Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00696 Sequoiadendron giganteum HOM05D006134 ORTHO05D007671 6.3e-54 213.8 102 100.0
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 1.6e-25 119.4 66 83.3
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 4.4e-23 111.3 77 66.2
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 4.4e-23 111.3 66 72.7
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 7.5e-23 110.5 66 71.2
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 7.5e-23 110.5 66 71.2
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 2.2e-22 109.0 66 74.2
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 4.9e-22 107.8 66 71.2
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 4.9e-22 107.8 66 71.2
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 1.1e-21 106.7 66 71.2
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 1.8e-21 105.9 75 66.7
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 4.1e-21 104.8 66 71.2
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 4.1e-21 104.8 66 69.7
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 5.4e-21 104.4 75 66.7
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 7.0e-21 104.0 67 71.6
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 7.0e-21 104.0 75 65.3
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 9.2e-21 103.6 75 65.3
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 9.2e-21 103.6 66 71.2
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 9.2e-21 103.6 75 65.3
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 9.2e-21 103.6 67 70.1
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 1.2e-20 103.2 75 64.0
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 1.6e-20 102.8 66 71.2
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 1.6e-20 102.8 75 66.7
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 3.5e-20 101.7 66 68.2
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 3.5e-20 101.7 66 68.2
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 3.5e-20 101.7 66 68.2
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 3.5e-20 101.7 77 62.3
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 3.5e-20 101.7 77 63.6
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 4.5e-20 101.3 77 62.3
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 4.5e-20 101.3 77 61.0
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 4.5e-20 101.3 66 69.7
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 5.9e-20 100.9 75 62.7
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 5.9e-20 100.9 66 68.2
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 5.9e-20 100.9 66 69.7
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 5.9e-20 100.9 77 62.3
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 7.8e-20 100.5 77 61.0
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 7.8e-20 100.5 77 61.0
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 7.8e-20 100.5 66 65.2
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 7.8e-20 100.5 66 68.2
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 7.8e-20 100.5 66 66.7
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 7.8e-20 100.5 65 70.8
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 7.8e-20 100.5 65 70.8
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 7.8e-20 100.5 66 68.2
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 1.0e-19 100.1 66 68.2
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 1.0e-19 100.1 66 71.2
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 1.0e-19 100.1 66 71.2
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 1.0e-19 100.1 66 68.2
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 1.3e-19 99.8 66 68.2
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 1.3e-19 99.8 66 69.7
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 1.7e-19 99.4 66 69.7
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 1.7e-19 99.4 66 69.7
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.7e-19 99.4 66 66.7
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.7e-19 99.4 66 66.7
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 1.7e-19 99.4 66 66.7
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 1.7e-19 99.4 66 68.2
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 2.3e-19 99.0 66 66.7
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 2.3e-19 99.0 66 66.7
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 2.3e-19 99.0 66 65.2
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 2.3e-19 99.0 75 61.3
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 2.3e-19 99.0 75 61.3
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 2.3e-19 99.0 66 68.2
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 2.3e-19 99.0 66 68.2
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 2.3e-19 99.0 66 66.7
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 2.3e-19 99.0 66 68.2
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 2.3e-19 99.0 66 65.2
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.9e-19 98.6 66 66.7
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 2.9e-19 98.6 77 62.3
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 2.9e-19 98.6 77 62.3
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 2.9e-19 98.6 77 62.3
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 2.9e-19 98.6 66 69.7
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 3.8e-19 98.2 66 68.2
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 3.8e-19 98.2 66 68.2
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 3.8e-19 98.2 66 68.2
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 3.8e-19 98.2 66 66.7
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 5.0e-19 97.8 66 68.2
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 5.0e-19 97.8 66 66.7
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 5.0e-19 97.8 65 67.7
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 5.0e-19 97.8 66 65.2
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 1.1e-18 96.7 65 66.2
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 1.1e-18 96.7 66 66.7
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 1.5e-18 96.3 77 57.1
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 1.5e-18 96.3 77 55.8
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 1.9e-18 95.9 66 68.2
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 1.9e-18 95.9 66 68.2
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 1.9e-18 95.9 66 66.7
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 1.9e-18 95.9 66 66.7
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 2.5e-18 95.5 66 66.7
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 2.5e-18 95.5 66 66.7
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 3.3e-18 95.1 66 63.6
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 3.3e-18 95.1 75 60.0
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 4.3e-18 94.7 77 57.1
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 5.6e-18 94.4 77 58.4
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 5.6e-18 94.4 66 66.7
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 5.6e-18 94.4 66 63.6
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 7.3e-18 94.0 66 62.1
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 7.3e-18 94.0 77 57.1
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 7.3e-18 94.0 66 65.2
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 9.5e-18 93.6 66 63.6
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.6e-17 92.8 66 65.2
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 1.6e-17 92.8 77 57.1
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 2.1e-17 92.4 74 60.8
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 3.6e-17 91.7 77 57.1
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 4.7e-17 91.3 66 63.6
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 6.1e-17 90.9 80 52.5
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 6.1e-17 90.9 78 55.1
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 4.0e-16 88.2 73 56.2
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 5.2e-16 87.8 68 58.8
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 5.2e-16 87.8 68 58.8
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 5.2e-16 87.8 68 58.8
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 9.8e-15 83.6 91 49.5
Nitab4.5_0000165g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 1.8e-13 79.3 69 58.0
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 5.4e-13 77.8 58 60.3
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 2.7e-12 75.5 52 55.8
Sabra16G0121700 Salix brachista HOM05D006134 ORTHO05D007671 5.6e-10 67.8 44 75.0
TPR.G34385 Trifolium pratense HOM05D006134 ORTHO05D007671 9.5e-10 67.0 44 72.7
SMO230G0118 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 1.8e-08 62.8 40 70.0
EL10Ac8g18393 Beta vulgaris HOM05D006134 ORTHO05D007671 2.3e-08 62.4 45 68.9
Prupe.4G038000 Prunus persica HOM05D006134 ORTHO05D007671 4.0e-08 61.6 59 54.2


User provided reference genes

Program Settings