Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00521 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 1.5e-110 402.9 205 100.0
PSO339G3895 Papaver somniferum HOM05D004500 ORTHO05D005775 6.7e-39 164.9 258 41.9
MBI19_g07497_MAGBIO Magnolia biondii HOM05D004500 ORTHO05D005775 2.0e-38 163.3 155 54.2
TAR623G1318 Trochodendron aralioides HOM05D004500 ORTHO05D005775 2.0e-38 163.3 258 40.3
ATR0307G114 Amborella trichopoda HOM05D004500 ORTHO05D005775 5.7e-38 161.8 153 54.2
Aqoxy1G00409 Aquilegia oxysepala HOM05D004500 ORTHO05D005775 1.3e-37 160.6 258 41.5
Pp3c1_28010 Physcomitrium patens HOM05D004500 ORTHO05D005775 8.2e-37 157.9 255 40.4
Actinidia06989 Actinidia chinensis HOM05D004500 ORTHO05D005775 4.1e-36 155.6 256 38.3
Dinv22199 Davidia involucrata HOM05D004500 ORTHO05D005775 4.1e-36 155.6 258 38.8
Nn7g36895 Nelumbo nucifera HOM05D004500 ORTHO05D005775 5.3e-36 155.2 258 38.8
COL.COLO4_06617 Corchorus olitorius HOM05D004500 ORTHO05D005775 9.1e-36 154.5 256 35.9
Lalb_Chr10g0106121 Lupinus albus HOM05D004500 ORTHO05D005775 2.0e-35 153.3 258 39.1
Glyma.14G036800 Glycine max HOM05D004500 ORTHO05D005775 2.6e-35 152.9 258 37.6
Ciclev10014018m.g Citrus clementina HOM05D004500 ORTHO05D005775 3.5e-35 152.5 153 47.7
Potri.001G274500 Populus trichocarpa HOM05D004500 ORTHO05D005775 5.9e-35 151.8 258 37.2
Aa31LG5G9010 Aethionema arabicum HOM05D004500 ORTHO05D005775 7.7e-35 151.4 256 38.7
MSTRG.21337 Avicennia marina HOM05D004500 ORTHO05D005775 7.7e-35 151.4 258 36.4
CANSAT54G2073 Cannabis sativa HOM05D004500 ORTHO05D005775 1.3e-34 150.6 153 48.4
CDE02G2423 Ceratophyllum demersum HOM05D004500 ORTHO05D005775 2.2e-34 149.8 258 37.6
Migut.D00681 Erythranthe guttata HOM05D004500 ORTHO05D005775 2.2e-34 149.8 259 36.7
Thhalv10011180m.g Eutrema salsugineum HOM05D004500 ORTHO05D005775 2.2e-34 149.8 258 36.4
TPR.G16395 Trifolium pratense HOM05D004500 ORTHO05D005775 2.2e-34 149.8 258 38.4
Gohir.A09G108500 Gossypium hirsutum HOM05D004500 ORTHO05D005775 2.9e-34 149.4 256 37.1
LjContig00564g0025272 Lotus japonicus HOM05D004500 ORTHO05D005775 2.9e-34 149.4 258 36.0
Atru.chr3.2854 Acer truncatum HOM05D004500 ORTHO05D005775 3.8e-34 149.1 256 37.9
Atru.chr3.2856 Acer truncatum HOM05D004500 ORTHO05D005775 3.8e-34 149.1 256 37.9
Phvul.008G203200 Phaseolus vulgaris HOM05D004500 ORTHO05D005775 3.8e-34 149.1 258 37.2
Sabra16G0169000 Salix brachista HOM05D004500 ORTHO05D005775 3.8e-34 149.1 258 36.8
GSVIVG01037358001 Vitis vinifera HOM05D004500 ORTHO05D005775 5.0e-34 148.7 258 39.1
arahy.Tifrunner.gnm1.ann1.G3VBDM Arachis hypogaea HOM05D004500 ORTHO05D005775 6.5e-34 148.3 256 37.5
AL4G19970 Arabidopsis lyrata HOM05D004500 ORTHO05D005775 1.1e-33 147.5 258 37.6
Cfa009915 Carpinus fangiana HOM05D004500 ORTHO05D005775 1.5e-33 147.1 258 36.8
arahy.Tifrunner.gnm1.ann1.VEQ9JC Arachis hypogaea HOM05D004500 ORTHO05D005775 2.5e-33 146.4 256 37.1
Ca_06188_v3 Cicer arietinum L. HOM05D004500 ORTHO05D005775 2.5e-33 146.4 258 36.8
AT2G26780 Arabidopsis thaliana HOM05D004500 ORTHO05D005775 3.2e-33 146.0 258 36.0
CARHR118960 Cardamine hirsuta HOM05D004500 ORTHO05D005775 3.2e-33 146.0 258 35.7
Psat0s2305g0080 Pisum sativum HOM05D004500 ORTHO05D005775 3.2e-33 146.0 151 47.7
CSS0026558 Camellia sinensis var. sinensis HOM05D004500 ORTHO05D005775 4.2e-33 145.6 153 46.4
CAN.G1050.5 Capsicum annuum HOM05D004500 ORTHO05D005775 4.2e-33 145.6 258 36.8
Gohir.D09G105200 Gossypium hirsutum HOM05D004500 ORTHO05D005775 4.2e-33 145.6 256 35.9
Thecc.09G254300 Theobroma cacao HOM05D004500 ORTHO05D005775 4.2e-33 145.6 256 36.3
Carub.0004s0721 Capsella rubella HOM05D004500 ORTHO05D005775 5.5e-33 145.2 258 36.8
MELO3C014542.2 Cucumis melo HOM05D004500 ORTHO05D005775 7.2e-33 144.8 258 37.2
Duzib168G0672 Durio zibethinus HOM05D004500 ORTHO05D005775 7.2e-33 144.8 153 44.4
Gorai.006G122400 Gossypium raimondii HOM05D004500 ORTHO05D005775 1.6e-32 143.7 256 35.5
QL01p016442 Quercus lobata HOM05D004500 ORTHO05D005775 1.6e-32 143.7 258 36.8
Sopen11g024300 Solanum pennellii HOM05D004500 ORTHO05D005775 1.6e-32 143.7 258 36.4
vmacro04081 Vaccinium macrocarpon HOM05D004500 ORTHO05D005775 1.6e-32 143.7 244 38.1
Haze_23271 Corylus avellana HOM05D004500 ORTHO05D005775 2.1e-32 143.3 258 36.0
Solyc11g062310.2 Solanum lycopersicum HOM05D004500 ORTHO05D005775 2.1e-32 143.3 258 36.4
TWI75G0701 Tripterygium wilfordii HOM05D004500 ORTHO05D005775 2.1e-32 143.3 153 45.8
CsaV3_6G038790 Cucumis sativus L. HOM05D004500 ORTHO05D005775 2.7e-32 142.9 258 36.8
Eucgr.J00673 Eucalyptus grandis HOM05D004500 ORTHO05D005775 3.6e-32 142.5 258 36.4
THA.LOC104800461 Tarenaya hassleriana HOM05D004500 ORTHO05D005775 3.6e-32 142.5 258 35.7
Ah.06g194800 Amaranthus hybridus HOM05D004500 ORTHO05D005775 4.7e-32 142.1 258 36.0
C03p92100 Brassica napus HOM05D004500 ORTHO05D005775 4.7e-32 142.1 264 37.1
Peaxi162Scf00029g02524 Petunia axillaris HOM05D004500 ORTHO05D005775 4.7e-32 142.1 258 35.7
Os12g0134200 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 6.1e-32 141.7 153 45.1
Cpa.g.sc34.185 Carica papaya HOM05D004500 ORTHO05D005775 8.0e-32 141.4 258 35.3
Cc01_g06520 Coffea canephora HOM05D004500 ORTHO05D005775 8.0e-32 141.4 258 35.7
A08p01100 Brassica napus HOM05D004500 ORTHO05D005775 1.0e-31 141.0 261 36.8
FAN21G1747 Fragaria x ananassa HOM05D004500 ORTHO05D005775 1.0e-31 141.0 153 45.8
EL10Ac4g10085 Beta vulgaris HOM05D004500 ORTHO05D005775 1.4e-31 140.6 258 34.9
DCAR_023834 Daucus carota HOM05D004500 ORTHO05D005775 1.4e-31 140.6 151 47.7
Oeu061692.5 Olea europaea HOM05D004500 ORTHO05D005775 1.4e-31 140.6 244 36.9
ClCG02G022670 Citrullus lanatus HOM05D004500 ORTHO05D005775 1.8e-31 140.2 258 36.8
FAN11G1622 Fragaria x ananassa HOM05D004500 ORTHO05D005775 1.8e-31 140.2 153 45.8
Manes.02G138300 Manihot esculenta HOM05D004500 ORTHO05D005775 1.8e-31 140.2 153 45.1
Prupe.4G270300 Prunus persica HOM05D004500 ORTHO05D005775 1.8e-31 140.2 258 35.7
FvH4_3g28920 Fragaria vesca HOM05D004500 ORTHO05D005775 2.3e-31 139.8 153 45.8
RcHm_v2.0_Chr5g0051871 Rosa chinensis HOM05D004500 ORTHO05D005775 2.3e-31 139.8 153 45.8
MD03G1157000 Malus domestica HOM05D004500 ORTHO05D005775 3.0e-31 139.4 153 45.1
Sp1g40640 Schrenkiella parvula HOM05D004500 ORTHO05D005775 5.2e-31 138.7 153 44.4
Sed0001243 Sechium edule HOM05D004500 ORTHO05D005775 5.2e-31 138.7 258 36.0
CiPaw.13G147900 Carya illinoinensis HOM05D004500 ORTHO05D005775 6.7e-31 138.3 153 45.8
Medtr5g089000 Medicago truncatula HOM05D004500 ORTHO05D005775 6.7e-31 138.3 256 36.7
FAN25G3650 Fragaria x ananassa HOM05D004500 ORTHO05D005775 1.2e-30 137.5 153 44.4
Nitab4.5_0002026g0140 Nicotiana tabacum HOM05D004500 ORTHO05D005775 1.2e-30 137.5 258 35.3
Nitab4.5_0000492g0190 Nicotiana tabacum HOM05D004500 ORTHO05D005775 1.5e-30 137.1 258 35.3
SalBow6G2693 Salvia bowleyana HOM05D004500 ORTHO05D005775 2.6e-30 136.3 262 34.4
RcHm_v2.0_Chr5g0051931 Rosa chinensis HOM05D004500 ORTHO05D005775 4.4e-30 135.6 153 45.1
Lsat_1_v5_gn_5_70881 Lactuca sativa HOM05D004500 ORTHO05D005775 5.7e-30 135.2 153 41.8
AUR62000221 Chenopodium quinoa HOM05D004500 ORTHO05D005775 9.7e-30 134.4 153 45.1
Zm00001eb196280 Zea mays HOM05D004500 ORTHO05D005775 1.3e-29 134.0 153 44.4
AUR62006566 Chenopodium quinoa HOM05D004500 ORTHO05D005775 2.2e-29 133.3 153 44.4
HanXRQChr12g0380331 Helianthus annuus HOM05D004500 ORTHO05D005775 2.2e-29 133.3 153 41.2
AagrBONN_evm.TU.Sc2ySwM_117.694 Anthoceros agrestis HOM05D004500 ORTHO05D005775 2.8e-29 132.9 256 33.6
ECA233G3879 Erigeron canadensis HOM05D004500 ORTHO05D005775 3.7e-29 132.5 153 41.2
Lj1C1068G11 Lonicera japonica HOM05D004500 ORTHO05D005775 8.2e-29 131.3 153 45.1
CBR_g37490 Chara braunii HOM05D004500 ORTHO05D005775 1.1e-28 131.0 248 34.7
Sc09g0001130 Simmondsia chinensis HOM05D004500 ORTHO05D005775 1.4e-28 130.6 258 34.1
Hund07422 Selenicereus undatus HOM05D004500 ORTHO05D005775 4.1e-28 129.0 258 35.7
Mapoly0009s0155 Marchantia polymorpha HOM05D004500 ORTHO05D005775 5.3e-28 128.6 256 37.9
SGA_v2.0_scaffold29G12209 Striga asiatica HOM05D004500 ORTHO05D005775 1.6e-27 127.1 239 34.3
SMO228G0054 Selaginella moellendorffii HOM05D004500 ORTHO05D005775 4.5e-27 125.6 258 34.9
unitig_578.g16660 Utricularia gibba HOM05D004500 ORTHO05D005775 2.0e-22 110.2 118 46.6
BolC3t21527H Brassica oleracea HOM05D004500 ORTHO05D005775 4.1e-20 102.4 216 33.8
BraA08t32166Z Brassica rapa HOM05D004500 ORTHO05D005775 7.0e-20 101.7 216 33.8
MELO3C035575.2 Cucumis melo HOM05D004500 ORTHO05D005775 1.7e-13 80.5 77 48.1
MELO3C032687.2 Cucumis melo HOM05D004500 ORTHO05D005775 1.8e-12 77.0 66 56.1
MELO3C033637.2 Cucumis melo HOM05D007110 ORTHO05D000233 1.3e-10 70.9 68 50.0
MCO04G062 Micromonas commoda HOM05D004500 ORTHO05D005775 1.7e-10 70.5 151 30.5
Cre04.g217942 Chlamydomonas reinhardtii HOM05D004500 ORTHO05D005775 8.9e-07 58.2 104 31.7
PRCOL_00001646 Prasinoderma coloniale HOM05D004500 ORTHO05D005775 8.9e-07 58.2 147 27.2
HPP92_022831 Vanilla planifolia HOM05D004500 ORTHO05D005775 4.4e-06 55.8 48 52.1


User provided reference genes

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