Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00997 Sequoiadendron giganteum HOM05D004142 ORTHO05D031210 6.3e-112 407.5 215 100.0
SEGI_29991 Sequoiadendron giganteum HOM05D004142 ORTHO05D031210 1.8e-58 229.9 123 100.0
SEGI_36078 Sequoiadendron giganteum HOM05D000540 ORTHO05D000681 8.1e-27 124.8 92 69.6
SEGI_07615 Sequoiadendron giganteum HOM05D001785 ORTHO05D001933 1.0e-21 107.8 86 58.1
Pp3c9_12610 Physcomitrium patens HOM05D004142 ORTHO05D005411 3.2e-15 86.3 121 43.0
Nn5g31006 Nelumbo nucifera HOM05D004142 ORTHO05D005411 2.5e-12 76.6 123 39.0
AagrBONN_evm.TU.Sc2ySwM_228.5327 Anthoceros agrestis HOM05D004142 ORTHO05D005411 7.4e-12 75.1 137 42.3
AL3G50110 Arabidopsis lyrata HOM05D004142 ORTHO05D005411 8.1e-11 71.6 124 33.1
Atru.chr3.3247 Acer truncatum HOM05D004142 ORTHO05D005411 1.4e-10 70.9 123 38.2
ATR0807G091 Amborella trichopoda HOM05D004142 ORTHO05D005411 2.4e-10 70.1 120 39.2
Oeu037462.1 Olea europaea HOM05D004142 ORTHO05D005411 6.9e-10 68.6 120 39.2
Rhsim11G0198100 Rhododendron simsii HOM05D004142 ORTHO05D005411 9.0e-10 68.2 123 37.4
TWI75G0433 Tripterygium wilfordii HOM05D004142 ORTHO05D005411 9.0e-10 68.2 120 38.3
AT2G17250 Arabidopsis thaliana HOM05D004142 ORTHO05D005411 1.2e-09 67.8 124 33.1
BcaB03g16472 Brassica carinata HOM05D004142 ORTHO05D005411 2.0e-09 67.0 117 35.0
Cpa.g.sc60.19 Carica papaya HOM05D004142 ORTHO05D005411 2.6e-09 66.6 124 37.9
Prupe.8G180000 Prunus persica HOM05D004142 ORTHO05D005411 2.6e-09 66.6 120 39.2
Solyc10g074560.2 Solanum lycopersicum HOM05D004142 ORTHO05D005411 2.6e-09 66.6 120 36.7
Sopen10g027050 Solanum pennellii HOM05D004142 ORTHO05D005411 2.6e-09 66.6 120 36.7
SGA_v2.0_scaffold98G29302 Striga asiatica HOM05D004142 ORTHO05D005411 2.6e-09 66.6 120 38.3
CARHR293590 Cardamine hirsuta HOM05D004142 ORTHO05D005411 3.4e-09 66.2 123 35.0
TWI31G1182 Tripterygium wilfordii HOM05D004142 ORTHO05D005411 3.4e-09 66.2 120 37.5
CANSAT25G0210 Cannabis sativa HOM05D004142 ORTHO05D005411 5.8e-09 65.5 115 39.1
Eucgr.G01885 Eucalyptus grandis HOM05D004142 ORTHO05D005411 5.8e-09 65.5 123 35.8
Eucgr.H04975 Eucalyptus grandis HOM05D004142 ORTHO05D005411 5.8e-09 65.5 123 35.8
BcaB07g31738 Brassica carinata HOM05D004142 ORTHO05D005411 7.6e-09 65.1 123 33.3
Migut.B01359 Erythranthe guttata HOM05D004142 ORTHO05D005411 7.6e-09 65.1 120 35.0
Lj5C171T17 Lonicera japonica HOM05D004142 ORTHO05D005411 7.6e-09 65.1 120 36.7
Mapoly0043s0054 Marchantia polymorpha HOM05D004142 ORTHO05D005411 7.6e-09 65.1 131 37.4
Carub.0003s3119 Capsella rubella HOM05D004142 ORTHO05D005411 9.9e-09 64.7 124 36.3
Nitab4.5_0005657g0020 Nicotiana tabacum HOM05D004142 ORTHO05D005411 9.9e-09 64.7 123 35.0
MSTRG.27614 Avicennia marina HOM05D004142 ORTHO05D005411 1.7e-08 63.9 120 38.3
EL10Ac9g21530 Beta vulgaris HOM05D004142 ORTHO05D005411 1.7e-08 63.9 112 37.5
Thhalv10022610m.g Eutrema salsugineum HOM05D004142 ORTHO05D005411 2.2e-08 63.5 126 32.5
Potri.009G168100 Populus trichocarpa HOM05D004142 ORTHO05D005411 2.9e-08 63.2 123 31.7
Sp3g30590 Schrenkiella parvula HOM05D004142 ORTHO05D005411 2.9e-08 63.2 127 33.1
Nitab4.5_0001700g0140 Nicotiana tabacum HOM05D004142 ORTHO05D005411 3.8e-08 62.8 123 35.0
CAN.G765.24 Capsicum annuum HOM05D004142 ORTHO05D005411 4.9e-08 62.4 120 35.8
TAR318G0001 Trochodendron aralioides HOM05D004142 ORTHO05D005411 4.9e-08 62.4 123 30.1
TAR633G0693 Trochodendron aralioides HOM05D004142 ORTHO05D005411 4.9e-08 62.4 123 30.1
Aa31LG8G14620 Aethionema arabicum HOM05D004142 ORTHO05D005411 6.4e-08 62.0 124 34.7
BraA09t36766Z Brassica rapa HOM05D004142 ORTHO05D005411 6.4e-08 62.0 126 33.3
Gorai.013G064000 Gossypium raimondii HOM05D004142 ORTHO05D005411 6.4e-08 62.0 123 35.0
CDE05G3311 Ceratophyllum demersum HOM05D004142 ORTHO05D005411 8.4e-08 61.6 123 35.0
vmacro02340 Vaccinium macrocarpon HOM05D004142 ORTHO05D005411 8.4e-08 61.6 120 36.7
COL.COLO4_34310 Corchorus olitorius HOM05D004142 ORTHO05D005411 1.1e-07 61.2 123 31.7
Duzib052G0377 Durio zibethinus HOM05D004142 ORTHO05D005411 1.1e-07 61.2 123 33.3
PGR042G3440 Punica granatum HOM05D004142 ORTHO05D005411 1.4e-07 60.8 123 33.3
HPP92_025663 Vanilla planifolia HOM05D004142 ORTHO05D005411 1.4e-07 60.8 123 35.0
Ciclev10028022m.g Citrus clementina HOM05D004142 ORTHO05D005411 1.9e-07 60.5 115 35.7
Manes.04G066800 Manihot esculenta HOM05D004142 ORTHO05D005411 1.9e-07 60.5 123 35.0
QL11p056391 Quercus lobata HOM05D004142 ORTHO05D005411 1.9e-07 60.5 123 35.8
Thecc.02G146100 Theobroma cacao HOM05D004142 ORTHO05D005411 1.9e-07 60.5 123 33.3
Gohir.D13G057300 Gossypium hirsutum HOM05D004142 ORTHO05D005411 2.4e-07 60.1 123 34.1
MD10G1141700 Malus domestica HOM05D004142 ORTHO05D005411 2.4e-07 60.1 120 34.2
ClCG02G003400 Citrullus lanatus HOM05D004142 ORTHO05D005411 3.2e-07 59.7 120 35.8
Cc09_g10830 Coffea canephora HOM05D004142 ORTHO05D005411 3.2e-07 59.7 120 35.0
CsaV3_7G001920 Cucumis sativus L. HOM05D004142 ORTHO05D005411 3.2e-07 59.7 120 35.0
MD05G1138800 Malus domestica HOM05D004142 ORTHO05D005411 3.2e-07 59.7 120 35.8
SalBow5G1400 Salvia bowleyana HOM05D004142 ORTHO05D005411 3.2e-07 59.7 123 33.3
Ah.05g178840 Amaranthus hybridus HOM05D004142 ORTHO05D005411 4.2e-07 59.3 109 36.7
MELO3C013248.2 Cucumis melo HOM05D004142 ORTHO05D005411 4.2e-07 59.3 120 36.7
Gohir.A13G065000 Gossypium hirsutum HOM05D004142 ORTHO05D005411 4.2e-07 59.3 123 34.1
PSO675G0945 Papaver somniferum HOM05D004142 ORTHO05D005411 4.2e-07 59.3 115 37.4
C09p13280 Brassica napus HOM05D004142 ORTHO05D005411 5.5e-07 58.9 131 33.6
BolC9t54221H Brassica oleracea HOM05D004142 ORTHO05D005411 5.5e-07 58.9 131 33.6
CSS0035317 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 5.5e-07 58.9 123 34.1
Sed0023655 Sechium edule HOM05D004142 ORTHO05D005411 5.5e-07 58.9 120 36.7
TPR.G8874 Trifolium pratense HOM05D004142 ORTHO05D005411 5.5e-07 58.9 115 36.5
CSS0002990 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 7.1e-07 58.5 123 34.1
FvH4_2g16780 Fragaria vesca HOM05D004142 ORTHO05D005411 7.1e-07 58.5 120 35.0
FAN24G0393 Fragaria x ananassa HOM05D004142 ORTHO05D005411 7.1e-07 58.5 120 35.0
PSO541G0415 Papaver somniferum HOM05D004142 ORTHO05D005411 7.1e-07 58.5 115 35.7
THA.LOC104819692 Tarenaya hassleriana HOM05D004142 ORTHO05D005411 7.1e-07 58.5 123 31.7
CSS0014725 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 9.3e-07 58.2 123 34.1
CSS0025136 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 9.3e-07 58.2 123 34.1
HanXRQChr09g0239911 Helianthus annuus HOM05D004142 ORTHO05D005411 9.3e-07 58.2 121 30.6
SalBow5G4664 Salvia bowleyana HOM05D004142 ORTHO05D005411 9.3e-07 58.2 123 32.5
A07p03800 Brassica napus HOM05D004142 ORTHO05D005411 1.2e-06 57.8 123 32.5
Ca_01556_v3 Cicer arietinum L. HOM05D004142 ORTHO05D005411 1.2e-06 57.8 120 34.2
Glyma.02G245400 Glycine max HOM05D004142 ORTHO05D005411 1.2e-06 57.8 120 32.5
Peaxi162Scf01986g00004 Petunia axillaris HOM05D004142 ORTHO05D005411 1.2e-06 57.8 109 34.9
Psat2g043640 Pisum sativum HOM05D004142 ORTHO05D005411 1.2e-06 57.8 120 31.7
HanXRQChr16g0515111 Helianthus annuus HOM05D004142 ORTHO05D005411 1.6e-06 57.4 121 31.4
Lsat_1_v5_gn_5_183861 Lactuca sativa HOM05D004142 ORTHO05D005411 1.6e-06 57.4 121 32.2
VMungo0647G1269 Vigna mungo HOM05D004142 ORTHO05D005411 1.6e-06 57.4 112 36.6
BcaC04g22983 Brassica carinata HOM05D004142 ORTHO05D005411 2.1e-06 57.0 131 32.8
Ca_05793_v3 Cicer arietinum L. HOM05D004142 ORTHO05D005411 2.1e-06 57.0 120 34.2
ECA233G5375 Erigeron canadensis HOM05D004142 ORTHO05D005411 2.1e-06 57.0 123 35.8
Phvul.008G235900 Phaseolus vulgaris HOM05D004142 ORTHO05D005411 2.1e-06 57.0 120 35.0
AagrBONN_evm.TU.Sc2ySwM_228.5283 Anthoceros agrestis HOM05D004142 ORTHO05D031210 2.7e-06 56.6 100 43.0
BraA07t28174Z Brassica rapa HOM05D004142 ORTHO05D005411 2.7e-06 56.6 123 32.5
FAN15G2670 Fragaria x ananassa HOM05D004142 ORTHO05D005411 2.7e-06 56.6 120 32.5
Os04g0585300 Oryza sativa ssp. japonica HOM05D004142 ORTHO05D005411 3.5e-06 56.2 120 35.0
RcHm_v2.0_Chr6g0280901 Rosa chinensis HOM05D004142 ORTHO05D005411 4.6e-06 55.8 112 33.9
Hund06363 Selenicereus undatus HOM05D004142 ORTHO05D005411 4.6e-06 55.8 120 34.2
Sc08g0002210 Simmondsia chinensis HOM05D004142 ORTHO05D005411 4.6e-06 55.8 120 33.3
Actinidia20577 Actinidia chinensis HOM05D004142 ORTHO05D005411 6.0e-06 55.5 120 36.7
Sabra09G0130600 Salix brachista HOM05D004142 ORTHO05D005852 6.0e-06 55.5 123 30.9
Zm00001eb428130 Zea mays HOM05D004142 ORTHO05D005411 7.9e-06 55.1 123 32.5


User provided reference genes

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