Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00850 Sequoiadendron giganteum HOM05D005379 ORTHO05D006661 7.9e-54 213.4 98 100.0
AUR62002241 Chenopodium quinoa HOM05D005379 ORTHO05D006661 8.0e-14 80.5 47 76.6
Hma1.2p1_0456F.1_g156820 Hydrangea macrophylla HOM05D005379 ORTHO05D006661 2.3e-13 79.0 72 55.6
Ah.13g071160 Amaranthus hybridus HOM05D005379 ORTHO05D006661 3.0e-13 78.6 47 74.5
EL10Ac3g05878 Beta vulgaris HOM05D005379 ORTHO05D006661 3.0e-13 78.6 47 74.5
Hund11852 Selenicereus undatus HOM05D005379 ORTHO05D006661 3.0e-13 78.6 47 72.3
Nitab4.5_0002211g0080 Nicotiana tabacum HOM05D005379 ORTHO05D006661 5.2e-13 77.8 47 76.6
AUR62015453 Chenopodium quinoa HOM05D005379 ORTHO05D006661 6.8e-13 77.4 47 74.5
Cfa013572 Carpinus fangiana HOM05D005379 ORTHO05D006661 8.8e-13 77.0 51 68.6
CsaV3_6G041840 Cucumis sativus L. HOM05D005379 ORTHO05D006661 8.8e-13 77.0 47 74.5
Haze_22191 Corylus avellana HOM05D005379 ORTHO05D006661 1.2e-12 76.6 46 76.1
MBI04_g36330_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 1.2e-12 76.6 47 74.5
ClCG01G015600 Citrullus lanatus HOM05D005379 ORTHO05D006661 1.5e-12 76.3 47 72.3
MELO3C008037.2 Cucumis melo HOM05D005379 ORTHO05D006661 2.0e-12 75.9 47 72.3
Dinv06588 Davidia involucrata HOM05D005379 ORTHO05D006661 2.0e-12 75.9 47 72.3
Nitab4.5_0000262g0030 Nicotiana tabacum HOM05D005379 ORTHO05D006661 2.0e-12 75.9 47 74.5
Nitab4.5_0000448g0020 Nicotiana tabacum HOM05D005379 ORTHO05D006661 2.0e-12 75.9 47 74.5
Nitab4.5_0010756g0010 Nicotiana tabacum HOM05D005379 ORTHO05D006661 2.0e-12 75.9 47 74.5
Sc18g0007310 Simmondsia chinensis HOM05D005379 ORTHO05D006661 2.0e-12 75.9 47 74.5
CANSAT56G0595 Cannabis sativa HOM05D005379 ORTHO05D006661 2.6e-12 75.5 47 74.5
CANSAT56G1106 Cannabis sativa HOM05D005379 ORTHO05D006661 2.6e-12 75.5 47 74.5
CANSAT56G1299 Cannabis sativa HOM05D005379 ORTHO05D006661 2.6e-12 75.5 47 74.5
Peaxi162Scf00167g00730 Petunia axillaris HOM05D005379 ORTHO05D006661 2.6e-12 75.5 46 76.1
Peaxi162Scf00304g01113 Petunia axillaris HOM05D005379 ORTHO05D006661 2.6e-12 75.5 46 76.1
Prupe.2G273100 Prunus persica HOM05D005379 ORTHO05D006661 4.4e-12 74.7 47 72.3
CANSAT56G1775 Cannabis sativa HOM05D005379 ORTHO05D006661 5.7e-12 74.3 47 72.3
Eucgr.K00130 Eucalyptus grandis HOM05D005379 ORTHO05D006661 5.7e-12 74.3 47 68.1
Rhsim03G0161700 Rhododendron simsii HOM05D005379 ORTHO05D006661 7.5e-12 73.9 47 70.2
Sed0000219 Sechium edule HOM05D005379 ORTHO05D006661 7.5e-12 73.9 47 70.2
vmacro06833 Vaccinium macrocarpon HOM05D005379 ORTHO05D006661 7.5e-12 73.9 47 70.2
GSVIVG01013977001 Vitis vinifera HOM05D005379 ORTHO05D006661 7.5e-12 73.9 47 72.3
CAN.G174.21 Capsicum annuum HOM05D005379 ORTHO05D006661 9.8e-12 73.6 47 72.3
FvH4_7g27000 Fragaria vesca HOM05D005379 ORTHO05D006661 9.8e-12 73.6 47 70.2
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 9.8e-12 73.6 47 70.2
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 9.8e-12 73.6 47 70.2
FAN10G0849 Fragaria x ananassa HOM05D005379 ORTHO05D006661 9.8e-12 73.6 47 70.2
Lj1A584T32 Lonicera japonica HOM05D005379 ORTHO05D006661 9.8e-12 73.6 47 72.3
Solyc06g034100.4 Solanum lycopersicum HOM05D005379 ORTHO05D006661 9.8e-12 73.6 47 72.3
Sopen06g010750 Solanum pennellii HOM05D005379 ORTHO05D006661 9.8e-12 73.6 47 72.3
CiPaw.08G041400 Carya illinoinensis HOM05D005379 ORTHO05D006661 1.3e-11 73.2 47 72.3
MBI04_g38758_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 1.3e-11 73.2 47 72.3
TAR375G0328 Trochodendron aralioides HOM05D005379 ORTHO05D006661 1.3e-11 73.2 47 70.2
Zm00001eb321690 Zea mays HOM05D005379 ORTHO05D006661 1.3e-11 73.2 47 70.2
Actinidia31671 Actinidia chinensis HOM05D005379 ORTHO05D006661 1.7e-11 72.8 47 68.1
CSS0027857 Camellia sinensis var. sinensis HOM05D005379 ORTHO05D006661 1.7e-11 72.8 47 70.2
MD01G1177600 Malus domestica HOM05D005379 ORTHO05D006661 1.7e-11 72.8 47 70.2
Manes.14G038300 Manihot esculenta HOM05D005379 ORTHO05D006661 1.7e-11 72.8 47 70.2
RcHm_v2.0_Chr1g0373791 Rosa chinensis HOM05D005379 ORTHO05D006661 1.7e-11 72.8 47 70.2
Sabra03G0109800 Salix brachista HOM05D005379 ORTHO05D006661 1.7e-11 72.8 47 72.3
Zm00001eb105230 Zea mays HOM05D005379 ORTHO05D006661 1.7e-11 72.8 46 71.7
FAN03G3283 Fragaria x ananassa HOM05D005379 ORTHO05D006661 2.2e-11 72.4 47 68.1
Gohir.A07G043200 Gossypium hirsutum HOM05D005379 ORTHO05D006661 2.2e-11 72.4 47 70.2
Gohir.D07G047600 Gossypium hirsutum HOM05D005379 ORTHO05D006661 2.2e-11 72.4 47 70.2
Gorai.001G050800 Gossypium raimondii HOM05D005379 ORTHO05D006661 2.2e-11 72.4 47 70.2
Hund04565 Selenicereus undatus HOM05D005379 ORTHO05D006661 2.2e-11 72.4 47 68.1
Os07g0490300 Oryza sativa ssp. japonica HOM05D005379 ORTHO05D006661 2.8e-11 72.0 47 68.1
QL09p028045 Quercus lobata HOM05D005379 ORTHO05D006661 2.8e-11 72.0 47 70.2
ATR0057G081 Amborella trichopoda HOM05D005379 ORTHO05D006661 3.7e-11 71.6 47 70.2
Ciclev10005581m.g Citrus clementina HOM05D005379 ORTHO05D006661 3.7e-11 71.6 47 68.1
Actinidia31774 Actinidia chinensis HOM05D005379 ORTHO05D006661 4.8e-11 71.2 47 70.2
CDE11G0172 Ceratophyllum demersum HOM05D005379 ORTHO05D006661 4.8e-11 71.2 47 66.0
TWI23G1062 Tripterygium wilfordii HOM05D005379 ORTHO05D006661 4.8e-11 71.2 47 70.2
HPP92_009947 Vanilla planifolia HOM05D005379 ORTHO05D006227 4.8e-11 71.2 47 68.1
MD07G1249400 Malus domestica HOM05D005379 ORTHO05D006661 6.3e-11 70.9 47 70.2
Oeu042535.3 Olea europaea HOM05D005379 ORTHO05D006661 6.3e-11 70.9 47 68.1
COL.COLO4_37344 Corchorus olitorius HOM05D003586 ORTHO05D004036 8.3e-11 70.5 46 67.4
Oeu022464.1 Olea europaea HOM05D005379 ORTHO05D006661 8.3e-11 70.5 47 68.1
Potri.003G151600 Populus trichocarpa HOM05D005379 ORTHO05D006661 8.3e-11 70.5 47 70.2
TAR374G0427 Trochodendron aralioides HOM05D005379 ORTHO05D006661 8.3e-11 70.5 47 70.2
Lalb_Chr05g0217631 Lupinus albus HOM05D005379 ORTHO05D006661 1.1e-10 70.1 47 66.0
PGR004G0100 Punica granatum HOM05D005379 ORTHO05D006661 1.4e-10 69.7 47 66.0
Thecc.03G149400 Theobroma cacao HOM05D005379 ORTHO05D006661 1.4e-10 69.7 47 66.0
Glyma.08G176800 Glycine max HOM05D005379 ORTHO05D006661 3.1e-10 68.6 47 66.0
Medtr2g009320 Medicago truncatula HOM05D005379 ORTHO05D006661 4.1e-10 68.2 47 68.1
arahy.Tifrunner.gnm1.ann1.3L844V Arachis hypogaea HOM05D005379 ORTHO05D006661 5.4e-10 67.8 45 68.9
Ca_00152_v3 Cicer arietinum L. HOM05D005379 ORTHO05D006661 5.4e-10 67.8 47 66.0
PSO063G0621 Papaver somniferum HOM05D005379 ORTHO05D006661 5.4e-10 67.8 47 63.8
PSO782G5074 Papaver somniferum HOM05D005379 ORTHO05D006661 5.4e-10 67.8 47 63.8
Psat1g214640 Pisum sativum HOM05D005379 ORTHO05D006661 5.4e-10 67.8 47 66.0
VMungo0540G0153 Vigna mungo HOM05D005379 ORTHO05D006661 5.4e-10 67.8 47 66.0
Phvul.006G202400 Phaseolus vulgaris HOM05D005379 ORTHO05D006661 7.0e-10 67.4 47 63.8
Cc02_g04670 Coffea canephora HOM05D005379 ORTHO05D006661 9.1e-10 67.0 43 69.8
Sp6g13420 Schrenkiella parvula HOM05D005379 ORTHO05D006661 9.1e-10 67.0 47 61.7
Lj3g0027387 Lotus japonicus HOM05D005379 ORTHO05D006661 1.2e-09 66.6 47 63.8
ECA238G1883 Erigeron canadensis HOM05D005379 ORTHO05D006661 1.6e-09 66.2 47 59.6
Glyma.15G056200 Glycine max HOM05D005379 ORTHO05D006661 4.5e-09 64.7 47 63.8
TPR.G9516 Trifolium pratense HOM05D005379 ORTHO05D006661 4.5e-09 64.7 47 66.0
AL8G25500 Arabidopsis lyrata HOM05D005379 ORTHO05D006661 5.9e-09 64.3 47 61.7
Carub.0008s1126 Capsella rubella HOM05D005379 ORTHO05D006661 5.9e-09 64.3 47 61.7
HanXRQChr08g0222701 Helianthus annuus HOM05D005379 ORTHO05D006661 5.9e-09 64.3 47 55.3
BcaB08g35480 Brassica carinata HOM05D005379 ORTHO05D006661 7.7e-09 63.9 47 59.6
HanXRQChr07g0205531 Helianthus annuus HOM05D005379 ORTHO05D006661 7.7e-09 63.9 47 59.6
DCAR_018078 Daucus carota HOM05D005379 ORTHO05D006661 1.0e-08 63.5 45 62.2
Aa31LG3G7760 Aethionema arabicum HOM05D005379 ORTHO05D006661 1.3e-08 63.2 47 61.7
AT5G51220 Arabidopsis thaliana HOM05D005379 ORTHO05D006661 1.3e-08 63.2 47 59.6
Lsat_1_v5_gn_8_9541 Lactuca sativa HOM05D005379 ORTHO05D006661 1.3e-08 63.2 47 55.3
SGA_v2.0_scaffold60G20811 Striga asiatica HOM05D005379 ORTHO05D006661 1.3e-08 63.2 46 67.4
Ah.13g066320 Amaranthus hybridus HOM05D005379 ORTHO05D006661 1.7e-08 62.8 33 84.8
Pp3c8_7310 Physcomitrium patens HOM05D005379 ORTHO05D006661 1.7e-08 62.8 43 60.5
THA.LOC104811535 Tarenaya hassleriana HOM05D005379 ORTHO05D006661 1.7e-08 62.8 47 61.7
CBR_g48514 Chara braunii HOM05D005379 ORTHO05D006661 2.2e-08 62.4 45 53.3
Thhalv10014342m.g Eutrema salsugineum HOM05D005379 ORTHO05D006661 2.2e-08 62.4 47 59.6
AagrBONN_evm.TU.Sc2ySwM_228.472 Anthoceros agrestis HOM05D005379 ORTHO05D006661 2.9e-08 62.0 43 60.5
CARHR256800 Cardamine hirsuta HOM05D005379 ORTHO05D006661 2.9e-08 62.0 47 57.4
unitig_0.g2509 Utricularia gibba HOM05D005379 ORTHO05D006661 2.9e-08 62.0 47 66.0
arahy.Tifrunner.gnm1.ann1.8RST7H Arachis hypogaea HOM05D005379 ORTHO05D006661 3.8e-08 61.6 41 70.7
MSTRG.8845 Avicennia marina HOM05D005379 ORTHO05D006661 5.0e-08 61.2 47 59.6
SalBow5G2200 Salvia bowleyana HOM05D005379 ORTHO05D006661 5.0e-08 61.2 48 66.7
BcaC04g20721 Brassica carinata HOM05D005379 ORTHO05D006661 6.5e-08 60.8 47 55.3
C09p39890 Brassica napus HOM05D005379 ORTHO05D006661 6.5e-08 60.8 47 55.3
BolC9t56888H Brassica oleracea HOM05D005379 ORTHO05D006661 6.5e-08 60.8 47 55.3
ECA233G0107 Erigeron canadensis HOM05D003586 ORTHO05D004036 6.5e-08 60.8 47 53.2
Migut.F00521 Erythranthe guttata HOM05D005379 ORTHO05D006661 6.5e-08 60.8 47 63.8
SalBow7G1847 Salvia bowleyana HOM05D005379 ORTHO05D006661 6.5e-08 60.8 48 66.7
SalBow7G3941 Salvia bowleyana HOM05D005379 ORTHO05D006661 6.5e-08 60.8 48 66.7
A10p07900 Brassica napus HOM05D005379 ORTHO05D006661 8.5e-08 60.5 47 55.3
BraSC35t46008Z Brassica rapa HOM05D005379 ORTHO05D006661 8.5e-08 60.5 47 55.3
HanXRQChr05g0139501 Helianthus annuus HOM05D005379 ORTHO05D006661 2.5e-07 58.9 47 48.9
Mapoly0029s0089 Marchantia polymorpha HOM05D005379 ORTHO05D006661 4.2e-07 58.2 43 55.8
Cpa.g.sc13.263 Carica papaya HOM05D005379 ORTHO05D006661 9.4e-07 57.0 34 76.5
Lalb_Chr16g0382801 Lupinus albus HOM05D005379 ORTHO05D006661 6.1e-06 54.3 35 62.9
A02p12440 Brassica napus HOM05D005379 ORTHO05D006661 8.0e-06 53.9 46 56.5


User provided reference genes

Program Settings