Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01116 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 2.8e-80 302.0 163 100.0
SEGI_13536 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 1.5e-36 156.8 90 86.7
ATR0171G017 Amborella trichopoda HOM05D005391 ORTHO05D006694 3.4e-33 145.6 152 53.9
Peaxi162Scf00045g01932 Petunia axillaris HOM05D005391 ORTHO05D006694 1.7e-32 143.3 180 50.0
Nn3g16438 Nelumbo nucifera HOM05D005391 ORTHO05D006694 2.2e-32 142.9 162 49.4
CDE04G2377 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 7.0e-31 137.9 151 53.0
CiPaw.12G044000 Carya illinoinensis HOM05D005391 ORTHO05D006694 1.2e-30 137.1 186 46.2
MBI07_g28244_MAGBIO Magnolia biondii HOM05D005391 ORTHO05D006694 3.5e-30 135.6 166 50.0
Nitab4.5_0000264g0120 Nicotiana tabacum HOM05D005391 ORTHO05D006694 3.5e-30 135.6 188 45.7
CDE10G0912 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 4.5e-30 135.2 153 52.9
vmacro16727 Vaccinium macrocarpon HOM05D005391 ORTHO05D006694 5.9e-30 134.8 171 47.4
PSO478G3696 Papaver somniferum HOM05D005391 ORTHO05D006694 7.7e-30 134.4 160 48.8
PGSC0003DMG400026284 Solanum tuberosum HOM05D005391 ORTHO05D006694 1.0e-29 134.0 194 43.3
Aqoxy3G01572 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 1.3e-29 133.7 161 47.8
PSO017G3900 Papaver somniferum HOM05D005391 ORTHO05D006694 1.3e-29 133.7 160 48.1
Actinidia36818 Actinidia chinensis HOM05D005391 ORTHO05D006694 2.3e-29 132.9 174 46.6
Lsat_1_v5_gn_4_81240 Lactuca sativa HOM05D005391 ORTHO05D006694 2.3e-29 132.9 175 46.3
Nn4g22289 Nelumbo nucifera HOM05D005391 ORTHO05D006694 2.9e-29 132.5 163 49.1
Potri.012G099200 Populus trichocarpa HOM05D005391 ORTHO05D006694 2.9e-29 132.5 171 46.2
Solyc08g006670.3 Solanum lycopersicum HOM05D005391 ORTHO05D006694 5.0e-29 131.7 194 42.8
Sopen08g002620 Solanum pennellii HOM05D005391 ORTHO05D006694 5.0e-29 131.7 194 42.8
MD15G1005900 Malus domestica HOM05D005391 ORTHO05D006694 6.6e-29 131.3 190 43.7
Lj5A95T81 Lonicera japonica HOM05D005391 ORTHO05D006694 1.1e-28 130.6 205 43.4
Dinv23158 Davidia involucrata HOM05D005391 ORTHO05D006694 1.5e-28 130.2 181 45.9
ECA232G1626 Erigeron canadensis HOM05D005391 ORTHO05D006694 1.5e-28 130.2 170 44.7
TAR371G0831 Trochodendron aralioides HOM05D005391 ORTHO05D006694 1.9e-28 129.8 163 47.9
Sabra12G0072400 Salix brachista HOM05D005391 ORTHO05D006694 3.3e-28 129.0 175 47.4
Potri.015G097800 Populus trichocarpa HOM05D005391 ORTHO05D006694 4.2e-28 128.6 180 42.2
TAR629G0488 Trochodendron aralioides HOM05D005391 ORTHO05D006694 5.5e-28 128.3 172 44.2
MD08G1006700 Malus domestica HOM05D005391 ORTHO05D006694 7.2e-28 127.9 190 41.1
TWI23G0649 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 7.2e-28 127.9 182 44.0
FAN15G0439 Fragaria x ananassa HOM05D005391 ORTHO05D006694 9.5e-28 127.5 184 42.9
GSVIVG01008565001 Vitis vinifera HOM05D005391 ORTHO05D006694 9.5e-28 127.5 171 46.8
Manes.14G050400 Manihot esculenta HOM05D005391 ORTHO05D006694 1.6e-27 126.7 196 41.3
Mapoly0007s0225 Marchantia polymorpha HOM05D005391 ORTHO05D006694 1.6e-27 126.7 153 47.7
CSS0043065 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 2.8e-27 125.9 177 42.9
FAN27G0224 Fragaria x ananassa HOM05D005391 ORTHO05D006694 3.6e-27 125.6 185 42.7
Lj1g0005006 Lotus japonicus HOM05D005391 ORTHO05D006694 3.6e-27 125.6 173 43.9
Prupe.1G358600 Prunus persica HOM05D005391 ORTHO05D006694 3.6e-27 125.6 187 41.2
Atru.chr6.1808 Acer truncatum HOM05D005391 ORTHO05D006694 4.7e-27 125.2 160 46.9
Rhsim12G0176000 Rhododendron simsii HOM05D005391 ORTHO05D006694 6.1e-27 124.8 173 45.1
COL.COLO4_28143 Corchorus olitorius HOM05D005391 ORTHO05D006694 8.0e-27 124.4 186 43.5
DCAR_016386 Daucus carota HOM05D005391 ORTHO05D006694 8.0e-27 124.4 188 40.4
FvH4_2g37750 Fragaria vesca HOM05D005391 ORTHO05D006694 8.0e-27 124.4 185 42.2
Thecc.03G130500 Theobroma cacao HOM05D005391 ORTHO05D006694 8.0e-27 124.4 185 43.2
Aa31LG1G18560 Aethionema arabicum HOM05D005391 ORTHO05D006694 1.0e-26 124.0 179 44.7
BolC3t18550H Brassica oleracea HOM05D005391 ORTHO05D006694 1.0e-26 124.0 172 46.5
Zm00001eb421130 Zea mays HOM05D005391 ORTHO05D006694 1.0e-26 124.0 169 45.6
CSS0003205 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.4e-26 123.6 181 43.1
CSS0033680 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.4e-26 123.6 181 43.1
CiPaw.11G006200 Carya illinoinensis HOM05D005391 ORTHO05D006694 1.4e-26 123.6 181 44.2
C03p62960 Brassica napus HOM05D005391 ORTHO05D006694 3.0e-26 122.5 172 45.9
CARHR277330 Cardamine hirsuta HOM05D005391 ORTHO05D006694 3.0e-26 122.5 169 45.6
THA.LOC104798944 Tarenaya hassleriana HOM05D005391 ORTHO05D006694 3.0e-26 122.5 172 43.6
TWI14G1436 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 3.0e-26 122.5 193 40.4
Cpa.g.sc13.100 Carica papaya HOM05D005391 ORTHO05D006694 4.0e-26 122.1 180 45.6
Gohir.A07G050600 Gossypium hirsutum HOM05D005391 ORTHO05D006694 4.0e-26 122.1 183 42.1
CANSAT80G1472 Cannabis sativa HOM05D005391 ORTHO05D006694 5.2e-26 121.7 190 41.1
FAN20G0870 Fragaria x ananassa HOM05D005391 ORTHO05D006694 5.2e-26 121.7 184 41.8
Oeu009657.1 Olea europaea HOM05D005391 ORTHO05D006694 5.2e-26 121.7 204 37.7
Cfa018784 Carpinus fangiana HOM05D005391 ORTHO05D006694 6.8e-26 121.3 180 46.7
Gohir.D07G055100 Gossypium hirsutum HOM05D005391 ORTHO05D006694 1.5e-25 120.2 183 41.5
Gorai.001G058300 Gossypium raimondii HOM05D005391 ORTHO05D006694 1.5e-25 120.2 183 41.5
Aqoxy3G00618 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 2.0e-25 119.8 180 44.4
A06p30110 Brassica napus HOM05D005391 ORTHO05D006694 2.0e-25 119.8 172 44.2
BraA06t25962Z Brassica rapa HOM05D005391 ORTHO05D006694 2.0e-25 119.8 172 44.2
RcHm_v2.0_Chr6g0303761 Rosa chinensis HOM05D005391 ORTHO05D006694 2.0e-25 119.8 189 42.9
SGA_v2.0_scaffold169G38603 Striga asiatica HOM05D005391 ORTHO05D006694 2.0e-25 119.8 179 41.3
Cc08_g07550 Coffea canephora HOM05D005391 ORTHO05D006694 2.6e-25 119.4 191 41.4
BcaB02g09758 Brassica carinata HOM05D005391 ORTHO05D006694 3.4e-25 119.0 170 42.9
Ciclev10032864m.g Citrus clementina HOM05D005391 ORTHO05D006694 3.4e-25 119.0 180 43.9
Thhalv10004987m.g Eutrema salsugineum HOM05D005391 ORTHO05D006694 3.4e-25 119.0 179 42.5
Psat5g051960 Pisum sativum HOM05D005391 ORTHO05D006694 3.4e-25 119.0 168 42.3
Duzib205G0229 Durio zibethinus HOM05D005391 ORTHO05D006694 4.4e-25 118.6 191 39.8
Sed0002904 Sechium edule HOM05D005391 ORTHO05D006694 4.4e-25 118.6 192 40.6
BraA09t36478Z Brassica rapa HOM05D005391 ORTHO05D006694 5.7e-25 118.2 163 43.6
Glyma.06G169200 Glycine max HOM05D005391 ORTHO05D006694 5.7e-25 118.2 163 47.2
Carub.0008s2418 Capsella rubella HOM05D005391 ORTHO05D006694 7.5e-25 117.9 173 42.2
Haze_07152 Corylus avellana HOM05D005391 ORTHO05D006694 7.5e-25 117.9 192 45.3
Glyma.04G196600 Glycine max HOM05D005391 ORTHO05D006694 7.5e-25 117.9 175 46.3
Hund08624 Selenicereus undatus HOM05D005391 ORTHO05D006694 7.5e-25 117.9 177 41.2
FAN26G2573 Fragaria x ananassa HOM05D005391 ORTHO05D006694 9.8e-25 117.5 165 44.2
MSTRG.25825 Avicennia marina HOM05D005391 ORTHO05D006694 1.3e-24 117.1 207 38.2
Sp2g26560 Schrenkiella parvula HOM05D005391 ORTHO05D006694 1.7e-24 116.7 173 41.6
A09p08280 Brassica napus HOM05D005391 ORTHO05D006694 2.2e-24 116.3 163 41.7
Ca_16053_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 2.8e-24 115.9 172 41.9
BcaB04g19920 Brassica carinata HOM05D005391 ORTHO05D006694 3.7e-24 115.5 173 40.5
Migut.E01449 Erythranthe guttata HOM05D005391 ORTHO05D006694 3.7e-24 115.5 194 39.7
AL8G40540 Arabidopsis lyrata HOM05D005391 ORTHO05D006694 4.9e-24 115.2 179 41.9
QL10p002677 Quercus lobata HOM05D005391 ORTHO05D006694 6.3e-24 114.8 174 45.4
SalBow8G3527 Salvia bowleyana HOM05D005391 ORTHO05D006694 1.4e-23 113.6 198 37.4
Ah.03g143420 Amaranthus hybridus HOM05D005391 ORTHO05D006694 1.8e-23 113.2 171 40.9
MELO3C026202.2 Cucumis melo HOM05D005391 ORTHO05D006694 2.4e-23 112.8 182 42.3
EL10Ac6g15093 Beta vulgaris HOM05D005391 ORTHO05D006694 3.2e-23 112.5 183 41.0
AUR62003784 Chenopodium quinoa HOM05D005391 ORTHO05D006694 3.2e-23 112.5 183 42.1
CsaV3_1G000500 Cucumis sativus L. HOM05D005391 ORTHO05D006694 3.2e-23 112.5 195 41.5
AUR62002017 Chenopodium quinoa HOM05D005391 ORTHO05D006694 4.1e-23 112.1 183 40.4
arahy.Tifrunner.gnm1.ann1.3A01UJ Arachis hypogaea HOM05D005391 ORTHO05D006694 5.4e-23 111.7 198 39.4
Sabra15G0118500 Salix brachista HOM05D005391 ORTHO05D006694 5.4e-23 111.7 192 40.1
unitig_32.g10935 Utricularia gibba HOM05D005391 ORTHO05D006694 7.0e-23 111.3 203 37.4
Medtr3g099130 Medicago truncatula HOM05D005391 ORTHO05D006694 1.2e-22 110.5 179 40.2
TPR.G14215 Trifolium pratense HOM05D005391 ORTHO05D006694 1.2e-22 110.5 167 42.5
arahy.Tifrunner.gnm1.ann1.S11VKX Arachis hypogaea HOM05D005391 ORTHO05D006694 1.6e-22 110.2 190 40.0
Phvul.009G165600 Phaseolus vulgaris HOM05D005391 ORTHO05D006694 1.6e-22 110.2 179 42.5
AT5G63480 Arabidopsis thaliana HOM05D005391 ORTHO05D006694 2.0e-22 109.8 174 40.8
Lalb_Chr23g0273681 Lupinus albus HOM05D005391 ORTHO05D006694 2.7e-22 109.4 175 42.3
BolC9t53848H Brassica oleracea HOM05D005391 ORTHO05D006694 1.0e-21 107.5 161 41.6
HPP92_023119 Vanilla planifolia HOM05D005391 ORTHO05D006694 5.0e-21 105.1 172 43.0
BcaC04g23332 Brassica carinata HOM05D005391 ORTHO05D006694 6.6e-21 104.8 161 39.8
C09p09360 Brassica napus HOM05D005391 ORTHO05D006694 6.6e-21 104.8 161 39.8
Pp3c7_3280 Physcomitrium patens HOM05D005391 ORTHO05D006694 8.6e-21 104.4 175 38.3
Nitab4.5_0001362g0010 Nicotiana tabacum HOM05D005391 ORTHO05D006694 1.9e-20 103.2 170 44.1
SMO364G0653 Selaginella moellendorffii HOM05D005391 ORTHO05D006694 2.1e-19 99.8 144 41.0
arahy.Tifrunner.gnm1.ann1.CP8X4X Arachis hypogaea HOM05D005391 ORTHO05D006694 4.7e-19 98.6 232 34.5
arahy.Tifrunner.gnm1.ann1.HT4698 Arachis hypogaea HOM05D005391 ORTHO05D006694 4.7e-19 98.6 232 34.5
AagrBONN_evm.TU.Sc2ySwM_369.268 Anthoceros agrestis HOM05D005391 ORTHO05D006694 8.0e-19 97.8 155 42.6
ClCG06G017970 Citrullus lanatus HOM05D005391 ORTHO05D006694 6.8e-18 94.7 230 32.2
HanXRQChr09g0273301 Helianthus annuus HOM05D005391 ORTHO05D006694 2.6e-17 92.8 134 42.5
Actinidia08882 Actinidia chinensis HOM05D005391 ORTHO05D006694 8.3e-16 87.8 148 40.5
DCAR_021623 Daucus carota HOM05D005391 ORTHO05D006694 4.1e-15 85.5 160 35.0
Oeu040668.1 Olea europaea HOM05D005391 ORTHO05D006694 2.0e-14 83.2 135 40.0
FAN23G2258 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.3e-13 80.5 136 40.4
Ah.07g204620 Amaranthus hybridus HOM05D005391 ORTHO05D006694 3.9e-13 79.0 141 38.3
Ca_01190_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 7.3e-12 74.7 100 44.0
CSS0010891 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.2e-11 73.9 112 40.2
Sc04g0000550 Simmondsia chinensis HOM05D005391 ORTHO05D006694 4.7e-11 72.0 97 47.4
Zm00001eb085410 Zea mays HOM05D005391 ORTHO05D006694 6.2e-11 71.6 114 41.2
FAN23G0903 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.8e-10 70.1 165 34.5
VMungo1309G0665 Vigna mungo HOM05D005391 ORTHO05D006694 6.8e-10 68.2 126 38.1
Os04g0388601 Oryza sativa ssp. japonica HOM05D005391 ORTHO05D006694 4.4e-09 65.5 169 31.4
CSS0049043 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 3.7e-08 62.4 57 52.6


User provided reference genes

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