Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00877 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.9e-130 469.2 234 100.0
SEGI_02027 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.2e-95 353.6 233 78.5
SEGI_15796 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.8e-43 180.3 100 90.0
Lj2g0024262 Lotus japonicus HOM05D004203 ORTHO05D004830 3.7e-41 172.6 208 47.6
Glyma.09G285700 Glycine max HOM05D004203 ORTHO05D004830 1.4e-40 170.6 213 47.4
PSO782G5227 Papaver somniferum HOM05D004203 ORTHO05D004830 1.4e-40 170.6 215 45.1
SEGI_01054 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.8e-40 170.2 210 45.2
PSO063G7450 Papaver somniferum HOM05D004203 ORTHO05D004830 2.4e-40 169.9 215 45.1
CAN.G143.62 Capsicum annuum HOM05D004203 ORTHO05D004830 3.1e-40 169.5 211 49.3
PGR142G4147 Punica granatum HOM05D004203 ORTHO05D004830 4.1e-40 169.1 211 48.3
Aqoxy3G04325 Aquilegia oxysepala HOM05D004203 ORTHO05D004830 6.9e-40 168.3 193 51.3
DCAR_026874 Daucus carota HOM05D004203 ORTHO05D004830 6.9e-40 168.3 218 45.0
QL01p000433 Quercus lobata HOM05D004203 ORTHO05D004830 3.4e-39 166.0 193 47.7
ATR0124G027 Amborella trichopoda HOM05D004203 ORTHO05D004830 4.5e-39 165.6 211 47.9
Eucgr.G02598 Eucalyptus grandis HOM05D004203 ORTHO05D004830 4.5e-39 165.6 215 44.7
Eucgr.L03404 Eucalyptus grandis HOM05D004203 ORTHO05D004830 4.5e-39 165.6 215 44.7
Hma1.2p1_0513F.1_g169570 Hydrangea macrophylla HOM05D004203 ORTHO05D004830 1.3e-38 164.1 211 48.8
VMungo0900G0001 Vigna mungo HOM05D004203 ORTHO05D004830 1.3e-38 164.1 210 46.2
Phvul.003G000800 Phaseolus vulgaris HOM05D004203 ORTHO05D004830 2.2e-38 163.3 210 45.7
Prupe.1G350900 Prunus persica HOM05D004203 ORTHO05D004830 2.9e-38 162.9 219 44.3
Lalb_Chr17g0337651 Lupinus albus HOM05D004203 ORTHO05D004830 3.8e-38 162.5 193 49.7
Eucgr.G02607 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.1e-37 161.0 216 45.8
CDE04G2894 Ceratophyllum demersum HOM05D004203 ORTHO05D004830 1.9e-37 160.2 187 48.1
Ciclev10015311m.g Citrus clementina HOM05D004203 ORTHO05D004830 1.9e-37 160.2 210 44.3
AUR62017749 Chenopodium quinoa HOM05D004203 ORTHO05D004830 2.5e-37 159.8 213 45.1
HanXRQChr15g0472171 Helianthus annuus HOM05D004203 ORTHO05D004830 2.5e-37 159.8 192 46.4
Oeu027932.1 Olea europaea HOM05D004203 ORTHO05D004830 2.5e-37 159.8 213 45.5
Nitab4.5_0001803g0070 Nicotiana tabacum HOM05D004203 ORTHO05D004830 3.2e-37 159.5 193 47.7
TAR623G0552 Trochodendron aralioides HOM05D004203 ORTHO05D004830 3.2e-37 159.5 220 46.4
AUR62032903 Chenopodium quinoa HOM05D004203 ORTHO05D004830 4.2e-37 159.1 213 44.6
Dinv37943 Davidia involucrata HOM05D004203 ORTHO05D004830 4.2e-37 159.1 210 46.2
Nitab4.5_0001018g0120 Nicotiana tabacum HOM05D004203 ORTHO05D004830 5.5e-37 158.7 193 48.2
TWI74G0727 Tripterygium wilfordii HOM05D004203 ORTHO05D004830 7.2e-37 158.3 202 45.5
Eucgr.G02596 Eucalyptus grandis HOM05D004203 ORTHO05D004830 9.4e-37 157.9 218 41.3
Lsat_1_v5_gn_3_35621 Lactuca sativa HOM05D004203 ORTHO05D004830 9.4e-37 157.9 209 45.0
AagrBONN_evm.TU.Sc2ySwM_368.1197 Anthoceros agrestis HOM05D004203 ORTHO05D004830 1.2e-36 157.5 200 46.5
COL.COLO4_33135 Corchorus olitorius HOM05D004203 ORTHO05D004830 1.2e-36 157.5 203 43.3
Psat6g100840 Pisum sativum HOM05D004203 ORTHO05D004830 1.2e-36 157.5 199 46.2
BcaB06g26068 Brassica carinata HOM05D004203 ORTHO05D004830 1.6e-36 157.1 215 46.0
Cpa.g.sc257.7 Carica papaya HOM05D004203 ORTHO05D004830 1.6e-36 157.1 210 47.6
ClCG01G007960 Citrullus lanatus HOM05D004203 ORTHO05D004830 1.6e-36 157.1 216 44.4
Manes.04G161600 Manihot esculenta HOM05D004203 ORTHO05D004830 1.6e-36 157.1 211 45.0
Actinidia13679 Actinidia chinensis HOM05D004203 ORTHO05D004830 2.1e-36 156.8 217 45.2
BcaB04g20673 Brassica carinata HOM05D004203 ORTHO05D004830 2.1e-36 156.8 209 44.0
Peaxi162Scf00603g00031 Petunia axillaris HOM05D004203 ORTHO05D004830 2.1e-36 156.8 216 48.6
CARHR095520 Cardamine hirsuta HOM05D004203 ORTHO05D004830 2.7e-36 156.4 210 44.8
Atru.chr11.58 Acer truncatum HOM05D004203 ORTHO05D004830 3.6e-36 156.0 218 43.1
Carub.0003s1989 Capsella rubella HOM05D004203 ORTHO05D004830 3.6e-36 156.0 210 44.3
AL3G33640 Arabidopsis lyrata HOM05D004203 ORTHO05D004830 4.7e-36 155.6 210 44.8
Haze_17403 Corylus avellana HOM05D004203 ORTHO05D004830 4.7e-36 155.6 198 44.9
Sabra07G0000900 Salix brachista HOM05D004203 ORTHO05D004830 4.7e-36 155.6 212 44.8
Atru.chr11.55 Acer truncatum HOM05D004203 ORTHO05D004830 6.1e-36 155.2 218 43.6
Sp3g18010 Schrenkiella parvula HOM05D004203 ORTHO05D004830 6.1e-36 155.2 210 45.2
Aa31LG8G6770 Aethionema arabicum HOM05D004203 ORTHO05D004830 1.0e-35 154.5 224 42.0
AT3G19990 Arabidopsis thaliana HOM05D004203 ORTHO05D004830 1.0e-35 154.5 210 45.7
Cc11_g04600 Coffea canephora HOM05D004203 ORTHO05D004830 1.0e-35 154.5 188 47.3
Potri.007G001200 Populus trichocarpa HOM05D004203 ORTHO05D004830 1.0e-35 154.5 215 43.3
HPP92_022176 Vanilla planifolia HOM05D004203 ORTHO05D004830 1.4e-35 154.1 204 41.7
MBI06_g12559_MAGBIO Magnolia biondii HOM05D004203 ORTHO05D004830 1.8e-35 153.7 221 46.2
C01p44100 Brassica napus HOM05D004203 ORTHO05D004830 2.3e-35 153.3 208 44.7
EL10Ac9g23011 Beta vulgaris HOM05D004203 ORTHO05D004830 3.9e-35 152.5 201 44.8
A01p34680 Brassica napus HOM05D004203 ORTHO05D004830 3.9e-35 152.5 208 44.7
BraA01t03555Z Brassica rapa HOM05D004203 ORTHO05D004830 3.9e-35 152.5 208 44.7
CiPaw.15G000900 Carya illinoinensis HOM05D004203 ORTHO05D004830 3.9e-35 152.5 208 41.3
unitig_749.g13343 Utricularia gibba HOM05D004203 ORTHO05D004830 3.9e-35 152.5 212 46.2
BcaC09g48955 Brassica carinata HOM05D004203 ORTHO05D004830 5.2e-35 152.1 208 44.2
Medtr0365s0010 Medicago truncatula HOM05D004203 ORTHO05D004830 5.2e-35 152.1 220 40.5
Os02g0828200 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 5.2e-35 152.1 211 43.1
Sed0024681 Sechium edule HOM05D004203 ORTHO05D004830 5.2e-35 152.1 180 46.7
Hund24393 Selenicereus undatus HOM05D004203 ORTHO05D004830 5.2e-35 152.1 181 47.5
BcaC05g28375 Brassica carinata HOM05D004203 ORTHO05D004830 6.7e-35 151.8 213 45.1
BolC5t33177H Brassica oleracea HOM05D004203 ORTHO05D004830 6.7e-35 151.8 213 45.1
BraA05t21796Z Brassica rapa HOM05D004203 ORTHO05D004830 6.7e-35 151.8 211 43.6
Cc11_g04630 Coffea canephora HOM05D004203 ORTHO05D004830 6.7e-35 151.8 195 46.2
Migut.L00789 Erythranthe guttata HOM05D004203 ORTHO05D004830 6.7e-35 151.8 228 40.8
BolC1t04373H Brassica oleracea HOM05D004203 ORTHO05D004830 8.8e-35 151.4 208 44.2
FvH4_4g37300 Fragaria vesca HOM05D004203 ORTHO05D004830 8.8e-35 151.4 185 47.6
Thecc.02G153000 Theobroma cacao HOM05D004203 ORTHO05D004830 8.8e-35 151.4 215 43.3
A05p29130 Brassica napus HOM05D004203 ORTHO05D004830 1.1e-34 151.0 211 43.6
Cfa018675 Carpinus fangiana HOM05D004203 ORTHO05D004830 1.5e-34 150.6 200 45.0
RcHm_v2.0_Chr4g0447121 Rosa chinensis HOM05D004203 ORTHO05D004830 1.5e-34 150.6 185 45.4
MSTRG.8095 Avicennia marina HOM05D004203 ORTHO05D004830 2.6e-34 149.8 219 44.7
FAN17G0196 Fragaria x ananassa HOM05D004203 ORTHO05D004830 2.6e-34 149.8 184 48.4
Gohir.A13G062700 Gossypium hirsutum HOM05D004203 ORTHO05D004830 2.6e-34 149.8 210 43.8
Ca_12360_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 3.3e-34 149.4 218 43.1
Ca_12363_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 3.3e-34 149.4 218 43.1
Gohir.D13G059200 Gossypium hirsutum HOM05D004203 ORTHO05D004830 3.3e-34 149.4 210 43.8
Gorai.013G067000 Gossypium raimondii HOM05D004203 ORTHO05D004830 3.3e-34 149.4 210 43.8
Rhsim02G0210900 Rhododendron simsii HOM05D004203 ORTHO05D004830 3.3e-34 149.4 243 41.2
THA.LOC104826512 Tarenaya hassleriana HOM05D004203 ORTHO05D004830 3.3e-34 149.4 216 43.1
Thhalv10020793m.g Eutrema salsugineum HOM05D004203 ORTHO05D004830 4.4e-34 149.1 210 42.9
Sopen11g002260 Solanum pennellii HOM05D004203 ORTHO05D004830 4.4e-34 149.1 213 46.0
Duzib248G1608 Durio zibethinus HOM05D004203 ORTHO05D004830 5.7e-34 148.7 215 43.3
ClCG01G007980 Citrullus lanatus HOM05D004203 ORTHO05D004830 9.7e-34 147.9 207 44.0
PGSC0003DMG400000979 Solanum tuberosum HOM05D004203 ORTHO05D004830 9.7e-34 147.9 211 44.5
Migut.O00611 Erythranthe guttata HOM05D004203 ORTHO05D004830 1.3e-33 147.5 228 41.7
MD13G1001600 Malus domestica HOM05D004203 ORTHO05D004830 1.3e-33 147.5 197 44.2
Eucgr.G02594 Eucalyptus grandis HOM05D004203 ORTHO05D004830 2.8e-33 146.4 213 42.3
Zm00001eb259360 Zea mays HOM05D004203 ORTHO05D004830 2.8e-33 146.4 190 43.7
GSVIVG01034366001 Vitis vinifera HOM05D004203 ORTHO05D004830 3.7e-33 146.0 126 60.3
SalBow2G2162 Salvia bowleyana HOM05D004203 ORTHO05D004830 6.3e-33 145.2 205 44.9
Lsat_1_v5_gn_4_27720 Lactuca sativa HOM05D004203 ORTHO05D004830 1.1e-32 144.4 212 41.5
MELO3C005084.2 Cucumis melo HOM05D004203 ORTHO05D004830 1.4e-32 144.1 211 43.1
HPP92_005409 Vanilla planifolia HOM05D004203 ORTHO05D004830 4.1e-32 142.5 207 44.0
MD16G1004500 Malus domestica HOM05D004203 ORTHO05D004830 5.3e-32 142.1 177 45.2
CsaV3_5G021930 Cucumis sativus L. HOM05D004203 ORTHO05D004830 7.0e-32 141.7 211 42.2
QL01p000540 Quercus lobata HOM05D004203 ORTHO05D004830 9.1e-32 141.4 201 40.8
CANSAT78G1232 Cannabis sativa HOM05D004203 ORTHO05D004830 1.2e-31 141.0 208 44.2
C05p44530 Brassica napus HOM05D004203 ORTHO05D004830 2.0e-31 140.2 138 55.1
TPR.G34239 Trifolium pratense HOM05D004203 ORTHO05D004830 2.0e-31 140.2 189 45.0
Lsat_1_v5_gn_8_139521 Lactuca sativa HOM05D004203 ORTHO05D004830 2.6e-31 139.8 210 40.5
Duzib132G1212 Durio zibethinus HOM05D004203 ORTHO05D004830 5.9e-31 138.7 206 41.3
SEGI_32381 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 7.7e-31 138.3 117 53.8
Sc08g0004160 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.0e-30 137.9 204 42.6
ECA246G1911 Erigeron canadensis HOM05D004203 ORTHO05D004830 1.3e-30 137.5 198 41.4
Eucgr.G02595 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.7e-30 137.1 213 41.3
Mapoly0080s0012 Marchantia polymorpha HOM05D004203 ORTHO05D004830 2.2e-30 136.7 206 41.7
SHI10741 Sapria himalayana HOM05D004203 ORTHO05D004830 2.9e-30 136.3 197 42.6
CSS0042488 Camellia sinensis var. sinensis HOM05D004203 ORTHO05D004830 5.0e-30 135.6 211 43.1
ECA234G3608 Erigeron canadensis HOM05D004203 ORTHO05D004830 5.0e-30 135.6 209 39.7
ECA233G1072 Erigeron canadensis HOM05D004203 ORTHO05D004830 1.1e-29 134.4 196 41.3
ECA246G0515 Erigeron canadensis HOM05D004203 ORTHO05D004830 1.2e-28 131.0 198 40.4
SMO117G0084 Selaginella moellendorffii HOM05D004203 ORTHO05D004830 2.7e-28 129.8 180 42.8
Pp3c17_21640 Physcomitrium patens HOM05D004203 ORTHO05D004830 4.7e-28 129.0 185 40.0
Thecc.02G152900 Theobroma cacao HOM05D004203 ORTHO05D004830 4.7e-28 129.0 129 50.4
HanXRQChr09g0251301 Helianthus annuus HOM05D004203 ORTHO05D004830 6.1e-28 128.6 193 37.3
BcaB08g37041 Brassica carinata HOM05D004203 ORTHO05D004830 1.4e-27 127.5 127 55.1
Os02g0828500 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 2.3e-27 126.7 182 38.5
QL01p000454 Quercus lobata HOM05D004203 ORTHO05D004830 2.3e-27 126.7 122 51.6
HanXRQChr17g0559591 Helianthus annuus HOM05D004203 ORTHO05D004830 1.7e-25 120.6 203 36.0
Gohir.D13G059100 Gossypium hirsutum HOM05D004203 ORTHO05D004830 2.0e-23 113.6 217 34.1
Prupe.1G351100 Prunus persica HOM05D004203 ORTHO05D004830 2.0e-23 113.6 92 60.9
Gorai.013G066900 Gossypium raimondii HOM05D004203 ORTHO05D004830 2.7e-23 113.2 217 34.1
SEGI_22616 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 3.2e-21 106.3 94 62.8
Medtr0400s0020 Medicago truncatula HOM05D004203 ORTHO05D004830 1.2e-20 104.4 92 56.5
Sc08g0004180 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.4e-16 90.9 80 57.5
Cre16.g671500 Chlamydomonas reinhardtii HOM05D004203 ORTHO05D004830 1.8e-16 90.5 176 33.5
Lj3A845T90 Lonicera japonica HOM05D004203 ORTHO05D004830 3.1e-16 89.7 167 38.3
BcaB06g26576 Brassica carinata HOM05D004203 ORTHO05D004830 2.0e-15 87.0 78 55.1
SEGI_08354 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 2.0e-15 87.0 47 93.6
Atru.chr11.60 Acer truncatum HOM05D004203 ORTHO05D004830 1.5e-13 80.9 156 34.6
BcaB08g37040 Brassica carinata HOM05D004203 ORTHO05D004830 1.2e-12 77.8 66 60.6
GSVIVG01034368001 Vitis vinifera HOM05D004203 ORTHO05D004830 4.0e-11 72.8 213 30.5
BcaC07g39871 Brassica carinata HOM05D004203 ORTHO05D004830 6.8e-11 72.0 69 55.1
BcaB06g27495 Brassica carinata HOM05D004203 ORTHO05D004830 5.7e-10 68.9 60 60.0
Os03g0251425 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 1.8e-08 63.9 64 43.8


User provided reference genes

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