Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00634 Sequoiadendron giganteum HOM05D007643 ORTHO05D007801 6.8e-57 223.8 115 100.0
PSO063G2669 Papaver somniferum HOM05D007643 ORTHO05D007801 4.1e-17 91.7 91 51.6
ATR0691G209 Amborella trichopoda HOM05D007643 ORTHO05D007801 9.0e-17 90.5 95 49.5
PSO782G0046 Papaver somniferum HOM05D007643 ORTHO05D007801 1.2e-16 90.1 91 49.5
CDE02G0802 Ceratophyllum demersum HOM05D007643 ORTHO05D007801 1.7e-15 86.3 69 55.1
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 4.6e-13 78.2 94 42.6
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 6.1e-13 77.8 92 46.7
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 3.0e-12 75.5 87 50.6
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 3.0e-12 75.5 94 47.9
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 5.1e-12 74.7 98 44.9
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 8.8e-12 73.9 94 47.9
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 1.1e-11 73.6 101 42.6
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.1e-11 73.6 94 44.7
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 1.1e-11 73.6 98 43.9
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 1.5e-11 73.2 100 40.0
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 1.5e-11 73.2 94 44.7
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 3.3e-11 72.0 109 41.3
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 4.3e-11 71.6 92 45.7
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 5.7e-11 71.2 109 42.2
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 5.7e-11 71.2 79 46.8
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 9.7e-11 70.5 79 48.1
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 1.3e-10 70.1 93 43.0
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.7e-10 69.7 61 54.1
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 2.2e-10 69.3 95 45.3
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 2.8e-10 68.9 92 43.5
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 2.8e-10 68.9 99 43.4
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 2.8e-10 68.9 95 43.2
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 3.7e-10 68.6 89 41.6
Nn3g17593 Nelumbo nucifera HOM05D007643 ORTHO05D007801 3.7e-10 68.6 53 60.4
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 4.8e-10 68.2 104 40.4
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 4.8e-10 68.2 79 46.8
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 6.3e-10 67.8 104 40.4
Mapoly0143s0033 Marchantia polymorpha HOM05D022757 ORTHO05D024951 6.3e-10 67.8 87 46.0
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 6.3e-10 67.8 106 43.4
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 1.1e-09 67.0 61 52.5
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 1.1e-09 67.0 97 42.3
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 1.1e-09 67.0 100 42.0
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.4e-09 66.6 99 38.4
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 1.8e-09 66.2 100 41.0
CSS0044770 Camellia sinensis var. sinensis HOM05D007643 ORTHO05D007801 4.1e-09 65.1 87 46.0
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 5.3e-09 64.7 87 41.4
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 6.9e-09 64.3 95 43.2
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 9.1e-09 63.9 98 38.8
Oeu059396.1 Olea europaea HOM05D007643 ORTHO05D007801 9.1e-09 63.9 89 41.6
HPP92_019460 Vanilla planifolia HOM05D007643 ORTHO05D007801 9.1e-09 63.9 60 56.7
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 1.2e-08 63.5 97 36.1
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 1.2e-08 63.5 79 48.1
Glyma.06G180500 Glycine max HOM05D007643 ORTHO05D007801 1.5e-08 63.2 97 39.2
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 3.4e-08 62.0 99 36.4
Glyma.04G185600 Glycine max HOM05D007643 ORTHO05D007801 3.4e-08 62.0 86 37.2
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 3.4e-08 62.0 96 40.6
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 4.5e-08 61.6 95 40.0
AUR62032152 Chenopodium quinoa HOM05D007643 ORTHO05D007801 5.9e-08 61.2 91 42.9
TPR.G15310 Trifolium pratense HOM05D007643 ORTHO05D007801 5.9e-08 61.2 86 37.2
Psat1g029200 Pisum sativum HOM05D007643 ORTHO05D007801 1.0e-07 60.5 93 35.5
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 1.0e-07 60.5 99 40.4
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 1.0e-07 60.5 94 36.2
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.3e-07 60.1 92 38.0
Cc04_g08010 Coffea canephora HOM05D007643 ORTHO05D007801 1.7e-07 59.7 108 36.1
Pp3c9_8750 Physcomitrium patens HOM05D022757 ORTHO05D024951 1.7e-07 59.7 96 38.5
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 1.7e-07 59.7 86 38.4
AUR62039686 Chenopodium quinoa HOM05D007643 ORTHO05D007801 2.9e-07 58.9 91 40.7
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 3.8e-07 58.5 92 38.0
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 5.0e-07 58.2 94 37.2
Mapoly0124s0005 Marchantia polymorpha HOM05D022757 ORTHO05D024951 5.0e-07 58.2 98 42.9
Zm00001eb101340 Zea mays HOM05D007643 ORTHO05D007801 5.0e-07 58.2 78 41.0
Lsat_1_v5_gn_4_112541 Lactuca sativa HOM05D007643 ORTHO05D007801 1.1e-06 57.0 86 37.2
Sp2g24160 Schrenkiella parvula HOM05D010173 ORTHO05D007801 2.5e-06 55.8 78 37.2
Thhalv10004975m.g Eutrema salsugineum HOM05D010173 ORTHO05D007801 7.2e-06 54.3 76 36.8


User provided reference genes

Program Settings