Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 0.0e+00 1395.9 792 100.0
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 4.5e-75 287.0 826 33.4
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 2.3e-74 284.6 814 35.9
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 1.6e-72 278.5 785 35.0
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 1.2e-70 272.3 814 34.2
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 2.3e-66 258.1 629 38.5
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 2.8e-64 251.1 569 38.5
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 2.6e-62 244.6 631 37.9
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 3.7e-61 240.7 634 34.7
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 1.4e-60 238.8 591 35.9
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 2.7e-59 234.6 632 37.0
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 1.0e-58 232.6 675 35.1
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 1.5e-57 228.8 806 32.3
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 2.8e-56 224.6 794 32.4
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 3.6e-56 224.2 665 34.6
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 4.7e-56 223.8 771 33.1
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 8.0e-56 223.0 794 31.4
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 8.0e-56 223.0 820 32.6
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 1.1e-55 222.6 819 32.7
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 1.8e-55 221.9 810 32.2
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 2.6e-54 218.0 777 31.8
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 2.6e-54 218.0 599 36.4
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 2.6e-54 218.0 767 33.5
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 3.4e-54 217.6 646 32.2
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 7.5e-54 216.5 776 30.8
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 7.0e-52 209.9 652 34.0
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 1.2e-51 209.1 658 33.6
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 2.1e-51 208.4 628 34.1
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 2.1e-51 208.4 601 34.4
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 3.5e-51 207.6 802 30.9
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 7.8e-51 206.5 576 35.2
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 1.3e-50 205.7 740 33.4
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 2.3e-50 204.9 577 36.9
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 2.5e-49 201.4 799 30.7
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 3.3e-49 201.1 795 30.4
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 7.3e-49 199.9 557 36.4
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 1.2e-48 199.1 794 31.5
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 1.6e-48 198.7 826 31.8
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 3.6e-48 197.6 792 30.9
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 3.6e-48 197.6 687 32.8
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 3.6e-48 197.6 776 33.0
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 8.1e-48 196.4 684 33.2
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 3.1e-47 194.5 620 33.1
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 6.8e-47 193.4 800 32.1
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 8.9e-47 193.0 862 30.2
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 2.6e-46 191.4 592 33.3
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 3.4e-46 191.0 766 30.5
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 3.4e-46 191.0 786 30.2
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 4.4e-46 190.7 617 32.7
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 5.8e-46 190.3 617 33.5
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 5.8e-46 190.3 642 32.7
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 9.9e-46 189.5 859 29.5
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 1.3e-45 189.1 780 31.4
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 2.2e-45 188.3 636 31.1
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 2.9e-45 188.0 800 31.1
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 3.7e-45 187.6 618 34.1
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 1.1e-44 186.0 845 29.6
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 1.4e-44 185.7 678 31.0
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 1.9e-44 185.3 777 31.3
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 3.2e-44 184.5 786 30.5
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 7.1e-44 183.3 777 31.0
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 1.6e-43 182.2 773 29.6
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 2.7e-43 181.4 777 29.7
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 3.5e-43 181.0 774 29.5
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 1.3e-42 179.1 815 29.2
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 3.9e-42 177.6 800 31.0
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 4.3e-41 174.1 638 32.8
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 1.2e-40 172.6 819 29.9
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 4.7e-40 170.6 590 34.7
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 8.1e-40 169.9 653 33.1
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.4e-39 169.1 604 33.8
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 6.8e-39 166.8 836 28.3
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 1.3e-37 162.5 625 30.4
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 4.9e-37 160.6 800 27.8
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 5.4e-36 157.1 812 29.6
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 1.2e-35 156.0 603 31.0
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 7.8e-35 153.3 712 29.8
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 1.3e-34 152.5 625 30.4
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 1.3e-34 152.5 625 30.4
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 1.1e-33 149.4 582 32.3
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 1.1e-33 149.4 582 32.3
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 2.8e-32 144.8 438 32.9
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 3.6e-32 144.4 619 29.7
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 6.2e-32 143.7 304 39.8
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 6.2e-32 143.7 628 31.4
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 1.2e-30 139.4 809 28.2
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 6.6e-26 123.6 714 26.8
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 1.9e-25 122.1 750 26.7
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 4.0e-23 114.4 525 29.0
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 7.6e-22 110.2 746 27.2
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 8.4e-21 106.7 476 29.2
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 8.4e-21 106.7 386 33.7
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 7.1e-20 103.6 634 27.0
HPP92_018471 Vanilla planifolia HOM05D002134 ORTHO05D008658 3.5e-19 101.3 176 43.8
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 1.0e-18 99.8 627 27.3
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 2.3e-18 98.6 647 27.7
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 2.3e-18 98.6 510 27.3
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 8.7e-18 96.7 605 27.3
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 2.1e-16 92.0 733 26.5
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 2.4e-15 88.6 653 26.8
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 2.4e-15 88.6 653 26.8
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 1.5e-14 85.9 646 28.6
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 2.0e-14 85.5 417 30.2
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 4.5e-14 84.3 442 27.6
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 2.2e-13 82.0 679 26.8
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 3.8e-13 81.3 583 26.2
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 8.4e-13 80.1 541 29.0
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 3.2e-12 78.2 229 32.8
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 9.3e-12 76.6 832 25.8
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 9.3e-12 76.6 173 37.6
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 3.5e-11 74.7 824 26.6
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 6.2e-08 63.9 832 26.1
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 1.1e-07 63.2 652 25.5
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 5.3e-07 60.8 151 41.1
Peaxi162Scf00162g00213 Petunia axillaris HOM05D000561 ORTHO05D000514 9.0e-07 60.1 66 50.0


User provided reference genes

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