm.TU.Sc2ySwM_344.2741 Anthoceros agrestis HOM05D005950 ORTHO05D008673 4.7e-70 268.5 204 66.7
Medtr1g099520 Medicago truncatula HOM05D005950 ORTHO05D008673 6.1e-70 268.1 211 63.0
SGA_v2.0_scaffold157G37356 Striga asiatica HOM05D005950 ORTHO05D008673 7.9e-70 267.7 212 65.1
Lj3A1077T57 Lonicera japonica HOM05D005950 ORTHO05D008673 1.4e-69 266.9 202 66.8
MSTRG.8054 Avicennia marina HOM05D005950 ORTHO05D008673 1.8e-69 266.5 217 63.1
Duzib052G0358 Durio zibethinus HOM05D005950 ORTHO05D008673 7.4e-68 261.2 212 64.2
unitig_747.g21110 Utricularia gibba HOM05D005950 ORTHO05D008673 1.6e-65 253.4 213 62.4
AUR62028840 Chenopodium quinoa HOM05D005950 ORTHO05D008673 5.9e-65 251.5 202 64.4
Psat6g195320 Pisum sativum HOM05D005950 ORTHO05D008673 9.4e-63 244.2 179 68.2
CBR_g3659 Chara braunii HOM05D005950 ORTHO05D008673 2.1e-62 243.0 208 60.6
Ca_10708_v3 Cicer arietinum L. HOM05D005950 ORTHO05D008673 6.1e-62 241.5 179 67.0
ClCG06G001700 Citrullus lanatus HOM05D005950 ORTHO05D008673 1.8e-61 240.0 208 62.0
Glyma.20G249800 Glycine max HOM05D005950 ORTHO05D008673 7.5e-60 234.6 179 65.4
CDE06G2125 Ceratophyllum demersum HOM05D005950 ORTHO05D008673 1.6e-57 226.9 144 73.6
Nn3g16271 Nelumbo nucifera HOM05D005950 ORTHO05D008673 6.5e-56 221.5 145 73.8
arahy.Tifrunner.gnm1.ann1.PXY63F Arachis hypogaea HOM05D005950 ORTHO05D008673 6.1e-54 214.9 211 53.6
Hma1.2p1_0660F.1_g197620 Hydrangea macrophylla HOM05D005950 ORTHO05D008673 8.8e-53 211.1 146 71.2
MCO02G210 Micromonas commoda HOM05D005950 ORTHO05D008673 2.6e-44 183.0 200 50.0
TWI18G1378 Tripterygium wilfordii HOM05D005950 ORTHO05D008673 5.4e-42 175.3 148 60.8
Cre04.g228450 Chlamydomonas reinhardtii HOM05D005950 ORTHO05D008673 1.9e-39 166.8 205 46.3
PRCOL_00003015 Prasinoderma coloniale HOM05D005950 ORTHO05D008673 2.2e-35 153.3 204 43.6
Peaxi162Scf00040g00101 Petunia axillaris HOM05D005950 ORTHO05D008673 2.2e-27 126.7 137 52.6
TPR.G36353 Trifolium pratense HOM05D005950 ORTHO05D008673 3.2e-26 122.9 88 63.6
Zm00001eb422050 Zea mays HOM05D005950 ORTHO05D008673 1.8e-21 107.1 83 61.4
Zm00001eb141620 Zea mays HOM05D005950 ORTHO05D444810 2.4e-18 96.7 68 63.2
Gohir.D01G019100 Gossypium hirsutum HOM05D005950 ORTHO05D008673 2.3e-16 90.1 76 56.6
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 9.5e-15 84.7 63 60.3
Peaxi162Scf00003g00713 Petunia axillaris HOM05D005950 ORTHO05D305722 1.6e-14 84.0 138 41.3
Hma1.2p1_0660F.1_g197640 Hydrangea macrophylla HOM05D005950 ORTHO05D020170 6.2e-14 82.0 55 65.5
MD16G1141000 Malus domestica HOM05D005950 ORTHO05D020170 5.2e-13 79.0 61 57.4
FAN25G3256 Fragaria x ananassa HOM05D005950 ORTHO05D203075 8.9e-13 78.2 110 43.6
C05p26860 Brassica napus HOM05D005950 ORTHO05D020170 2.0e-12 77.0 52 69.2
BolC5t31405H Brassica oleracea HOM05D005950 ORTHO05D020170 4.9e-11 72.4 49 67.3
FAN20G0916 Fragaria x ananassa HOM05D005950 ORTHO05D020170 6.4e-11 72.0 58 55.2
A09p37930 Brassica napus HOM05D005950 ORTHO05D020170 1.4e-10 70.9 50 64.0
AL1G56270 Arabidopsis lyrata HOM05D005950 ORTHO05D000283 1.9e-10 70.5 62 54.8
Peaxi162Scf00059g01815 Petunia axillaris HOM05D005950 ORTHO05D306406 2.4e-10 70.1 169 32.5
Peaxi162Scf00968g00313 Petunia axillaris HOM05D005950 ORTHO05D305879 2.4e-10 70.1 103 39.8
Peaxi162Scf00141g00098 Petunia axillaris HOM05D005950 ORTHO05D306108 2.7e-09 66.6 43 67.4
Glyma.10G298600 Glycine max HOM05D005950 ORTHO05D020170 4.3e-07 59.3 50 52.0


User provided reference genes

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