Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00791 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 2.2e-88 328.9 167 100.0
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 2.0e-65 252.7 154 80.5
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 5.8e-65 251.1 154 79.9
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 3.8e-64 248.4 154 80.5
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 8.4e-64 247.3 154 79.2
TAR381G1106 Trochodendron aralioides HOM05D005490 ORTHO05D006606 1.4e-63 246.5 154 79.2
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 3.2e-63 245.4 154 77.3
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 3.2e-63 245.4 154 77.3
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 3.2e-63 245.4 154 77.9
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 3.2e-63 245.4 154 77.3
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 7.1e-63 244.2 154 77.3
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 7.1e-63 244.2 154 76.6
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 7.1e-63 244.2 154 76.6
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 9.3e-63 243.8 154 77.9
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 1.2e-62 243.4 154 76.6
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 1.6e-62 243.0 153 78.4
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 2.1e-62 242.7 154 79.2
MD02G1172000 Malus domestica HOM05D005490 ORTHO05D006606 3.5e-62 241.9 154 79.2
Mapoly0012s0107 Marchantia polymorpha HOM05D005490 ORTHO05D006606 3.5e-62 241.9 154 75.3
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 6.0e-62 241.1 154 76.6
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 6.0e-62 241.1 154 76.0
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 6.0e-62 241.1 154 75.3
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 7.9e-62 240.7 154 76.6
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 7.9e-62 240.7 154 77.3
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 1.0e-61 240.4 154 77.9
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 1.0e-61 240.4 154 77.9
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 1.3e-61 240.0 154 76.0
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 1.3e-61 240.0 154 77.9
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 2.3e-61 239.2 154 74.0
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 2.3e-61 239.2 154 77.9
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 3.9e-61 238.4 154 76.0
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 5.1e-61 238.0 153 77.1
Aqoxy5G01229 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 1.5e-60 236.5 154 76.6
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 3.3e-60 235.3 154 74.7
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 5.6e-60 234.6 154 76.6
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 5.6e-60 234.6 154 77.3
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 7.4e-60 234.2 153 76.5
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 7.4e-60 234.2 154 74.7
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 7.4e-60 234.2 154 76.0
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 9.6e-60 233.8 154 76.6
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 9.6e-60 233.8 154 76.6
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 9.6e-60 233.8 154 74.7
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 1.3e-59 233.4 154 73.4
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 2.1e-59 232.6 154 73.4
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 2.8e-59 232.3 154 76.0
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 2.8e-59 232.3 154 76.0
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 3.7e-59 231.9 154 76.6
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 4.8e-59 231.5 154 76.0
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 4.8e-59 231.5 154 76.0
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 8.1e-59 230.7 162 72.2
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 8.1e-59 230.7 154 74.7
FAN26G0668 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.4e-58 229.9 168 70.8
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 1.4e-58 229.9 158 74.7
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 1.4e-58 229.9 154 76.6
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 1.4e-58 229.9 165 70.9
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 1.8e-58 229.6 154 76.0
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 1.8e-58 229.6 154 74.0
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 2.4e-58 229.2 168 70.8
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 2.4e-58 229.2 154 76.0
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 2.4e-58 229.2 150 75.3
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 3.1e-58 228.8 154 74.7
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 4.0e-58 228.4 168 70.8
FAN23G2111 Fragaria x ananassa HOM05D005490 ORTHO05D006606 5.3e-58 228.0 168 70.2
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 6.9e-58 227.6 153 74.5
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 9.0e-58 227.3 145 77.9
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 1.5e-57 226.5 149 75.2
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 1.5e-57 226.5 153 72.5
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 2.0e-57 226.1 156 73.7
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 3.4e-57 225.3 179 65.9
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 4.5e-57 224.9 153 74.5
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 5.8e-57 224.6 148 73.6
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 7.6e-57 224.2 156 73.7
Potri.005G138200 Populus trichocarpa HOM05D005490 ORTHO05D006606 7.6e-57 224.2 151 74.8
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 1.3e-56 223.4 149 74.5
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 1.7e-56 223.0 149 73.8
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 2.9e-56 222.2 149 73.8
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 2.9e-56 222.2 149 74.5
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 2.9e-56 222.2 154 71.4
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 4.9e-56 221.5 149 73.2
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 6.4e-56 221.1 149 72.5
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 6.4e-56 221.1 149 72.5
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 6.4e-56 221.1 149 73.2
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.4e-55 219.9 154 70.8
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 3.2e-55 218.8 149 72.5
Pp3c7_5520 Physcomitrium patens HOM05D005490 ORTHO05D006606 7.1e-55 217.6 156 69.2
Pp3c11_20900 Physcomitrium patens HOM05D005490 ORTHO05D006606 1.6e-54 216.5 156 67.9
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 4.6e-54 214.9 154 68.8
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 6.0e-54 214.5 154 69.5
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 1.0e-53 213.8 150 71.3
SMO356G0652 Selaginella moellendorffii HOM05D005490 ORTHO05D006606 6.7e-53 211.1 156 71.8
Atru.chr3.328 Acer truncatum HOM05D005490 ORTHO05D006606 8.7e-53 210.7 128 79.7
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 1.9e-52 209.5 154 70.8
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 2.5e-52 209.1 133 75.9
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 5.6e-52 208.0 160 66.9
Cpa.g.sc55.148 Carica papaya HOM05D005490 ORTHO05D006606 5.6e-52 208.0 128 79.7
unitig_899.g14662 Utricularia gibba HOM05D005490 ORTHO05D006606 1.8e-50 203.0 158 67.7
MD15G1284200 Malus domestica HOM05D005490 ORTHO05D006606 5.8e-49 198.0 128 78.9
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 1.3e-48 196.8 154 66.9
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 5.9e-41 171.4 153 60.8
Actinidia16484 Actinidia chinensis HOM05D005490 ORTHO05D006606 3.7e-35 152.1 84 84.5
AagrBONN_evm.TU.Sc2ySwM_344.4468 Anthoceros agrestis HOM05D005490 ORTHO05D006606 1.1e-28 130.6 111 57.7
Ah.03g145080 Amaranthus hybridus HOM05D005490 ORTHO05D006606 1.7e-27 126.7 79 75.9
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 3.6e-22 109.0 163 42.9
FAN22G1581 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.5e-20 103.6 72 70.8
SHI08459 Sapria himalayana HOM05D005490 ORTHO05D006606 5.7e-20 101.7 66 75.8
FAN17G2271 Fragaria x ananassa HOM05D005490 ORTHO05D006606 4.8e-19 98.6 66 74.2
Actinidia36493 Actinidia chinensis HOM05D005490 ORTHO05D006606 9.1e-18 94.4 60 71.7
FAN17G1267 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.0e-16 90.9 64 75.0
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 5.0e-16 88.6 140 41.4
CBR_g38045 Chara braunii HOM05D005490 ORTHO05D000004 8.0e-14 81.3 55 72.7
Cre12.g498350 Chlamydomonas reinhardtii HOM05D005490 ORTHO05D006606 4.4e-12 75.5 140 34.3
Atru.chr10.1611 Acer truncatum HOM05D005490 ORTHO05D006606 3.1e-10 69.3 50 68.0
CDE08G1038 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 5.9e-09 65.1 38 76.3
VMungo0720G1861 Vigna mungo HOM05D005490 ORTHO05D006606 7.7e-09 64.7 75 53.3
VMungo1309G0325 Vigna mungo HOM05D005490 ORTHO05D006606 3.8e-08 62.4 49 69.4


User provided reference genes

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