Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00698 Sequoiadendron giganteum HOM05D005346 ORTHO05D007051 5.0e-102 374.4 185 100.0
SEGI_23485 Sequoiadendron giganteum HOM05D005346 ORTHO05D007051 1.1e-27 127.5 78 83.3
DCAR_006800 Daucus carota HOM05D005346 ORTHO05D007051 4.7e-23 112.1 110 55.5
Dinv39076 Davidia involucrata HOM05D005346 ORTHO05D007051 2.3e-22 109.8 82 69.5
SalBow6G4970 Salvia bowleyana HOM05D005346 ORTHO05D007051 4.0e-22 109.0 82 68.3
MSTRG.25547 Avicennia marina HOM05D005346 ORTHO05D007051 6.7e-22 108.2 82 67.1
Lj8A255T54 Lonicera japonica HOM05D005346 ORTHO05D007051 8.8e-22 107.8 82 65.9
CSS0047104 Camellia sinensis var. sinensis HOM05D005346 ORTHO05D007051 1.5e-21 107.1 82 65.9
Pp3c9_5680 Physcomitrium patens HOM05D005346 ORTHO05D007051 1.5e-21 107.1 78 64.1
Nitab4.5_0012948g0030 Nicotiana tabacum HOM05D005346 ORTHO05D007051 2.6e-21 106.3 82 64.6
Actinidia02088 Actinidia chinensis HOM05D005346 ORTHO05D007051 3.3e-21 105.9 82 63.4
Rhsim07G0101400 Rhododendron simsii HOM05D005346 ORTHO05D007051 4.4e-21 105.5 82 65.9
CAN.G630.80 Capsicum annuum HOM05D005346 ORTHO05D007051 5.7e-21 105.1 82 63.4
Cc08_g13250 Coffea canephora HOM05D005346 ORTHO05D007051 5.7e-21 105.1 82 63.4
CSS0010264 Camellia sinensis var. sinensis HOM05D005346 ORTHO05D007051 7.5e-21 104.8 76 69.7
Peaxi162Scf00271g00130 Petunia axillaris HOM05D005346 ORTHO05D007051 7.5e-21 104.8 82 63.4
Solyc08g079490.4 Solanum lycopersicum HOM05D005346 ORTHO05D007051 1.7e-20 103.6 82 63.4
Sopen08g027860 Solanum pennellii HOM05D005346 ORTHO05D007051 1.7e-20 103.6 82 63.4
Cfa012017 Carpinus fangiana HOM05D005346 ORTHO05D007051 2.2e-20 103.2 82 64.6
Haze_09052 Corylus avellana HOM05D005346 ORTHO05D007051 2.2e-20 103.2 82 64.6
SGA_v2.0_scaffold120G32813 Striga asiatica HOM05D002260 ORTHO05D000476 2.8e-20 102.8 78 66.7
AUR62017389 Chenopodium quinoa HOM05D005346 ORTHO05D007051 3.7e-20 102.4 76 68.4
Eucgr.E00475 Eucalyptus grandis HOM05D005346 ORTHO05D007051 4.8e-20 102.1 82 67.1
Oeu016508.1 Olea europaea HOM05D005346 ORTHO05D007051 6.3e-20 101.7 82 63.4
Cpa.g.sc29.89 Carica papaya HOM05D005346 ORTHO05D007051 8.2e-20 101.3 82 65.9
SEGI_25852 Sequoiadendron giganteum HOM05D005346 ORTHO05D007051 8.2e-20 101.3 82 63.4
GSVIVG01004909001 Vitis vinifera HOM05D005346 ORTHO05D007051 8.2e-20 101.3 82 67.1
AUR62010513 Chenopodium quinoa HOM05D005346 ORTHO05D007051 1.1e-19 100.9 76 67.1
Migut.E01045 Erythranthe guttata HOM05D005346 ORTHO05D007051 1.1e-19 100.9 92 60.9
ATR0579G161 Amborella trichopoda HOM05D005346 ORTHO05D007051 1.4e-19 100.5 107 54.2
Duzib084G0498 Durio zibethinus HOM05D005346 ORTHO05D007051 1.8e-19 100.1 82 65.9
Gorai.003G166600 Gossypium raimondii HOM05D005346 ORTHO05D007051 4.1e-19 99.0 65 80.0
Potri.003G115300 Populus trichocarpa HOM05D005346 ORTHO05D007051 4.1e-19 99.0 82 64.6
Gohir.A03G011800 Gossypium hirsutum HOM05D005346 ORTHO05D007051 5.3e-19 98.6 65 78.5
Lsat_1_v5_gn_6_9800 Lactuca sativa HOM05D005346 ORTHO05D007051 5.3e-19 98.6 82 59.8
CSS0033087 Camellia sinensis var. sinensis HOM05D005346 ORTHO05D007051 7.0e-19 98.2 89 60.7
MBI12_g34008_MAGBIO Magnolia biondii HOM05D005346 ORTHO05D007051 7.0e-19 98.2 82 65.9
PSO478G1917 Papaver somniferum HOM05D005346 ORTHO05D007051 7.0e-19 98.2 82 61.0
PSO782G1275 Papaver somniferum HOM05D005346 ORTHO05D007051 7.0e-19 98.2 82 61.0
PGR042G0462 Punica granatum HOM05D005346 ORTHO05D007051 7.0e-19 98.2 65 78.5
Ciclev10021953m.g Citrus clementina HOM05D005346 ORTHO05D007051 9.1e-19 97.8 65 78.5
Glyma.05G052900 Glycine max HOM05D005346 ORTHO05D007051 9.1e-19 97.8 81 63.0
Manes.01G073500 Manihot esculenta HOM05D005346 ORTHO05D007051 9.1e-19 97.8 82 63.4
Nn4g26377 Nelumbo nucifera HOM05D005346 ORTHO05D007051 9.1e-19 97.8 82 65.9
Sabra03G0079900 Salix brachista HOM05D005346 ORTHO05D007051 9.1e-19 97.8 82 63.4
Aqoxy7G00648 Aquilegia oxysepala HOM05D005346 ORTHO05D007051 1.2e-18 97.4 65 78.5
HanXRQChr17g0549091 Helianthus annuus HOM05D005346 ORTHO05D007051 1.2e-18 97.4 78 66.7
Atru.chr9.1434 Acer truncatum HOM05D005346 ORTHO05D007051 2.0e-18 96.7 82 63.4
Potri.001G117500 Populus trichocarpa HOM05D005346 ORTHO05D007051 2.0e-18 96.7 82 63.4
CBR_g59652 Chara braunii HOM05D005346 ORTHO05D007051 3.5e-18 95.9 78 61.5
Sc22g0000580 Simmondsia chinensis HOM05D005346 ORTHO05D007051 3.5e-18 95.9 65 76.9
Zm00001eb010680 Zea mays HOM05D005346 ORTHO05D007051 3.5e-18 95.9 82 62.2
CDE11G0613 Ceratophyllum demersum HOM05D005346 ORTHO05D007051 4.5e-18 95.5 65 76.9
TAR629G0356 Trochodendron aralioides HOM05D005346 ORTHO05D007051 4.5e-18 95.5 82 64.6
vmacro14041 Vaccinium macrocarpon HOM05D005346 ORTHO05D007051 4.5e-18 95.5 88 59.1
Lalb_Chr05g0225391 Lupinus albus HOM05D005346 ORTHO05D007051 5.9e-18 95.1 82 61.0
SGA_v2.0_scaffold146G36182 Striga asiatica HOM05D005346 ORTHO05D007051 5.9e-18 95.1 87 58.6
unitig_749.g13414 Utricularia gibba HOM05D005346 ORTHO05D007051 5.9e-18 95.1 88 59.1
CiPaw.12G104700 Carya illinoinensis HOM05D005346 ORTHO05D007051 7.7e-18 94.7 65 75.4
Psat4g068640 Pisum sativum HOM05D005346 ORTHO05D007051 7.7e-18 94.7 82 62.2
Sabra01G0090200 Salix brachista HOM05D005346 ORTHO05D007051 7.7e-18 94.7 65 75.4
THA.LOC104809446 Tarenaya hassleriana HOM05D005346 ORTHO05D007051 7.7e-18 94.7 65 75.4
Ca_12281_v3 Cicer arietinum L. HOM05D002260 ORTHO05D007051 1.0e-17 94.4 78 65.4
Medtr4g102230 Medicago truncatula HOM05D005346 ORTHO05D007051 1.0e-17 94.4 82 61.0
CANSAT21G2498 Cannabis sativa HOM05D005346 ORTHO05D007051 1.3e-17 94.0 65 73.8
Prupe.5G079700 Prunus persica HOM05D005346 ORTHO05D007051 1.3e-17 94.0 65 73.8
MELO3C013984.2 Cucumis melo HOM05D005346 ORTHO05D007051 1.7e-17 93.6 82 61.0
ECA233G1833 Erigeron canadensis HOM05D005346 ORTHO05D007051 1.7e-17 93.6 65 72.3
QL05p030033 Quercus lobata HOM05D005346 ORTHO05D007051 1.7e-17 93.6 65 73.8
QL12p015018 Quercus lobata HOM05D005346 ORTHO05D007051 1.7e-17 93.6 65 73.8
HPP92_003521 Vanilla planifolia HOM05D005346 ORTHO05D007051 1.7e-17 93.6 82 61.0
arahy.Tifrunner.gnm1.ann1.FP1HKG Arachis hypogaea HOM05D005346 ORTHO05D007051 2.2e-17 93.2 65 73.8
BcaB07g31363 Brassica carinata HOM05D005346 ORTHO05D007051 2.2e-17 93.2 65 73.8
BcaC04g22452 Brassica carinata HOM05D005346 ORTHO05D007051 2.2e-17 93.2 65 73.8
A09p15920 Brassica napus HOM05D005346 ORTHO05D007051 2.2e-17 93.2 65 73.8
C09p19170 Brassica napus HOM05D005346 ORTHO05D007051 2.2e-17 93.2 65 73.8
BolC9t54826H Brassica oleracea HOM05D005346 ORTHO05D007051 2.2e-17 93.2 65 73.8
BraA09t37228Z Brassica rapa HOM05D005346 ORTHO05D007051 2.2e-17 93.2 65 73.8
MD04G1079400 Malus domestica HOM05D005346 ORTHO05D007051 2.2e-17 93.2 65 75.4
Mapoly0185s0016 Marchantia polymorpha HOM05D005346 ORTHO05D007051 2.2e-17 93.2 66 69.7
TAR629G0085 Trochodendron aralioides HOM05D005346 ORTHO05D007051 2.2e-17 93.2 65 76.9
EL10Ac5g12617 Beta vulgaris HOM05D005346 ORTHO05D007051 2.9e-17 92.8 65 73.8
Carub.0002s0213 Capsella rubella HOM05D005346 ORTHO05D007051 2.9e-17 92.8 65 73.8
CARHR048890 Cardamine hirsuta HOM05D005346 ORTHO05D007051 2.9e-17 92.8 65 72.3
ClCG10G003160 Citrullus lanatus HOM05D005346 ORTHO05D007051 2.9e-17 92.8 65 73.8
Thhalv10023661m.g Eutrema salsugineum HOM05D005346 ORTHO05D007051 2.9e-17 92.8 65 73.8
Aa31LG2G370 Aethionema arabicum HOM05D005346 ORTHO05D007051 3.8e-17 92.4 65 72.3
FvH4_5g00690 Fragaria vesca HOM05D005346 ORTHO05D007051 6.5e-17 91.7 65 72.3
FAN04G2793 Fragaria x ananassa HOM05D000062 ORTHO05D007051 6.5e-17 91.7 65 72.3
FAN13G0616 Fragaria x ananassa HOM05D005346 ORTHO05D007051 6.5e-17 91.7 65 72.3
RcHm_v2.0_Chr7g0201521 Rosa chinensis HOM05D005346 ORTHO05D007051 6.5e-17 91.7 65 72.3
CsaV3_3G003190 Cucumis sativus L. HOM05D005346 ORTHO05D007051 8.5e-17 91.3 65 72.3
Os03g0249200 Oryza sativa ssp. japonica HOM05D005346 ORTHO05D007051 1.5e-16 90.5 65 70.8
AL2G12910 Arabidopsis lyrata HOM05D005346 ORTHO05D007051 1.9e-16 90.1 65 72.3
Lj4g0017997 Lotus japonicus HOM05D005346 ORTHO05D007051 1.9e-16 90.1 65 70.8
Hund28689 Selenicereus undatus HOM05D005346 ORTHO05D007051 1.9e-16 90.1 78 61.5
Hund28691 Selenicereus undatus HOM05D005346 ORTHO05D007051 1.9e-16 90.1 78 61.5
Phvul.003G215000 Phaseolus vulgaris HOM05D005346 ORTHO05D007051 2.5e-16 89.7 65 70.8
TWI60G0731 Tripterygium wilfordii HOM05D005346 ORTHO05D007051 2.5e-16 89.7 65 70.8
AT1G62850 Arabidopsis thaliana HOM05D005346 ORTHO05D007051 3.2e-16 89.4 65 72.3
MSTRG.12059 Avicennia marina HOM05D005346 ORTHO05D007051 3.2e-16 89.4 86 58.1
Sp2g01760 Schrenkiella parvula HOM05D005346 ORTHO05D007051 4.2e-16 89.0 65 70.8
Glyma.17G135200 Glycine max HOM05D005346 ORTHO05D007051 7.2e-16 88.2 65 69.2
Hma1.2p1_0138F.1_g063170 Hydrangea macrophylla HOM05D005346 ORTHO05D007051 7.2e-16 88.2 82 58.5
VMungo1215G1290 Vigna mungo HOM05D005346 ORTHO05D007051 9.4e-16 87.8 65 69.2
SGA_v2.0_scaffold196G40944 Striga asiatica HOM05D005346 ORTHO05D007051 1.2e-15 87.4 87 57.5
Thecc.03G262000 Theobroma cacao HOM05D005346 ORTHO05D007051 1.4e-14 84.0 57 73.7
COL.COLO4_23877 Corchorus olitorius HOM05D005346 ORTHO05D007051 1.8e-14 83.6 83 59.0
PGSC0003DMG400003934 Solanum tuberosum HOM05D005346 ORTHO05D007051 2.3e-14 83.2 58 72.4
SalBow1G0489 Salvia bowleyana HOM05D005346 ORTHO05D007051 3.0e-14 82.8 86 53.5
TPR.G37664 Trifolium pratense HOM05D005346 ORTHO05D007051 1.2e-13 80.9 57 70.2
AagrBONN_evm.TU.Sc2ySwM_369.472 Anthoceros agrestis HOM05D005346 ORTHO05D007051 4.4e-13 79.0 71 53.5
Sed0008355 Sechium edule HOM05D005346 ORTHO05D007051 1.3e-12 77.4 94 51.1
SEGI_19635 Sequoiadendron giganteum HOM05D002621 ORTHO05D002929 1.8e-11 73.6 64 59.4
PRCOL_00004903 Prasinoderma coloniale HOM05D005346 ORTHO05D007051 7.0e-11 71.6 79 46.8
Cre02.g101800 Chlamydomonas reinhardtii HOM05D005346 ORTHO05D007051 1.6e-10 70.5 79 45.6
arahy.Tifrunner.gnm1.ann1.IL3HUZ Arachis hypogaea HOM05D005346 ORTHO05D007051 2.0e-10 70.1 74 54.1
VMungo1215G3342 Vigna mungo HOM05D005346 ORTHO05D007051 2.0e-10 70.1 56 66.1
Solyc08g007490.3 Solanum lycopersicum HOM05D005346 ORTHO05D020323 7.7e-10 68.2 89 44.9
Sopen08g003450 Solanum pennellii HOM05D005346 ORTHO05D020323 7.7e-10 68.2 89 44.9
Nitab4.5_0001816g0160 Nicotiana tabacum HOM05D005346 ORTHO05D020323 1.7e-09 67.0 86 46.5
SMO164G0226 Selaginella moellendorffii HOM05D005346 ORTHO05D007051 2.3e-09 66.6 49 63.3
Peaxi162Scf00102g01240 Petunia axillaris HOM05D005346 ORTHO05D020323 5.0e-09 65.5 89 43.8
MCO12G072 Micromonas commoda HOM05D005346 ORTHO05D007051 6.5e-09 65.1 69 43.5
Nitab4.5_0001265g0030 Nicotiana tabacum HOM05D005346 ORTHO05D020323 2.5e-08 63.2 89 43.8
Haze_26312 Corylus avellana HOM05D005346 ORTHO05D007051 4.7e-07 58.9 73 39.7


User provided reference genes

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