Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00835 Sequoiadendron giganteum HOM05D002969 ORTHO05D011582 0.0e+00 1966.8 991 100.0
SEGI_32279 Sequoiadendron giganteum HOM05D002969 ORTHO05D011582 6.8e-278 961.1 673 77.6
SEGI_30578 Sequoiadendron giganteum HOM05D000979 ORTHO05D003182 5.3e-222 775.4 657 65.9
SEGI_20098 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.9e-177 626.3 456 75.0
SEGI_07590 Sequoiadendron giganteum HOM05D009756 ORTHO05D011582 1.8e-100 371.7 228 80.7
SEGI_27268 Sequoiadendron giganteum HOM05D016871 ORTHO05D011582 1.7e-79 302.0 239 71.1
SEGI_00018 Sequoiadendron giganteum HOM05D009756 ORTHO05D011582 8.5e-79 299.7 294 59.9
SEGI_39433 Sequoiadendron giganteum HOM05D009756 ORTHO05D011582 1.6e-77 295.4 575 34.6
SEGI_20053 Sequoiadendron giganteum HOM05D001082 ORTHO05D005120 3.9e-76 290.8 293 47.1
SEGI_16881 Sequoiadendron giganteum HOM05D009756 ORTHO05D011582 4.1e-65 254.2 258 49.6
SEGI_14988 Sequoiadendron giganteum HOM05D009756 ORTHO05D011582 5.5e-62 243.8 293 41.6
SEGI_41627 Sequoiadendron giganteum HOM05D000014 ORTHO05D000044 7.7e-56 223.4 214 46.7
SEGI_41381 Sequoiadendron giganteum HOM05D009756 ORTHO05D011582 1.1e-54 219.5 213 50.7
SEGI_08063 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.2e-54 217.6 338 37.6
SEGI_18698 Sequoiadendron giganteum HOM05D016871 ORTHO05D011582 8.5e-47 193.4 156 68.6
SEGI_11384 Sequoiadendron giganteum HOM05D009756 ORTHO05D011582 2.1e-45 188.7 209 45.9
SEGI_04727 Sequoiadendron giganteum HOM05D001367 ORTHO05D011582 2.3e-44 185.3 179 53.6
SEGI_29315 Sequoiadendron giganteum HOM05D009756 ORTHO05D011582 7.0e-41 173.7 161 51.6
SEGI_18787 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 4.0e-36 157.9 121 61.2
TAR626G1632 Trochodendron aralioides HOM05D002969 ORTHO05D003308 2.8e-34 151.8 302 34.8
SEGI_19518 Sequoiadendron giganteum HOM05D016871 ORTHO05D007448 1.1e-33 149.8 249 36.9
MBI06_g12843_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 5.4e-33 147.5 305 33.8
Eucgr.J02821 Eucalyptus grandis HOM05D002969 ORTHO05D003308 7.0e-33 147.1 272 32.4
Haze_16025 Corylus avellana HOM05D002969 ORTHO05D003308 1.0e-31 143.3 320 33.8
FvH4_6g34630 Fragaria vesca HOM05D002969 ORTHO05D003308 3.9e-31 141.4 189 43.4
FAN09G2022 Fragaria x ananassa HOM05D002969 ORTHO05D003308 3.9e-31 141.4 189 43.4
FAN14G5519 Fragaria x ananassa HOM05D002969 ORTHO05D003308 6.6e-31 140.6 176 44.9
Dinv30673 Davidia involucrata HOM05D002969 ORTHO05D003308 1.1e-30 139.8 272 35.3
Dinv34333 Davidia involucrata HOM05D002969 ORTHO05D003308 1.1e-30 139.8 272 35.3
SEGI_22694 Sequoiadendron giganteum HOM05D000014 ORTHO05D011582 2.5e-30 138.7 170 47.1
FAN05G1938 Fragaria x ananassa HOM05D002969 ORTHO05D003308 4.3e-30 137.9 185 42.2
Cc02_g14940 Coffea canephora HOM05D002969 ORTHO05D003308 9.5e-30 136.7 273 33.3
Gohir.D04G009700 Gossypium hirsutum HOM05D002969 ORTHO05D003308 9.5e-30 136.7 272 34.9
Gorai.012G011500 Gossypium raimondii HOM05D002969 ORTHO05D003308 9.5e-30 136.7 272 36.0
RcHm_v2.0_Chr2g0145161 Rosa chinensis HOM05D002969 ORTHO05D003308 1.2e-29 136.3 201 39.3
Thecc.06G119100 Theobroma cacao HOM05D002969 ORTHO05D003308 1.6e-29 136.0 272 34.2
Manes.11G021000 Manihot esculenta HOM05D002969 ORTHO05D003308 2.1e-29 135.6 272 34.9
Atru.chr1.3951 Acer truncatum HOM05D002969 ORTHO05D003308 2.8e-29 135.2 224 36.6
CsaV3_3G015990 Cucumis sativus L. HOM05D002969 ORTHO05D003308 4.7e-29 134.4 274 35.0
Sed0027017 Sechium edule HOM05D002969 ORTHO05D003308 6.1e-29 134.0 274 32.1
Nn7g36584 Nelumbo nucifera HOM05D002969 ORTHO05D003308 8.0e-29 133.7 195 39.0
SEGI_26572 Sequoiadendron giganteum HOM05D003893 ORTHO05D011582 1.0e-28 133.3 194 32.5
Aqoxy7G01394 Aquilegia oxysepala HOM05D002969 ORTHO05D003308 1.4e-28 132.9 113 56.6
SEGI_19669 Sequoiadendron giganteum HOM05D009756 ORTHO05D011582 1.4e-28 132.9 99 65.7
Gohir.A05G405950 Gossypium hirsutum HOM05D002969 ORTHO05D003308 1.8e-28 132.5 272 34.2
PSO210G1276 Papaver somniferum HOM05D002969 ORTHO05D003308 2.3e-28 132.1 184 41.8
PSO447G0254 Papaver somniferum HOM05D002969 ORTHO05D003308 2.3e-28 132.1 184 41.3
GSVIVG01016771001 Vitis vinifera HOM05D002969 ORTHO05D003308 3.1e-28 131.7 111 55.0
COL.COLO4_30764 Corchorus olitorius HOM05D002969 ORTHO05D003308 4.0e-28 131.3 251 35.1
Lj7C292T8 Lonicera japonica HOM05D002969 ORTHO05D003308 4.0e-28 131.3 330 30.9
Psat1g003120 Pisum sativum HOM05D002969 ORTHO05D003308 5.2e-28 131.0 274 32.8
ClCG05G007230 Citrullus lanatus HOM05D002969 ORTHO05D003308 6.8e-28 130.6 273 31.9
Ciclev10024687m.g Citrus clementina HOM05D002969 ORTHO05D003308 8.9e-28 130.2 272 32.4
PSO017G1981 Papaver somniferum HOM05D002969 ORTHO05D003308 8.9e-28 130.2 336 31.8
CSS0043728 Camellia sinensis var. sinensis HOM05D002969 ORTHO05D003308 1.2e-27 129.8 191 37.2
QL05p007828 Quercus lobata HOM05D002969 ORTHO05D003308 2.0e-27 129.0 169 43.2
SEGI_28763 Sequoiadendron giganteum HOM05D003398 ORTHO05D003867 5.8e-27 127.5 195 35.4
Sopen09g004560 Solanum pennellii HOM05D002969 ORTHO05D003308 5.8e-27 127.5 313 33.5
Oeu007563.1 Olea europaea HOM05D002969 ORTHO05D003308 9.8e-27 126.7 273 34.1
Prupe.3G042500 Prunus persica HOM05D002969 ORTHO05D003308 1.3e-26 126.3 112 52.7
Actinidia32183 Actinidia chinensis HOM05D002969 ORTHO05D003308 1.7e-26 125.9 111 50.5
Solyc09g009800.3 Solanum lycopersicum HOM05D002969 ORTHO05D003308 1.7e-26 125.9 314 33.1
AUR62010285 Chenopodium quinoa HOM05D002969 ORTHO05D003308 2.2e-26 125.6 199 37.7
CANSAT54G2721 Cannabis sativa HOM05D002969 ORTHO05D003308 3.7e-26 124.8 138 45.7
Peaxi162Scf00559g00315 Petunia axillaris HOM05D002969 ORTHO05D003308 4.9e-26 124.4 193 38.9
SEGI_13450 Sequoiadendron giganteum HOM05D009756 ORTHO05D011582 6.4e-26 124.0 141 48.2
TPR.G14707 Trifolium pratense HOM05D002969 ORTHO05D003308 6.4e-26 124.0 274 32.1
SGA_v2.0_scaffold71G23857 Striga asiatica HOM05D002969 ORTHO05D003308 8.3e-26 123.6 111 52.3
THA.LOC104813957 Tarenaya hassleriana HOM05D002969 ORTHO05D003308 1.1e-25 123.2 274 32.5
AL2G17610 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 1.4e-25 122.9 267 32.6
MSTRG.10956 Avicennia marina HOM05D002969 ORTHO05D003308 1.4e-25 122.9 120 48.3
SEGI_28131 Sequoiadendron giganteum HOM05D000037 ORTHO05D000608 1.4e-25 122.9 67 88.1
Lsat_1_v5_gn_5_75740 Lactuca sativa HOM05D002969 ORTHO05D003308 2.4e-25 122.1 113 51.3
MD09G1184300 Malus domestica HOM05D002969 ORTHO05D003308 2.4e-25 122.1 112 48.2
Medtr3g005240 Medicago truncatula HOM05D002969 ORTHO05D003308 2.4e-25 122.1 112 50.0
COL.COLO4_27975 Corchorus olitorius HOM05D002969 ORTHO05D003308 3.2e-25 121.7 192 38.0
Glyma.16G219900 Glycine max HOM05D002969 ORTHO05D003308 5.4e-25 120.9 272 32.0
PGSC0003DMG401008881 Solanum tuberosum HOM05D002969 ORTHO05D003308 5.4e-25 120.9 307 32.2
arahy.Tifrunner.gnm1.ann1.8DY1VB Arachis hypogaea HOM05D002969 ORTHO05D003308 7.0e-25 120.6 111 49.5
CAN.G397.51 Capsicum annuum HOM05D002969 ORTHO05D003308 7.0e-25 120.6 332 31.0
Ca_13957_v3 Cicer arietinum L. HOM05D002969 ORTHO05D003308 7.0e-25 120.6 292 30.8
Lalb_Chr10g0094641 Lupinus albus HOM05D002969 ORTHO05D003308 9.2e-25 120.2 132 41.7
Potri.003G064000 Populus trichocarpa HOM05D002969 ORTHO05D003308 9.2e-25 120.2 166 39.8
SEGI_20472 Sequoiadendron giganteum HOM05D009756 ORTHO05D011582 9.2e-25 120.2 128 50.8
TWI31G0668 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 1.2e-24 119.8 304 31.9
AT1G58766 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 2.0e-24 119.0 267 32.2
AT1G59077 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 2.0e-24 119.0 267 32.2
AT1G59453 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 2.0e-24 119.0 267 32.2
PGR102G0955 Punica granatum HOM05D002969 ORTHO05D003308 2.0e-24 119.0 305 32.1
Sp3g22890 Schrenkiella parvula HOM05D002969 ORTHO05D003308 4.6e-24 117.9 269 30.5
arahy.Tifrunner.gnm1.ann1.MA4BJF Arachis hypogaea HOM05D002969 ORTHO05D003308 6.0e-24 117.5 111 48.6
Glyma.19G263900 Glycine max HOM05D002969 ORTHO05D003308 6.0e-24 117.5 125 43.2
SalBow6G7155 Salvia bowleyana HOM05D002969 ORTHO05D003308 7.8e-24 117.1 190 39.5
Glyma.02G000100 Glycine max HOM05D002969 ORTHO05D003308 1.3e-23 116.3 125 43.2
SEGI_20285 Sequoiadendron giganteum HOM05D005888 ORTHO05D007791 1.3e-23 116.3 107 52.3
Sabra03G0037600 Salix brachista HOM05D002969 ORTHO05D003308 3.0e-23 115.2 165 39.4
Carub.0002s0593 Capsella rubella HOM05D002969 ORTHO05D003308 5.0e-23 114.4 149 40.9
TPR.G25535 Trifolium pratense HOM05D002969 ORTHO05D003308 5.0e-23 114.4 272 30.9
Aa31LG7G2260 Aethionema arabicum HOM05D002969 ORTHO05D003308 6.6e-23 114.0 168 36.9
Thhalv10017997m.g Eutrema salsugineum HOM05D002969 ORTHO05D003308 8.6e-23 113.6 273 29.7
HanXRQChr10g0301861 Helianthus annuus HOM05D002969 ORTHO05D003308 8.6e-23 113.6 119 47.1
MD11G1308600 Malus domestica HOM05D002969 ORTHO05D003308 8.6e-23 113.6 111 47.7
Carub.0001s1721 Capsella rubella HOM05D002969 ORTHO05D003308 1.5e-22 112.8 194 37.1
AL1G29730 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 1.9e-22 112.5 192 36.5
DCAR_016128 Daucus carota HOM05D002969 ORTHO05D003308 1.9e-22 112.5 137 43.1
CDE02G2049 Ceratophyllum demersum HOM05D002969 ORTHO05D003308 2.5e-22 112.1 287 29.3
BcaC06g34331 Brassica carinata HOM05D002969 ORTHO05D003308 3.3e-22 111.7 147 40.8
C07p30270 Brassica napus HOM05D002969 ORTHO05D003308 3.3e-22 111.7 104 51.9
BolC7t43569H Brassica oleracea HOM05D002969 ORTHO05D003308 3.3e-22 111.7 147 40.8
Pp3c4_16500 Physcomitrium patens HOM05D002969 ORTHO05D003308 3.3e-22 111.7 307 29.6
A07p07070 Brassica napus HOM05D002969 ORTHO05D003308 4.3e-22 111.3 314 30.9
Duzib235G1299 Durio zibethinus HOM05D002969 ORTHO05D003308 4.3e-22 111.3 272 32.0
Migut.I01069 Erythranthe guttata HOM05D002969 ORTHO05D003308 4.3e-22 111.3 111 48.6
FAN02G4452 Fragaria x ananassa HOM05D002969 ORTHO05D003308 4.3e-22 111.3 167 38.3
Haze_15990 Corylus avellana HOM05D002969 ORTHO05D003308 5.6e-22 110.9 127 45.7
Phvul.011G011400 Phaseolus vulgaris HOM05D002969 ORTHO05D003308 5.6e-22 110.9 125 40.8
Rhsim08G0238100 Rhododendron simsii HOM05D002969 ORTHO05D003308 5.6e-22 110.9 324 30.6
Lj3g0017600 Lotus japonicus HOM05D002969 ORTHO05D003308 7.3e-22 110.5 112 47.3
Cfa003558 Carpinus fangiana HOM05D002969 ORTHO05D003308 1.2e-21 109.8 121 47.1
SEGI_15451 Sequoiadendron giganteum HOM05D009756 ORTHO05D011582 1.2e-21 109.8 174 35.1
Phvul.007G234600 Phaseolus vulgaris HOM05D002969 ORTHO05D003308 2.1e-21 109.0 124 39.5
Peaxi162Scf00068g02519 Petunia axillaris HOM05D002969 ORTHO05D003308 2.8e-21 108.6 289 30.1
AT1G17450 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 3.6e-21 108.2 104 49.0
Lsat_1_v5_gn_1_38040 Lactuca sativa HOM05D002969 ORTHO05D003308 3.6e-21 108.2 140 41.4
Prupe.8G262800 Prunus persica HOM05D002969 ORTHO05D003308 4.7e-21 107.8 112 46.4
BcaB06g26734 Brassica carinata HOM05D002969 ORTHO05D003308 1.4e-20 106.3 317 28.1
CARHR018040 Cardamine hirsuta HOM05D002969 ORTHO05D003308 1.8e-20 105.9 147 39.5
DCAR_022697 Daucus carota HOM05D002969 ORTHO05D003308 2.3e-20 105.5 328 25.6
ECA247G3059 Erigeron canadensis HOM05D002969 ORTHO05D003308 2.3e-20 105.5 249 30.9
Mapoly0002s0195 Marchantia polymorpha HOM05D002969 ORTHO05D003308 2.3e-20 105.5 113 46.9
Os02g0633100 Oryza sativa ssp. japonica HOM05D002969 ORTHO05D003308 2.3e-20 105.5 110 41.8
Nitab4.5_0000794g0160 Nicotiana tabacum HOM05D002969 ORTHO05D003308 6.8e-20 104.0 282 29.8
Aqoxy4G01957 Aquilegia oxysepala HOM05D002969 ORTHO05D003308 8.9e-20 103.6 113 46.0
RcHm_v2.0_Chr6g0291551 Rosa chinensis HOM05D002969 ORTHO05D003308 3.4e-19 101.7 178 33.1
EL10Ac9g22289 Beta vulgaris HOM05D002969 ORTHO05D003308 3.7e-18 98.2 112 46.4
Cfa003537 Carpinus fangiana HOM05D002969 ORTHO05D003308 1.1e-17 96.7 262 33.6
FAN15G1247 Fragaria x ananassa HOM05D002969 ORTHO05D003308 2.4e-17 95.5 118 41.5
SMO119G0293 Selaginella moellendorffii HOM05D002969 ORTHO05D003308 2.4e-17 95.5 113 41.6
Atru.chr4.3098 Acer truncatum HOM05D002969 ORTHO05D003308 3.2e-17 95.1 152 37.5
SEGI_17900 Sequoiadendron giganteum HOM05D000129 ORTHO05D000997 3.2e-17 95.1 612 23.9
AUR62039104 Chenopodium quinoa HOM05D002969 ORTHO05D003308 5.4e-17 94.4 154 37.7
HPP92_011314 Vanilla planifolia HOM05D002969 ORTHO05D003308 1.2e-16 93.2 257 28.0
TWI31G0627 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 1.6e-16 92.8 157 37.6
SEGI_05499 Sequoiadendron giganteum HOM05D009756 ORTHO05D011582 3.5e-16 91.7 48 91.7
ECA240G4395 Erigeron canadensis HOM05D002969 ORTHO05D003308 4.6e-16 91.3 381 25.2
FvH4_2g23920 Fragaria vesca HOM05D002969 ORTHO05D003308 7.8e-16 90.5 118 40.7
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 7.8e-16 90.5 62 64.5
FAN24G1542 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.7e-15 89.4 118 39.8
Zm00001eb254630 Zea mays HOM05D002969 ORTHO05D003308 5.1e-15 87.8 95 42.1
ATR0618G078 Amborella trichopoda HOM05D002969 ORTHO05D003308 1.9e-14 85.9 210 31.9
FAN27G1917 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.9e-14 85.9 118 38.1
BcaC06g35804 Brassica carinata HOM05D002969 ORTHO05D003308 9.5e-14 83.6 289 28.4
SMO196G0130 Selaginella moellendorffii HOM05D002969 ORTHO05D003308 1.2e-13 83.2 142 35.9
Duzib192G0334 Durio zibethinus HOM05D002969 ORTHO05D003308 8.1e-13 80.5 103 36.9
SEGI_40694 Sequoiadendron giganteum HOM05D001367 ORTHO05D002514 5.2e-12 77.8 140 40.0
MBI06_g44919_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 1.5e-11 76.3 251 27.5
Peaxi162Scf00006g00026 Petunia axillaris HOM05D002969 ORTHO05D003308 2.6e-11 75.5 66 57.6
SEGI_23394 Sequoiadendron giganteum HOM05D000002 ORTHO05D387127 4.4e-11 74.7 199 33.2
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 7.6e-11 73.9 76 44.7
PSO700G0258 Papaver somniferum HOM05D002969 ORTHO05D003308 7.6e-11 73.9 122 38.5
SEGI_08959 Sequoiadendron giganteum HOM05D001826 ORTHO05D007448 4.9e-10 71.2 158 32.9
SEGI_28699 Sequoiadendron giganteum HOM05D001826 ORTHO05D007448 4.9e-10 71.2 158 32.9
BraA07t28494Z Brassica rapa HOM05D002969 ORTHO05D003308 6.4e-10 70.9 260 27.7
Cpa.g.sc34.70 Carica papaya HOM05D002969 ORTHO05D003308 6.4e-10 70.9 50 58.0
Ah.01g018170 Amaranthus hybridus HOM05D002969 ORTHO05D003308 1.1e-09 70.1 77 49.4
BolC7t41532H Brassica oleracea HOM05D002969 ORTHO05D003308 3.2e-09 68.6 260 27.3
Ah.01g009920 Amaranthus hybridus HOM05D002969 ORTHO05D003308 4.1e-09 68.2 56 50.0
Gorai.010G233800 Gossypium raimondii HOM05D002969 ORTHO05D003308 3.5e-08 65.1 164 29.3
Medtr8g062660 Medicago truncatula HOM05D000007 ORTHO05D003308 3.5e-08 65.1 87 39.1
Migut.E00647 Erythranthe guttata HOM05D002969 ORTHO05D003308 6.0e-08 64.3 106 35.8
Thecc.06G115400 Theobroma cacao HOM05D002969 ORTHO05D003308 7.8e-08 63.9 143 29.4
Gohir.D06G200300 Gossypium hirsutum HOM05D002969 ORTHO05D003308 1.0e-07 63.5 164 28.7
SEGI_30750 Sequoiadendron giganteum HOM05D009756 ORTHO05D011582 1.0e-07 63.5 34 91.2
SEGI_00527 Sequoiadendron giganteum HOM05D016871 ORTHO05D010073 1.7e-07 62.8 100 35.0
SEGI_24005 Sequoiadendron giganteum HOM05D000762 ORTHO05D002234 6.6e-07 60.8 40 80.0
Nitab4.5_0010825g0010 Nicotiana tabacum HOM05D002969 ORTHO05D003308 1.5e-06 59.7 73 43.8
SEGI_13519 Sequoiadendron giganteum HOM05D001637 ORTHO05D002178 1.5e-06 59.7 99 37.4
Sc18g0005650 Simmondsia chinensis HOM05D002969 ORTHO05D003308 3.3e-06 58.5 120 30.8


User provided reference genes

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