Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00588 Sequoiadendron giganteum HOM05D005454 ORTHO05D006781 6.9e-90 334.0 170 100.0
Actinidia00854 Actinidia chinensis HOM05D005454 ORTHO05D006781 3.5e-41 172.2 127 66.1
vmacro09764 Vaccinium macrocarpon HOM05D005454 ORTHO05D006781 6.0e-41 171.4 128 66.4
Ah.02g115510 Amaranthus hybridus HOM05D005454 ORTHO05D006781 7.8e-41 171.0 119 68.1
Thecc.02G245200 Theobroma cacao HOM05D005454 ORTHO05D006781 7.8e-41 171.0 128 64.8
TAR626G0894 Trochodendron aralioides HOM05D005454 ORTHO05D006781 7.8e-41 171.0 127 64.6
ATR0820G041 Amborella trichopoda HOM05D005454 ORTHO05D006781 1.7e-40 169.9 120 66.7
MD10G1217600 Malus domestica HOM05D005454 ORTHO05D006781 1.7e-40 169.9 151 56.3
PGR102G3369 Punica granatum HOM05D005454 ORTHO05D006781 1.7e-40 169.9 125 65.6
Atru.chr1.44 Acer truncatum HOM05D005454 ORTHO05D006781 2.3e-40 169.5 127 64.6
ClCG02G018790 Citrullus lanatus HOM05D005454 ORTHO05D006781 3.0e-40 169.1 132 62.1
Carub.0002s2625 Capsella rubella HOM05D005454 ORTHO05D006781 3.9e-40 168.7 116 69.0
Duzib248G0167 Durio zibethinus HOM05D005454 ORTHO05D006781 5.0e-40 168.3 128 64.1
BcaB02g07212 Brassica carinata HOM05D005454 ORTHO05D006781 6.6e-40 167.9 116 67.2
BolC6t38153H Brassica oleracea HOM05D005454 ORTHO05D006781 8.6e-40 167.5 116 66.4
GSVIVG01036708001 Vitis vinifera HOM05D005454 ORTHO05D006781 8.6e-40 167.5 126 67.5
AT1G79390 Arabidopsis thaliana HOM05D005454 ORTHO05D006781 1.1e-39 167.2 116 68.1
BcaC08g45360 Brassica carinata HOM05D005454 ORTHO05D006781 1.1e-39 167.2 116 66.4
A07p27170 Brassica napus HOM05D005454 ORTHO05D006781 1.1e-39 167.2 116 66.4
C06p29920 Brassica napus HOM05D005454 ORTHO05D006781 1.1e-39 167.2 116 66.4
BraA07t30361Z Brassica rapa HOM05D005454 ORTHO05D006781 1.1e-39 167.2 116 66.4
Lsat_1_v5_gn_5_184081 Lactuca sativa HOM05D005454 ORTHO05D006781 1.1e-39 167.2 113 69.0
BraA07t31955Z Brassica rapa HOM05D005454 ORTHO05D006781 1.5e-39 166.8 116 67.2
CANSAT56G0738 Cannabis sativa HOM05D005454 ORTHO05D006781 1.5e-39 166.8 128 62.5
CANSAT56G1199 Cannabis sativa HOM05D005454 ORTHO05D006781 1.5e-39 166.8 134 61.2
Duzib251G0225 Durio zibethinus HOM05D005454 ORTHO05D006781 1.5e-39 166.8 128 64.1
Manes.16G045300 Manihot esculenta HOM05D005454 ORTHO05D006781 1.5e-39 166.8 127 62.2
CsaV3_6G013400 Cucumis sativus L. HOM05D005454 ORTHO05D006781 1.9e-39 166.4 132 59.8
Sabra08G0060600 Salix brachista HOM05D005454 ORTHO05D006781 2.5e-39 166.0 116 67.2
Hund10936 Selenicereus undatus HOM05D005454 ORTHO05D006781 2.5e-39 166.0 119 64.7
Nn7g38402 Nelumbo nucifera HOM05D005454 ORTHO05D006781 3.3e-39 165.6 127 63.8
Prupe.4G126700 Prunus persica HOM05D005454 ORTHO05D006781 3.3e-39 165.6 127 63.0
Thhalv10019255m.g Eutrema salsugineum HOM05D005454 ORTHO05D006781 4.3e-39 165.2 116 66.4
Gohir.A02G014000 Gossypium hirsutum HOM05D005454 ORTHO05D006781 5.6e-39 164.9 120 65.8
Aa31LG4G1640 Aethionema arabicum HOM05D005454 ORTHO05D006781 7.3e-39 164.5 116 66.4
BcaC08g47498 Brassica carinata HOM05D005454 ORTHO05D006781 7.3e-39 164.5 116 66.4
C06p53270 Brassica napus HOM05D005454 ORTHO05D006781 7.3e-39 164.5 116 66.4
BolC6t40345H Brassica oleracea HOM05D005454 ORTHO05D006781 7.3e-39 164.5 116 66.4
Eucgr.F04477 Eucalyptus grandis HOM05D005454 ORTHO05D006781 9.5e-39 164.1 123 64.2
Gohir.D01G133900 Gossypium hirsutum HOM05D005454 ORTHO05D006781 9.5e-39 164.1 127 63.0
Gorai.002G165600 Gossypium raimondii HOM05D005454 ORTHO05D006781 9.5e-39 164.1 120 65.8
AL2G40000 Arabidopsis lyrata HOM05D005454 ORTHO05D006781 1.2e-38 163.7 113 69.0
COL.COLO4_19518 Corchorus olitorius HOM05D005454 ORTHO05D006781 1.2e-38 163.7 127 62.2
QL04p094645 Quercus lobata HOM05D005454 ORTHO05D006781 1.2e-38 163.7 117 66.7
QL04p094846 Quercus lobata HOM05D005454 ORTHO05D006781 1.2e-38 163.7 117 66.7
EL10Ac5g12502 Beta vulgaris HOM05D005454 ORTHO05D006781 1.6e-38 163.3 119 64.7
Cpa.g.sc32.137 Carica papaya HOM05D005454 ORTHO05D006781 1.6e-38 163.3 123 65.9
TWI59G0830 Tripterygium wilfordii HOM05D005454 ORTHO05D006781 1.6e-38 163.3 128 63.3
Zm00001eb241290 Zea mays HOM05D005454 ORTHO05D006781 1.6e-38 163.3 123 63.4
SGA_v2.0_scaffold186G40175 Striga asiatica HOM05D005454 ORTHO05D006781 2.8e-38 162.5 115 67.0
Ciclev10006210m.g Citrus clementina HOM05D005454 ORTHO05D006781 3.6e-38 162.2 124 62.9
Rhsim04G0003500 Rhododendron simsii HOM05D005454 ORTHO05D006781 3.6e-38 162.2 141 59.6
Cc00_g09040 Coffea canephora HOM05D005454 ORTHO05D006781 4.7e-38 161.8 117 65.8
Nitab4.5_0006630g0030 Nicotiana tabacum HOM05D005454 ORTHO05D006781 4.7e-38 161.8 129 63.6
Psat4g141200 Pisum sativum HOM05D005454 ORTHO05D006781 4.7e-38 161.8 107 72.0
CiPaw.15G112200 Carya illinoinensis HOM05D005454 ORTHO05D006781 6.2e-38 161.4 129 59.7
Os02g0495900 Oryza sativa ssp. japonica HOM05D005454 ORTHO05D006781 6.2e-38 161.4 122 64.8
Sed0024280 Sechium edule HOM05D005454 ORTHO05D006781 6.2e-38 161.4 134 58.2
AUR62030518 Chenopodium quinoa HOM05D005454 ORTHO05D006781 8.1e-38 161.0 113 68.1
AUR62030774 Chenopodium quinoa HOM05D005454 ORTHO05D006781 8.1e-38 161.0 113 68.1
PSO675G7587 Papaver somniferum HOM05D005454 ORTHO05D006781 8.1e-38 161.0 119 66.4
Sc18g0003140 Simmondsia chinensis HOM05D005454 ORTHO05D006781 8.1e-38 161.0 124 62.1
Migut.M01498 Erythranthe guttata HOM05D005454 ORTHO05D006781 1.1e-37 160.6 127 61.4
Potri.008G081400 Populus trichocarpa HOM05D005454 ORTHO05D006781 1.1e-37 160.6 130 60.0
SalBow8G4406 Salvia bowleyana HOM05D005454 ORTHO05D006781 1.1e-37 160.6 129 63.6
RcHm_v2.0_Chr5g0023201 Rosa chinensis HOM05D005454 ORTHO05D006781 1.4e-37 160.2 121 64.5
SalBow8G5040 Salvia bowleyana HOM05D005454 ORTHO05D006781 1.4e-37 160.2 125 64.0
Ca_26272_v3 Cicer arietinum L. HOM05D005454 ORTHO05D006781 1.8e-37 159.8 115 67.0
FvH4_3g13970 Fragaria vesca HOM05D005454 ORTHO05D006781 1.8e-37 159.8 121 64.5
FAN11G3450 Fragaria x ananassa HOM05D005454 ORTHO05D006781 1.8e-37 159.8 121 64.5
FAN16G0850 Fragaria x ananassa HOM05D005454 ORTHO05D006781 1.8e-37 159.8 121 64.5
FAN21G1174 Fragaria x ananassa HOM05D005454 ORTHO05D006781 1.8e-37 159.8 121 64.5
THA.LOC104812391 Tarenaya hassleriana HOM05D005454 ORTHO05D006781 2.3e-37 159.5 129 62.0
Medtr8g447300 Medicago truncatula HOM05D005454 ORTHO05D006781 3.1e-37 159.1 107 70.1
Nitab4.5_0004200g0060 Nicotiana tabacum HOM05D005454 ORTHO05D006781 3.1e-37 159.1 129 62.8
Solyc09g098140.4 Solanum lycopersicum HOM05D005454 ORTHO05D006781 3.1e-37 159.1 129 63.6
Sopen09g036090 Solanum pennellii HOM05D005454 ORTHO05D006781 3.1e-37 159.1 129 63.6
TWI38G1327 Tripterygium wilfordii HOM05D005454 ORTHO05D006781 3.1e-37 159.1 128 63.3
Aqoxy1G01376 Aquilegia oxysepala HOM05D005454 ORTHO05D006781 4.0e-37 158.7 124 62.9
Dinv42456 Davidia involucrata HOM05D005454 ORTHO05D006781 5.2e-37 158.3 117 65.8
Peaxi162Scf00286g00452 Petunia axillaris HOM05D005454 ORTHO05D006781 5.2e-37 158.3 129 62.0
Glyma.11G026500 Glycine max HOM05D005454 ORTHO05D006781 6.8e-37 157.9 117 65.0
THA.LOC104808143 Tarenaya hassleriana HOM05D005454 ORTHO05D006781 8.9e-37 157.5 116 63.8
HanXRQChr13g0408901 Helianthus annuus HOM05D005454 ORTHO05D006781 1.2e-36 157.1 114 62.3
HanXRQChr13g0408931 Helianthus annuus HOM05D005454 ORTHO05D006781 1.2e-36 157.1 114 62.3
VMungo1215G2509 Vigna mungo HOM05D005454 ORTHO05D006781 1.2e-36 157.1 117 65.8
Glyma.01G216400 Glycine max HOM05D005454 ORTHO05D006781 1.5e-36 156.8 117 65.8
Oeu029453.1 Olea europaea HOM05D005454 ORTHO05D006781 2.0e-36 156.4 127 58.3
PGSC0003DMG400011901 Solanum tuberosum HOM05D005454 ORTHO05D006781 2.0e-36 156.4 129 62.0
TPR.G8202 Trifolium pratense HOM05D005454 ORTHO05D006781 2.0e-36 156.4 107 67.3
Phvul.002G154100 Phaseolus vulgaris HOM05D005454 ORTHO05D006781 2.6e-36 156.0 117 64.1
Lalb_Chr03g0031911 Lupinus albus HOM05D005454 ORTHO05D006781 3.4e-36 155.6 117 65.8
MD05G1239400 Malus domestica HOM05D005454 ORTHO05D006781 9.8e-36 154.1 117 64.1
arahy.Tifrunner.gnm1.ann1.DLUG3E Arachis hypogaea HOM05D005454 ORTHO05D006781 1.3e-35 153.7 121 64.5
Lj3g0001328 Lotus japonicus HOM05D005454 ORTHO05D006781 1.3e-35 153.7 117 63.2
CAN.G710.29 Capsicum annuum HOM05D005454 ORTHO05D006781 1.7e-35 153.3 127 57.5
unitig_32.g11075 Utricularia gibba HOM05D005454 ORTHO05D006781 1.7e-35 153.3 114 61.4
arahy.Tifrunner.gnm1.ann1.TLTS2V Arachis hypogaea HOM05D005454 ORTHO05D006781 2.9e-35 152.5 126 61.9
FAN25G3791 Fragaria x ananassa HOM05D005454 ORTHO05D006781 2.9e-35 152.5 121 62.0
ECA240G0828 Erigeron canadensis HOM05D005454 ORTHO05D006781 1.4e-34 150.2 119 62.2
CiPaw.15G112600 Carya illinoinensis HOM05D005454 ORTHO05D006781 4.1e-34 148.7 153 50.3
MBI13_g09219_MAGBIO Magnolia biondii HOM05D005454 ORTHO05D006781 5.4e-34 148.3 126 60.3
Sabra10G0134500 Salix brachista HOM05D005454 ORTHO05D006781 1.2e-33 147.1 130 57.7
MELO3C019617.2 Cucumis melo HOM05D005454 ORTHO05D006781 1.6e-33 146.7 150 50.0
MSTRG.16083 Avicennia marina HOM05D005454 ORTHO05D006781 4.6e-33 145.2 121 60.3
CiPaw.15G112400 Carya illinoinensis HOM05D005454 ORTHO05D006781 8.6e-32 141.0 143 50.3
Mapoly0011s0156 Marchantia polymorpha HOM05D005454 ORTHO05D006781 1.0e-24 117.5 112 52.7
Pp3c27_5100 Physcomitrium patens HOM05D005454 ORTHO05D006781 5.1e-24 115.2 129 47.3
AagrBONN_evm.TU.Sc2ySwM_117.1988 Anthoceros agrestis HOM05D005454 ORTHO05D006781 1.9e-23 113.2 112 48.2
CDE02G1314 Ceratophyllum demersum HOM05D000236 ORTHO05D000192 5.6e-23 111.7 91 63.7
CBR_g2846 Chara braunii HOM05D005454 ORTHO05D006781 5.2e-21 105.1 114 47.4
Sp5g34440 Schrenkiella parvula HOM05D005454 ORTHO05D006781 1.4e-18 97.1 73 65.8
HPP92_015989 Vanilla planifolia HOM05D005454 ORTHO05D006781 1.6e-17 93.6 73 57.5
A07p44460 Brassica napus HOM05D005454 ORTHO05D006781 1.0e-16 90.9 66 59.1
Cfa017757 Carpinus fangiana HOM05D005454 ORTHO05D006781 5.1e-16 88.6 61 70.5
Actinidia03633 Actinidia chinensis HOM05D005454 ORTHO05D012925 8.7e-16 87.8 67 68.7
Gohir.A03G171875 Gossypium hirsutum HOM05D005454 ORTHO05D006781 8.7e-16 87.8 73 54.8
CSS0036802 Camellia sinensis var. sinensis HOM05D005454 ORTHO05D006781 2.1e-14 83.2 66 56.1
QL04p094659 Quercus lobata HOM05D005454 ORTHO05D006781 2.1e-14 83.2 50 80.0
CARHR073050 Cardamine hirsuta HOM05D005454 ORTHO05D006781 4.8e-14 82.0 50 78.0
Potri.010G174700 Populus trichocarpa HOM05D005454 ORTHO05D006781 6.2e-14 81.6 58 67.2
Nn7g38396 Nelumbo nucifera HOM05D005454 ORTHO05D006781 1.1e-13 80.9 73 49.3
Haze_01788 Corylus avellana HOM05D005454 ORTHO05D006781 1.8e-13 80.1 72 47.2
Cfa017755 Carpinus fangiana HOM05D005454 ORTHO05D006781 2.4e-13 79.7 66 51.5
Haze_18487 Corylus avellana HOM05D005454 ORTHO05D006781 2.4e-13 79.7 66 51.5
Haze_08480 Corylus avellana HOM05D005454 ORTHO05D006781 3.1e-13 79.3 66 51.5
Hma1.2p1_0151F.1_g066990 Hydrangea macrophylla HOM05D005454 ORTHO05D006781 3.1e-13 79.3 66 53.0
BolC8t48807H Brassica oleracea HOM05D005454 ORTHO05D006781 6.9e-13 78.2 49 73.5
CARHR073040 Cardamine hirsuta HOM05D005454 ORTHO05D006781 1.5e-12 77.0 58 55.2
Atru.chr1.31 Acer truncatum HOM05D005454 ORTHO05D006781 2.0e-12 76.6 81 53.1
Cc00_g28770 Coffea canephora HOM05D001769 ORTHO05D001695 2.6e-12 76.3 50 72.0
DCAR_013713 Daucus carota HOM05D005454 ORTHO05D006781 7.6e-12 74.7 108 40.7
CDE04G2596 Ceratophyllum demersum HOM05D005454 ORTHO05D006781 9.9e-12 74.3 71 54.9
SMO367G0923 Selaginella moellendorffii HOM05D005454 ORTHO05D006781 3.8e-11 72.4 118 37.3
BcaC08g42854 Brassica carinata HOM05D005454 ORTHO05D006781 5.4e-10 68.6 43 74.4
C06p00690 Brassica napus HOM05D005454 ORTHO05D006781 5.4e-10 68.6 43 74.4
BolC6t35206H Brassica oleracea HOM05D005454 ORTHO05D006781 5.4e-10 68.6 43 74.4
C03p71170 Brassica napus HOM05D005454 ORTHO05D006781 7.1e-10 68.2 43 74.4
Gohir.A04G138000 Gossypium hirsutum HOM05D005454 ORTHO05D006781 8.7e-08 61.2 57 54.4
RcHm_v2.0_Chr5g0023191 Rosa chinensis HOM05D005454 ORTHO05D006781 1.1e-07 60.8 57 47.4


User provided reference genes

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