Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00784 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 4.0e-44 181.0 91 100.0
SEGI_37322 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 5.6e-38 160.6 83 94.0
Nn7g36895 Nelumbo nucifera HOM05D004500 ORTHO05D005775 4.2e-25 117.9 84 63.1
Hma1.2p1_0460F.1_g157660 Hydrangea macrophylla HOM05D004500 ORTHO05D005775 5.5e-25 117.5 84 65.5
MBI19_g07497_MAGBIO Magnolia biondii HOM05D004500 ORTHO05D005775 4.6e-24 114.4 84 63.1
ATR0307G114 Amborella trichopoda HOM05D004500 ORTHO05D005775 3.9e-23 111.3 83 62.7
Gohir.D09G105200 Gossypium hirsutum HOM05D004500 ORTHO05D005775 1.5e-22 109.4 84 57.1
Gorai.006G122400 Gossypium raimondii HOM05D004500 ORTHO05D005775 1.5e-22 109.4 84 57.1
Duzib168G0672 Durio zibethinus HOM05D004500 ORTHO05D005775 2.5e-22 108.6 84 58.3
TAR623G1318 Trochodendron aralioides HOM05D004500 ORTHO05D005775 3.3e-22 108.2 84 60.7
Aqoxy1G00409 Aquilegia oxysepala HOM05D004500 ORTHO05D005775 5.7e-22 107.5 84 59.5
COL.COLO4_06618 Corchorus olitorius HOM05D004500 ORTHO05D005775 7.4e-22 107.1 84 57.1
Dinv22199 Davidia involucrata HOM05D004500 ORTHO05D005775 7.4e-22 107.1 84 61.9
Cfa009915 Carpinus fangiana HOM05D004500 ORTHO05D005775 1.3e-21 106.3 84 56.0
CANSAT54G2073 Cannabis sativa HOM05D004500 ORTHO05D005775 1.6e-21 105.9 84 57.1
GSVIVG01037358001 Vitis vinifera HOM05D004500 ORTHO05D005775 1.6e-21 105.9 84 59.5
CSS0026558 Camellia sinensis var. sinensis HOM05D004500 ORTHO05D005775 3.7e-21 104.8 84 57.1
Phvul.008G203200 Phaseolus vulgaris HOM05D004500 ORTHO05D005775 4.8e-21 104.4 84 54.8
QL01p016442 Quercus lobata HOM05D004500 ORTHO05D005775 4.8e-21 104.4 84 53.6
VMungo0647G1179 Vigna mungo HOM05D004500 ORTHO05D005775 6.3e-21 104.0 84 54.8
Glyma.14G036800 Glycine max HOM05D004500 ORTHO05D005775 8.2e-21 103.6 84 54.8
Lsat_1_v5_gn_5_70881 Lactuca sativa HOM05D004500 ORTHO05D005775 8.2e-21 103.6 84 57.1
Sabra16G0169000 Salix brachista HOM05D004500 ORTHO05D005775 1.1e-20 103.2 84 57.1
Potri.001G274500 Populus trichocarpa HOM05D004500 ORTHO05D005775 1.4e-20 102.8 84 58.3
SalBow6G2693 Salvia bowleyana HOM05D004500 ORTHO05D005775 1.4e-20 102.8 84 58.3
Actinidia06989 Actinidia chinensis HOM05D004500 ORTHO05D005775 2.4e-20 102.1 84 57.1
ECA233G3879 Erigeron canadensis HOM05D004500 ORTHO05D005775 2.4e-20 102.1 84 56.0
Migut.D00681 Erythranthe guttata HOM05D004500 ORTHO05D005775 4.1e-20 101.3 84 58.3
Lalb_Chr10g0106121 Lupinus albus HOM05D004500 ORTHO05D005775 4.1e-20 101.3 84 54.8
Aa31LG5G9010 Aethionema arabicum HOM05D004500 ORTHO05D005775 5.3e-20 100.9 84 54.8
arahy.Tifrunner.gnm1.ann1.G3VBDM Arachis hypogaea HOM05D004500 ORTHO05D005775 5.3e-20 100.9 84 53.6
arahy.Tifrunner.gnm1.ann1.VEQ9JC Arachis hypogaea HOM05D004500 ORTHO05D005775 5.3e-20 100.9 84 53.6
Rhsim13G0205000 Rhododendron simsii HOM05D004500 ORTHO05D005775 5.3e-20 100.9 84 56.0
Hund07422 Selenicereus undatus HOM05D004500 ORTHO05D005775 5.3e-20 100.9 84 53.6
SGA_v2.0_scaffold29G12209 Striga asiatica HOM05D004500 ORTHO05D005775 5.3e-20 100.9 84 58.3
Eucgr.J00673 Eucalyptus grandis HOM05D004500 ORTHO05D005775 6.9e-20 100.5 84 56.0
Nitab4.5_0002026g0160 Nicotiana tabacum HOM05D004500 ORTHO05D005775 6.9e-20 100.5 84 52.4
Ca_06188_v3 Cicer arietinum L. HOM05D004500 ORTHO05D005775 9.0e-20 100.1 84 52.4
Thhalv10011180m.g Eutrema salsugineum HOM05D004500 ORTHO05D005775 9.0e-20 100.1 84 53.6
Manes.02G138300 Manihot esculenta HOM05D004500 ORTHO05D005775 9.0e-20 100.1 84 53.6
CiPaw.13G147900 Carya illinoinensis HOM05D004500 ORTHO05D005775 1.2e-19 99.8 84 56.0
Ciclev10014018m.g Citrus clementina HOM05D004500 ORTHO05D005775 1.2e-19 99.8 84 56.0
Nitab4.5_0000492g0190 Nicotiana tabacum HOM05D004500 ORTHO05D005775 1.2e-19 99.8 84 52.4
Oeu061692.5 Olea europaea HOM05D004500 ORTHO05D005775 1.2e-19 99.8 84 54.8
RcHm_v2.0_Chr5g0051931 Rosa chinensis HOM05D004500 ORTHO05D005775 1.2e-19 99.8 84 51.2
LjContig00564g0025272 Lotus japonicus HOM05D004500 ORTHO05D005775 1.5e-19 99.4 84 51.2
Psat0s2305g0080 Pisum sativum HOM05D004500 ORTHO05D005775 1.5e-19 99.4 84 52.4
Sopen11g024300 Solanum pennellii HOM05D004500 ORTHO05D005775 1.5e-19 99.4 84 53.6
Zm00001eb196280 Zea mays HOM05D004500 ORTHO05D005775 1.5e-19 99.4 83 51.8
Carub.0004s0721 Capsella rubella HOM05D004500 ORTHO05D005775 2.0e-19 99.0 84 53.6
MELO3C014542.2 Cucumis melo HOM05D004500 ORTHO05D005775 2.0e-19 99.0 84 56.0
CsaV3_6G038790 Cucumis sativus L. HOM05D004500 ORTHO05D005775 2.0e-19 99.0 84 56.0
HanXRQChr12g0380331 Helianthus annuus HOM05D004500 ORTHO05D005775 2.0e-19 99.0 84 54.8
Peaxi162Scf00029g02523 Petunia axillaris HOM05D004500 ORTHO05D005775 2.0e-19 99.0 84 51.2
Solyc11g062320.2 Solanum lycopersicum HOM05D004500 ORTHO05D005775 2.0e-19 99.0 84 53.6
Pp3c1_28010 Physcomitrium patens HOM05D004500 ORTHO05D005775 2.6e-19 98.6 83 53.0
TPR.G16395 Trifolium pratense HOM05D004500 ORTHO05D005775 2.6e-19 98.6 84 51.2
Medtr5g089000 Medicago truncatula HOM05D004500 ORTHO05D005775 3.4e-19 98.2 84 51.2
Prupe.4G270300 Prunus persica HOM05D004500 ORTHO05D005775 3.4e-19 98.2 84 51.2
Sp1g40640 Schrenkiella parvula HOM05D004500 ORTHO05D005775 3.4e-19 98.2 84 52.4
AT2G26780 Arabidopsis thaliana HOM05D004500 ORTHO05D005775 4.5e-19 97.8 84 53.6
RcHm_v2.0_Chr5g0051871 Rosa chinensis HOM05D004500 ORTHO05D005775 4.5e-19 97.8 84 51.2
AagrBONN_evm.TU.Sc2ySwM_117.694 Anthoceros agrestis HOM05D004500 ORTHO05D005775 5.9e-19 97.4 83 54.2
FvH4_3g28920 Fragaria vesca HOM05D004500 ORTHO05D005775 5.9e-19 97.4 84 50.0
FAN11G1622 Fragaria x ananassa HOM05D004500 ORTHO05D005775 5.9e-19 97.4 84 50.0
AL4G19970 Arabidopsis lyrata HOM05D004500 ORTHO05D005775 7.6e-19 97.1 84 53.6
MSTRG.21337 Avicennia marina HOM05D004500 ORTHO05D005775 7.6e-19 97.1 83 50.6
CAN.G1050.5 Capsicum annuum HOM05D004500 ORTHO05D005775 7.6e-19 97.1 84 51.2
FAN21G1747 Fragaria x ananassa HOM05D004500 ORTHO05D005775 7.6e-19 97.1 84 50.0
THA.LOC104800461 Tarenaya hassleriana HOM05D004500 ORTHO05D005775 7.6e-19 97.1 84 54.8
Sc09g0001130 Simmondsia chinensis HOM05D004500 ORTHO05D005775 1.0e-18 96.7 84 52.4
CARHR118960 Cardamine hirsuta HOM05D004500 ORTHO05D005775 1.3e-18 96.3 84 52.4
Haze_23272 Corylus avellana HOM05D004500 ORTHO05D005775 1.3e-18 96.3 77 55.8
Atru.chr3.2854 Acer truncatum HOM05D004500 ORTHO05D005775 1.7e-18 95.9 84 51.2
A08p01100 Brassica napus HOM05D004500 ORTHO05D005775 1.7e-18 95.9 84 50.0
Cc01_g06520 Coffea canephora HOM05D004500 ORTHO05D005775 1.7e-18 95.9 87 50.6
C03p92100 Brassica napus HOM05D004500 ORTHO05D005775 2.2e-18 95.5 84 50.0
BolC3t21527H Brassica oleracea HOM05D004500 ORTHO05D005775 2.2e-18 95.5 84 50.0
BraA08t32166Z Brassica rapa HOM05D004500 ORTHO05D005775 2.2e-18 95.5 84 50.0
FAN21G2043 Fragaria x ananassa HOM05D004500 ORTHO05D005775 2.2e-18 95.5 84 50.0
Atru.chr3.2856 Acer truncatum HOM05D004500 ORTHO05D005775 2.9e-18 95.1 84 51.2
Sed0001243 Sechium edule HOM05D004500 ORTHO05D005775 3.8e-18 94.7 84 53.6
BcaB04g17016 Brassica carinata HOM05D004500 ORTHO05D005775 5.0e-18 94.4 84 48.8
FAN25G3650 Fragaria x ananassa HOM05D004500 ORTHO05D005775 5.0e-18 94.4 84 48.8
EL10Ac4g10085 Beta vulgaris HOM05D004500 ORTHO05D005775 6.5e-18 94.0 84 51.2
BcaC01g01445 Brassica carinata HOM05D004500 ORTHO05D005775 6.5e-18 94.0 80 51.2
ClCG02G022670 Citrullus lanatus HOM05D004500 ORTHO05D005775 6.5e-18 94.0 97 49.5
AUR62000221 Chenopodium quinoa HOM05D004500 ORTHO05D005775 8.5e-18 93.6 84 48.8
AUR62006566 Chenopodium quinoa HOM05D004500 ORTHO05D005775 8.5e-18 93.6 84 48.8
CDE02G1339 Ceratophyllum demersum HOM05D004500 ORTHO05D005775 1.1e-17 93.2 84 52.4
MD03G1157000 Malus domestica HOM05D004500 ORTHO05D005775 1.1e-17 93.2 84 47.6
TWI75G0701 Tripterygium wilfordii HOM05D004500 ORTHO05D005775 1.1e-17 93.2 84 50.0
Os11g0137300 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 1.4e-17 92.8 83 50.6
SMO228G0054 Selaginella moellendorffii HOM05D004500 ORTHO05D005775 3.2e-17 91.7 83 54.2
vmacro04083 Vaccinium macrocarpon HOM05D004500 ORTHO05D005775 7.2e-17 90.5 92 50.0
EL10Ac5g11937 Beta vulgaris HOM05D004500 ORTHO05D005775 4.6e-16 87.8 84 48.8
unitig_578.g16660 Utricularia gibba HOM05D004500 ORTHO05D005775 2.3e-15 85.5 84 46.4
Mapoly0009s0155 Marchantia polymorpha HOM05D004500 ORTHO05D005775 5.1e-15 84.3 83 48.2
CBR_g37490 Chara braunii HOM05D004500 ORTHO05D005775 1.1e-14 83.2 78 52.6
PSO339G2400 Papaver somniferum HOM05D004500 ORTHO05D005775 9.1e-12 73.6 53 62.3
Cre04.g217935 Chlamydomonas reinhardtii HOM05D004500 ORTHO05D005775 5.0e-10 67.8 90 42.2
Os12g0148400 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 6.5e-10 67.4 76 42.1
Thhalv10012226m.g Eutrema salsugineum HOM05D004500 ORTHO05D005775 1.1e-09 66.6 84 41.7
PRCOL_00001646 Prasinoderma coloniale HOM05D004500 ORTHO05D005775 3.2e-09 65.1 79 43.0
EL10Ac5g12062 Beta vulgaris HOM05D004500 ORTHO05D005775 7.2e-09 63.9 60 50.0
MCO04G062 Micromonas commoda HOM05D004500 ORTHO05D005775 1.4e-07 59.7 83 33.7
HPP92_022829 Vanilla planifolia HOM05D004500 ORTHO05D005775 5.7e-06 54.3 39 61.5


User provided reference genes

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